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The map label for this gene is yrdA [H]

Identifier: 34496330

GI number: 34496330

Start: 902736

End: 903281

Strand: Reverse

Name: yrdA [H]

Synonym: CV_0875

Alternate gene names: 34496330

Gene position: 903281-902736 (Counterclockwise)

Preceding gene: 34496341

Following gene: 34496329

Centisome position: 19.01

GC content: 65.38

Gene sequence:

>546_bases
ATGAAAAGCAATATCCGCCAGTACGACGGCCACCATCCGGAGATCGCGGACGGCTGTTACATCGACCCGGCTGCCGTGGT
CATCGGCGAGGTGAAACTGGAGACTGGCGCTTCGGTCTGGCCGTGCGCGGTGATCCGCGGCGACGTCAACCGCATCCACG
TCGGCGAGAACAGCAATGTGCAGGACCACGCCATGTTGCACGTCAGCCACAGAAGCGCCGCCGATCCGGAGGGCGCGCCG
CTGATCATCGGCCGCCACGTCACCATCGGCCACCACGTGACGCTGCACGGCTGCACCATAGGGGACGAGGTGCTGATCGG
CATCGGCAGCATCGTGCTGGACCGCGCGGTGATCGAGGACCGGGTGCTGATCGGCGCCGGCAGCCTGGTGCCGCCGGGCA
AGCGGCTGCAGTCCGGCTACCTGTACCTGGGCAATCCGGTCAAGCAGGCGCGGCCGCTGACCGACAAGGAGCTGGCCTAC
TTCAAATACTCGGCCGAGCACTATCTGCGCGTGGCCGACAAGCACAAGGTCAATCTGGAGGATTGA

Upstream 100 bases:

>100_bases
CTTCAACATCCTGTCGGGGCGGACCAATTATGATAAGGGAATTTGCGCGCCGGCGCGCGCGGCCGGCACAATGCATGCTC
CCAGAGATAAGGACGAAACG

Downstream 100 bases:

>100_bases
GCGATGGCGGATGTACCGGAAATCCATGAACAAGAGCTGGAATACGTCGGTTTCTGGGCCAGGGTGCTGGCCAGCCTGGC
CGACACCATTCTGCTGCTGA

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKSNIRQYDGHHPEIADGCYIDPAAVVIGEVKLETGASVWPCAVIRGDVNRIHVGENSNVQDHAMLHVSHRSAADPEGAP
LIIGRHVTIGHHVTLHGCTIGDEVLIGIGSIVLDRAVIEDRVLIGAGSLVPPGKRLQSGYLYLGNPVKQARPLTDKELAY
FKYSAEHYLRVADKHKVNLED

Sequences:

>Translated_181_residues
MKSNIRQYDGHHPEIADGCYIDPAAVVIGEVKLETGASVWPCAVIRGDVNRIHVGENSNVQDHAMLHVSHRSAADPEGAP
LIIGRHVTIGHHVTLHGCTIGDEVLIGIGSIVLDRAVIEDRVLIGAGSLVPPGKRLQSGYLYLGNPVKQARPLTDKELAY
FKYSAEHYLRVADKHKVNLED
>Mature_181_residues
MKSNIRQYDGHHPEIADGCYIDPAAVVIGEVKLETGASVWPCAVIRGDVNRIHVGENSNVQDHAMLHVSHRSAADPEGAP
LIIGRHVTIGHHVTLHGCTIGDEVLIGIGSIVLDRAVIEDRVLIGAGSLVPPGKRLQSGYLYLGNPVKQARPLTDKELAY
FKYSAEHYLRVADKHKVNLED

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=53.7142857142857, Blast_Score=202, Evalue=8e-54,
Organism=Escherichia coli, GI1787667, Length=175, Percent_Identity=34.8571428571429, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI87081681, Length=174, Percent_Identity=31.0344827586207, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19703; Mature: 19703

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNIRQYDGHHPEIADGCYIDPAAVVIGEVKLETGASVWPCAVIRGDVNRIHVGENSNV
CCCCCCCCCCCCCCCCCCCEECCHHEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCC
QDHAMLHVSHRSAADPEGAPLIIGRHVTIGHHVTLHGCTIGDEVLIGIGSIVLDRAVIED
CCEEEEEEECCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCHHEEEHHHHHHHHHHHHC
RVLIGAGSLVPPGKRLQSGYLYLGNPVKQARPLTDKELAYFKYSAEHYLRVADKHKVNLE
EEEEECCCCCCCCHHHCCCEEEECCCHHHCCCCCCCCEEEEEECHHHEEEECCCEEECCC
D
C
>Mature Secondary Structure
MKSNIRQYDGHHPEIADGCYIDPAAVVIGEVKLETGASVWPCAVIRGDVNRIHVGENSNV
CCCCCCCCCCCCCCCCCCCEECCHHEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCC
QDHAMLHVSHRSAADPEGAPLIIGRHVTIGHHVTLHGCTIGDEVLIGIGSIVLDRAVIED
CCEEEEEEECCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCHHEEEHHHHHHHHHHHHC
RVLIGAGSLVPPGKRLQSGYLYLGNPVKQARPLTDKELAYFKYSAEHYLRVADKHKVNLE
EEEEECCCCCCCCHHHCCCEEEECCCHHHCCCCCCCCEEEEEECHHHEEEECCCEEECCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]