| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496189
Identifier: 34496189
GI number: 34496189
Start: 755916
End: 756710
Strand: Reverse
Name: 34496189
Synonym: CV_0734
Alternate gene names: NA
Gene position: 756710-755916 (Counterclockwise)
Preceding gene: 34496190
Following gene: 34496188
Centisome position: 15.93
GC content: 67.8
Gene sequence:
>795_bases ATGCTGCTCCATTTCATCTCCCTGCCCTCGTCGGCGCAAATCGCCTTGTGGGCCGCGTCCGGCTGCGCCTGCGCCGCGCT GGTCCACCTGCTGCTGCGCAAGCTGGCGCCTGACCACGTCACCCAGAAGCAGAGCGACGAAGTGGGCGTCATCATCGCCG TGGTCGGCATCTTCTACGGCCTGATCATCGCCGCGCTGCTGGTGCGGGCGATCAACCACTTCGACGCCTCCTCCGACATC GTCGAGCGCGAGGCCGAGCTGGCCGGCTCGCTCTACCGGATGAGCGCCCAGGGCCTGCCCTCGGCGCGCCAGCCGGTGAA GGACAATCTGCTGGCCTATCTGGACGCCGTCGTCAGCCGGGAATGGCCGCTGCAGCAAAAGGGGGAAGAGGTGCCGGCCG GCTCGCCCGAACTGGGCCGGCTCAGCCGGGCGCTGGCCGCCGTCCACCCTGCAGACCGGCGCGAGGCGGAATACCTGAGC CTGGCGCAGAACCAGCTCAACGGCCTGTACGCCAGCCGGCATGCGCGGCTGTCCGACCAGGCGATGACCATCCCCCTGGA CATCTGGTGGGTCAGCCTGATCGGCGAGGTGCTGCTGATCTTCTTCGCCTGGCTGATGCACGTGCCCAGCAAGGCCGTGC ACTTCTTCCTCACCTGCGCGATGGCCGCCTCCATCTCCATCGTGCTCGCCATCATCCTGATCTACGACACCCCGTTCTAC GGCGACATCAGCGTGTCGCCGGAACCGTACCGCAAAACGCTGCGCGCCATCCGCGCCGACAGCCTGGACGGCTGA
Upstream 100 bases:
>100_bases GCCGTCCCGCCCCCGGCTGGCGCCAACAGTTGATCCCGCCGCGCGGCGCCCGCCCATGCGTCGCCGCGCGTCTCCTCAAG GCCGCCACAGGATGAACACC
Downstream 100 bases:
>100_bases GCCGCGAAAACCCATCGGCCCCGTTCACGCGCCGGCCGCCGCCGCGTCCATAGGGCAAGCGCTCGCCAGCGCCCTCTTCC CCCCATTCGCGATCCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLLHFISLPSSAQIALWAASGCACAALVHLLLRKLAPDHVTQKQSDEVGVIIAVVGIFYGLIIAALLVRAINHFDASSDI VEREAELAGSLYRMSAQGLPSARQPVKDNLLAYLDAVVSREWPLQQKGEEVPAGSPELGRLSRALAAVHPADRREAEYLS LAQNQLNGLYASRHARLSDQAMTIPLDIWWVSLIGEVLLIFFAWLMHVPSKAVHFFLTCAMAASISIVLAIILIYDTPFY GDISVSPEPYRKTLRAIRADSLDG
Sequences:
>Translated_264_residues MLLHFISLPSSAQIALWAASGCACAALVHLLLRKLAPDHVTQKQSDEVGVIIAVVGIFYGLIIAALLVRAINHFDASSDI VEREAELAGSLYRMSAQGLPSARQPVKDNLLAYLDAVVSREWPLQQKGEEVPAGSPELGRLSRALAAVHPADRREAEYLS LAQNQLNGLYASRHARLSDQAMTIPLDIWWVSLIGEVLLIFFAWLMHVPSKAVHFFLTCAMAASISIVLAIILIYDTPFY GDISVSPEPYRKTLRAIRADSLDG >Mature_264_residues MLLHFISLPSSAQIALWAASGCACAALVHLLLRKLAPDHVTQKQSDEVGVIIAVVGIFYGLIIAALLVRAINHFDASSDI VEREAELAGSLYRMSAQGLPSARQPVKDNLLAYLDAVVSREWPLQQKGEEVPAGSPELGRLSRALAAVHPADRREAEYLS LAQNQLNGLYASRHARLSDQAMTIPLDIWWVSLIGEVLLIFFAWLMHVPSKAVHFFLTCAMAASISIVLAIILIYDTPFY GDISVSPEPYRKTLRAIRADSLDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28866; Mature: 28866
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLHFISLPSSAQIALWAASGCACAALVHLLLRKLAPDHVTQKQSDEVGVIIAVVGIFYG CEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHH LIIAALLVRAINHFDASSDIVEREAELAGSLYRMSAQGLPSARQPVKDNLLAYLDAVVSR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC EWPLQQKGEEVPAGSPELGRLSRALAAVHPADRREAEYLSLAQNQLNGLYASRHARLSDQ CCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC AMTIPLDIWWVSLIGEVLLIFFAWLMHVPSKAVHFFLTCAMAASISIVLAIILIYDTPFY CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GDISVSPEPYRKTLRAIRADSLDG CCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLHFISLPSSAQIALWAASGCACAALVHLLLRKLAPDHVTQKQSDEVGVIIAVVGIFYG CEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHH LIIAALLVRAINHFDASSDIVEREAELAGSLYRMSAQGLPSARQPVKDNLLAYLDAVVSR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC EWPLQQKGEEVPAGSPELGRLSRALAAVHPADRREAEYLSLAQNQLNGLYASRHARLSDQ CCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC AMTIPLDIWWVSLIGEVLLIFFAWLMHVPSKAVHFFLTCAMAASISIVLAIILIYDTPFY CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GDISVSPEPYRKTLRAIRADSLDG CCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA