| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496295
Identifier: 34496295
GI number: 34496295
Start: 872003
End: 873352
Strand: Reverse
Name: 34496295
Synonym: CV_0840
Alternate gene names: NA
Gene position: 873352-872003 (Counterclockwise)
Preceding gene: 34496297
Following gene: 34496293
Centisome position: 18.38
GC content: 66.74
Gene sequence:
>1350_bases GTGGCAGCCGAAGCGCTCCAGGATGCGGAATCCGCCGTCCCTGCCGCATTGGGCCAGGAAGCAGCTGACCGCGGCGTGGT GGCTGGCGGCGTCCATCACCACCGTGCCCTGAGGCCCATTGACGATGACGTACTCCAGCGCGGCCAGCAGCTTGTCGGTC TCCAGCGAGCCGGCCGCCCTGGCGGCCTGGGCGAAGGCATGCACGCACAGGTAGGCCCCCTCGCCGAAGTTGGTCAGCAA GCCATTGCCTTGCGGCCACAGGCCGTCGACGCCGGGCCGGCGCGCCAGCGCCGCCAGCAGCCGCCGGTTGCGCGCGGTGT CCACCGACATGAAATAGGTGTTGCAGCCGTACAGGCCTTCCCGCGCGTCTTCCGGCAGCAAGCTGGCCATCAGGTCGTCG AAGTGGCCCATCACCGCCGCCATCTGCCGCTTCAGGCCGCGTTCGGCGAAGCGCTTCAGCACCGCGATCTGGTTGGCGCC GGCGAAATAGGGCACGAAGACGTCGGCGCCCGACTGCCTCACCTCGTCCAGCATGGCGTCGATCTCGCGGGCATCCGCGT CGAACGGCAGGTAAACCTCGCCCACAGGCTCGCCGCCGACGCGGATCAGCGCCCGCTTGGCGGCATCGATGGAGCCGCGC GGCCATTCGTAGTTGTTGCCGGCGAAGAACATCTTCTGCCCCAGCCGCGAGGCGGCCCAGGCGATCATCTTGTCTATCTG CTGATTGGGCAGCGCGGAAAAATGGAAGAAATAGCGCGAGGCGATGCCGCCGGCGTAGAAAGCGAAATTGAGATAGGGCA CCCGGCGCTGGCCGGCCACCTTGTCCGCCACCGCGATGCGGGAGTGGGTCAGCAGGTTGCCTATCAGCGCCGCGCAGCCG GAAAAGTCCACCAGGCCCAATGCCGCCGGCACCGCGCTGGCCGGGAAGCTGCCGTCGTCCGCCGACACCAGCTCCAACGG CAGCCCCAGCACGCCGCCCTCGGCGTTCACCTCGTCGCAGGCGATGGACGCGGCGCGGATGATTTCCTCGCCGTACATGC CCACCAGGCCGCTCAGCGGCGCCAGCAATCCCAGCCTGATGGTATCCCCGGACGCCTGCCCCGCGCTGTCATCCATGCGC ATCCCCGCCGCTCCTCCTGTGGCGTGCGGCGCGGCCCGCTGCCGGCATTTGTTTTATCTAGTAAATTTTCACCATCACGC GATTTCAGCCTAGTTGAGACATCGCCTCCCCCACGTTGCGCCAGATCAAGGGTTTCGCCTGCCCGCGCGCGCGAACTAAT AAATAACCAACGCTTTGAAATGCATCGGAAGATTTCTGCCATTCCACGCCATGCGCGCCAGGCAGGATGA
Upstream 100 bases:
>100_bases AATCGATGCCTTCGGCGGAATGGCTCCGGCTCCGGGGGGAAGCCTGGCTGGACGGAACCGGCGCCGCAGCCTGGACGTAG CGTTCCGGCATCATCGGCGC
Downstream 100 bases:
>100_bases GCTGGCCGCCGGCCAGATCTTGCTCCAGAAGCGACATGAAAAAACCGCGCCCATCAACGCGGTTTGCTTTTTCCGCTGCG AGGCTATGCTCGGCGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MAAEALQDAESAVPAALGQEAADRGVVAGGVHHHRALRPIDDDVLQRGQQLVGLQRAGRPGGLGEGMHAQVGPLAEVGQQ AIALRPQAVDAGPARQRRQQPPVARGVHRHEIGVAAVQAFPRVFRQQAGHQVVEVAHHRRHLPLQAAFGEALQHRDLVGA GEIGHEDVGARLPHLVQHGVDLAGIRVERQVNLAHRLAADADQRPLGGIDGAARPFVVVAGEEHLLPQPRGGPGDHLVYL LIGQRGKMEEIARGDAAGVESEIEIGHPALAGHLVRHRDAGVGQQVAYQRRAAGKVHQAQCRRHRAGREAAVVRRHQLQR QPQHAALGVHLVAGDGRGADDFLAVHAHQAAQRRQQSQPDGIPGRLPRAVIHAHPRRSSCGVRRGPLPAFVLSSKFSPSR DFSLVETSPPPRCARSRVSPARARELINNQRFEMHRKISAIPRHARQAG
Sequences:
>Translated_449_residues MAAEALQDAESAVPAALGQEAADRGVVAGGVHHHRALRPIDDDVLQRGQQLVGLQRAGRPGGLGEGMHAQVGPLAEVGQQ AIALRPQAVDAGPARQRRQQPPVARGVHRHEIGVAAVQAFPRVFRQQAGHQVVEVAHHRRHLPLQAAFGEALQHRDLVGA GEIGHEDVGARLPHLVQHGVDLAGIRVERQVNLAHRLAADADQRPLGGIDGAARPFVVVAGEEHLLPQPRGGPGDHLVYL LIGQRGKMEEIARGDAAGVESEIEIGHPALAGHLVRHRDAGVGQQVAYQRRAAGKVHQAQCRRHRAGREAAVVRRHQLQR QPQHAALGVHLVAGDGRGADDFLAVHAHQAAQRRQQSQPDGIPGRLPRAVIHAHPRRSSCGVRRGPLPAFVLSSKFSPSR DFSLVETSPPPRCARSRVSPARARELINNQRFEMHRKISAIPRHARQAG >Mature_448_residues AAEALQDAESAVPAALGQEAADRGVVAGGVHHHRALRPIDDDVLQRGQQLVGLQRAGRPGGLGEGMHAQVGPLAEVGQQA IALRPQAVDAGPARQRRQQPPVARGVHRHEIGVAAVQAFPRVFRQQAGHQVVEVAHHRRHLPLQAAFGEALQHRDLVGAG EIGHEDVGARLPHLVQHGVDLAGIRVERQVNLAHRLAADADQRPLGGIDGAARPFVVVAGEEHLLPQPRGGPGDHLVYLL IGQRGKMEEIARGDAAGVESEIEIGHPALAGHLVRHRDAGVGQQVAYQRRAAGKVHQAQCRRHRAGREAAVVRRHQLQRQ PQHAALGVHLVAGDGRGADDFLAVHAHQAAQRRQQSQPDGIPGRLPRAVIHAHPRRSSCGVRRGPLPAFVLSSKFSPSRD FSLVETSPPPRCARSRVSPARARELINNQRFEMHRKISAIPRHARQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48366; Mature: 48234
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEALQDAESAVPAALGQEAADRGVVAGGVHHHRALRPIDDDVLQRGQQLVGLQRAGRP CCHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC GGLGEGMHAQVGPLAEVGQQAIALRPQAVDAGPARQRRQQPPVARGVHRHEIGVAAVQAF CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHH PRVFRQQAGHQVVEVAHHRRHLPLQAAFGEALQHRDLVGAGEIGHEDVGARLPHLVQHGV HHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC DLAGIRVERQVNLAHRLAADADQRPLGGIDGAARPFVVVAGEEHLLPQPRGGPGDHLVYL CEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCEEEEE LIGQRGKMEEIARGDAAGVESEIEIGHPALAGHLVRHRDAGVGQQVAYQRRAAGKVHQAQ EECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHH CRRHRAGREAAVVRRHQLQRQPQHAALGVHLVAGDGRGADDFLAVHAHQAAQRRQQSQPD HHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC GIPGRLPRAVIHAHPRRSSCGVRRGPLPAFVLSSKFSPSRDFSLVETSPPPRCARSRVSP CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHCCCH ARARELINNQRFEMHRKISAIPRHARQAG HHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAEALQDAESAVPAALGQEAADRGVVAGGVHHHRALRPIDDDVLQRGQQLVGLQRAGRP CHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC GGLGEGMHAQVGPLAEVGQQAIALRPQAVDAGPARQRRQQPPVARGVHRHEIGVAAVQAF CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHH PRVFRQQAGHQVVEVAHHRRHLPLQAAFGEALQHRDLVGAGEIGHEDVGARLPHLVQHGV HHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC DLAGIRVERQVNLAHRLAADADQRPLGGIDGAARPFVVVAGEEHLLPQPRGGPGDHLVYL CEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCEEEEE LIGQRGKMEEIARGDAAGVESEIEIGHPALAGHLVRHRDAGVGQQVAYQRRAAGKVHQAQ EECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHH CRRHRAGREAAVVRRHQLQRQPQHAALGVHLVAGDGRGADDFLAVHAHQAAQRRQQSQPD HHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC GIPGRLPRAVIHAHPRRSSCGVRRGPLPAFVLSSKFSPSRDFSLVETSPPPRCARSRVSP CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHCCCH ARARELINNQRFEMHRKISAIPRHARQAG HHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA