| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496187
Identifier: 34496187
GI number: 34496187
Start: 754928
End: 755542
Strand: Reverse
Name: 34496187
Synonym: CV_0732
Alternate gene names: NA
Gene position: 755542-754928 (Counterclockwise)
Preceding gene: 34496188
Following gene: 34496186
Centisome position: 15.9
GC content: 67.48
Gene sequence:
>615_bases ATGCCCTTCCCCAACTTCAAAAACCTGTTCGGCGACAAACCGGCCGCCGGCCAGGACGGCGCCCAGGCCAAGTCGGACCC GCCGGCGGCATCCGCCGCAAAGAACGGCCCGGCCCAGCCCCCCGGACCGCCGCCCGCGCCGCCGTCGTCCAGCCCGCTGA ACAGCTTCACCAGCCAGCTGAAAACCGCGCCGGACGGCAACCCGGACACCAGCGCGCTCAACAGCCAGATCGTGCAGGCG GTGCAGCTCAGCAACAGCGAAACCGCCGCCTACGCCGGCAGCCAGATCGCCGTCGCGCCCAACATGATGATCAGCCAGGC CGGCGGCCTGGTGGCGCAGGCCGGCGCCAACTACTTCGACAGCGCGAGCAAGCTGGCGCTGGCCAGCAAGAGCGTGCTGC TGAAGGACATGACCGAGAAATTCGCCAAGCAAGATCTGAAGGGCGCTGCCGAGGACGCGCTGGGGGTGCTGATCACCGAC CTATTGGTCGGCACCGCGGCGGCGGTGGCGGCGGCGGCCGGCGCGATGGAGGGCGAGGCCGCGCATTTCGCCTTGGACAA GATTGATCAAAGTTTGACCAAGTACCAAGCCTTACTCAACCAGCAGCATCACTGA
Upstream 100 bases:
>100_bases AACCAGATCTCCAGCGCGGTGATTTCCAAAGCGGTGTCGATGATCCTGTCCATCGGCGAGAAAAGCAGCTGAGCCGCCAT CCTCCACGGAGAGCTAGATC
Downstream 100 bases:
>100_bases TCTCCCATTGAGACTCTTCGCATTCACCACCAAGGCCTATCGGATGAACAGGCCATCAAAACCAGGAGGACATCATGAGC GAAATTAATACTTTAGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPFPNFKNLFGDKPAAGQDGAQAKSDPPAASAAKNGPAQPPGPPPAPPSSSPLNSFTSQLKTAPDGNPDTSALNSQIVQA VQLSNSETAAYAGSQIAVAPNMMISQAGGLVAQAGANYFDSASKLALASKSVLLKDMTEKFAKQDLKGAAEDALGVLITD LLVGTAAAVAAAAGAMEGEAAHFALDKIDQSLTKYQALLNQQHH
Sequences:
>Translated_204_residues MPFPNFKNLFGDKPAAGQDGAQAKSDPPAASAAKNGPAQPPGPPPAPPSSSPLNSFTSQLKTAPDGNPDTSALNSQIVQA VQLSNSETAAYAGSQIAVAPNMMISQAGGLVAQAGANYFDSASKLALASKSVLLKDMTEKFAKQDLKGAAEDALGVLITD LLVGTAAAVAAAAGAMEGEAAHFALDKIDQSLTKYQALLNQQHH >Mature_203_residues PFPNFKNLFGDKPAAGQDGAQAKSDPPAASAAKNGPAQPPGPPPAPPSSSPLNSFTSQLKTAPDGNPDTSALNSQIVQAV QLSNSETAAYAGSQIAVAPNMMISQAGGLVAQAGANYFDSASKLALASKSVLLKDMTEKFAKQDLKGAAEDALGVLITDL LVGTAAAVAAAAGAMEGEAAHFALDKIDQSLTKYQALLNQQHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20667; Mature: 20536
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPNFKNLFGDKPAAGQDGAQAKSDPPAASAAKNGPAQPPGPPPAPPSSSPLNSFTSQL CCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH KTAPDGNPDTSALNSQIVQAVQLSNSETAAYAGSQIAVAPNMMISQAGGLVAQAGANYFD HCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHCCHHHHHCCCHHH SASKLALASKSVLLKDMTEKFAKQDLKGAAEDALGVLITDLLVGTAAAVAAAAGAMEGEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AHFALDKIDQSLTKYQALLNQQHH HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PFPNFKNLFGDKPAAGQDGAQAKSDPPAASAAKNGPAQPPGPPPAPPSSSPLNSFTSQL CCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH KTAPDGNPDTSALNSQIVQAVQLSNSETAAYAGSQIAVAPNMMISQAGGLVAQAGANYFD HCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHCCHHHHHCCCHHH SASKLALASKSVLLKDMTEKFAKQDLKGAAEDALGVLITDLLVGTAAAVAAAAGAMEGEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AHFALDKIDQSLTKYQALLNQQHH HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA