| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is phaZ2
Identifier: 34496184
GI number: 34496184
Start: 751672
End: 752727
Strand: Reverse
Name: phaZ2
Synonym: CV_0729
Alternate gene names: NA
Gene position: 752727-751672 (Counterclockwise)
Preceding gene: 34496185
Following gene: 34496183
Centisome position: 15.84
GC content: 67.05
Gene sequence:
>1056_bases ATGCGCGTCACCCGCATCTCTCGCCGCCGTCTGGCCGCCCTGCTACTCGCCGCCGCCTGCGGCCAGGCGGCCGCCGCCGC TCCGCCGCTGCCCGCGCTGGGCGCCGATCCCAAGCAGAACACCGTCTCCGGACTGTCCTCCGGCGCCTTCATGGCCGCCC AGTTCAGCGTCGCCCACTCGGCCCGCGTGGCCGGCGCCGGCATCGTCGCCGGCGGGCCGTTCTATTGCGCCGGCTTGGGC GGCCTGAACGGACCGGAACGCTTCCTGACCACCGCCACCACCCAGTGCATGCGCCCGTTGGGCGCGGCCCCATCCGGCGC GGCAGCCTGGCAGGCGGCGCAAAAGTTCGCCCAGCAGAAACTGATAGACCCGGTGGACAACATCAAGCGGCAGCGGCTGT ACATCTTCACCGGCGCGTCGGACAGCATCGTGCTGCCAAAAGTGGTGGCCCAGACACGGGCCTTCTACCAGAGCGCCGGC GTGCCCGACTCGCAGATCCGCTATATCGACAACGTCAACGCCGGCCACGCGCTGATCACCGCCAACGCCACAGACCTGAA ATGCCCAGCCAACGCCGCGCCCAATCTCAACAACTGCGGCTTCGTCCAGTCGCATGACATCCTGCGCCAACTGTACGGGC AGTTGAAGCCGCCCGCGGCCAAACTGTCCGGCCAACTGAAGGATTTCGACCAGACCGAGTTCTCCAAGACAGGGTATACA GGGCTGTCCGACACCGGCCATGTCTACATTCCGGCCGCCTGCGCCAAGGACAGCTGCCGCGTGCACGTGGCCTTCCACGG CTGCACCCAGGAAGACCGCCGCATCGGCAACCGCTTCTACGCCACCACCGGTTACAACGAGATCGCCGACAGCAACCGCA TCGTGGTGCTGTATCCGCAGATCCGCACCGATCCCAAGCGCAACCCGCAAGGCTGCTGGGACTTCTGGGGCTACAGCAGC AAGGATCCGGCCAATCCCGACTACTACGCCAAGCACGCGCCGCAGATGTCCGCCATCCGCGCGATGCTCGACCGCCTGAA CAGCCACCGCAAATAA
Upstream 100 bases:
>100_bases GGCTCCACCGAGCTGGGGCTGCTGTTCATCGGCTGGTCCGGCATCAACGAGCTGCAAAAGATGGACAAATAAACCTTCAC TCACGCAAGGAGAACCCGCA
Downstream 100 bases:
>100_bases GGAGCAAGCCATGGATCCCCAATTCCTGTCCGACTGGTTGCGGAGCCTCGACGACGGCTGGCAACGGCTGGCAGAGGCCG GCCTGCCCGATGAGCGGGCG
Product: poly (3-hydroxybutyrate) depolymerase
Products: NA
Alternate protein names: Depolymerase; Polyhydroxybutyrate Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Fibronectin Type III Domain-Containing Protein; PHB Depolymerase; Poly Depolymerase Protein; Fibronectin Type III Domain Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MRVTRISRRRLAALLLAAACGQAAAAAPPLPALGADPKQNTVSGLSSGAFMAAQFSVAHSARVAGAGIVAGGPFYCAGLG GLNGPERFLTTATTQCMRPLGAAPSGAAAWQAAQKFAQQKLIDPVDNIKRQRLYIFTGASDSIVLPKVVAQTRAFYQSAG VPDSQIRYIDNVNAGHALITANATDLKCPANAAPNLNNCGFVQSHDILRQLYGQLKPPAAKLSGQLKDFDQTEFSKTGYT GLSDTGHVYIPAACAKDSCRVHVAFHGCTQEDRRIGNRFYATTGYNEIADSNRIVVLYPQIRTDPKRNPQGCWDFWGYSS KDPANPDYYAKHAPQMSAIRAMLDRLNSHRK
Sequences:
>Translated_351_residues MRVTRISRRRLAALLLAAACGQAAAAAPPLPALGADPKQNTVSGLSSGAFMAAQFSVAHSARVAGAGIVAGGPFYCAGLG GLNGPERFLTTATTQCMRPLGAAPSGAAAWQAAQKFAQQKLIDPVDNIKRQRLYIFTGASDSIVLPKVVAQTRAFYQSAG VPDSQIRYIDNVNAGHALITANATDLKCPANAAPNLNNCGFVQSHDILRQLYGQLKPPAAKLSGQLKDFDQTEFSKTGYT GLSDTGHVYIPAACAKDSCRVHVAFHGCTQEDRRIGNRFYATTGYNEIADSNRIVVLYPQIRTDPKRNPQGCWDFWGYSS KDPANPDYYAKHAPQMSAIRAMLDRLNSHRK >Mature_351_residues MRVTRISRRRLAALLLAAACGQAAAAAPPLPALGADPKQNTVSGLSSGAFMAAQFSVAHSARVAGAGIVAGGPFYCAGLG GLNGPERFLTTATTQCMRPLGAAPSGAAAWQAAQKFAQQKLIDPVDNIKRQRLYIFTGASDSIVLPKVVAQTRAFYQSAG VPDSQIRYIDNVNAGHALITANATDLKCPANAAPNLNNCGFVQSHDILRQLYGQLKPPAAKLSGQLKDFDQTEFSKTGYT GLSDTGHVYIPAACAKDSCRVHVAFHGCTQEDRRIGNRFYATTGYNEIADSNRIVVLYPQIRTDPKRNPQGCWDFWGYSS KDPANPDYYAKHAPQMSAIRAMLDRLNSHRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37686; Mature: 37686
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTRISRRRLAALLLAAACGQAAAAAPPLPALGADPKQNTVSGLSSGAFMAAQFSVAHS CCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHH ARVAGAGIVAGGPFYCAGLGGLNGPERFLTTATTQCMRPLGAAPSGAAAWQAAQKFAQQK HHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LIDPVDNIKRQRLYIFTGASDSIVLPKVVAQTRAFYQSAGVPDSQIRYIDNVNAGHALIT HCCHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEE ANATDLKCPANAAPNLNNCGFVQSHDILRQLYGQLKPPAAKLSGQLKDFDQTEFSKTGYT ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHCCCCCC GLSDTGHVYIPAACAKDSCRVHVAFHGCTQEDRRIGNRFYATTGYNEIADSNRIVVLYPQ CCCCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHCCEEEEECCCHHHCCCCCEEEEECC IRTDPKRNPQGCWDFWGYSSKDPANPDYYAKHAPQMSAIRAMLDRLNSHRK CCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVTRISRRRLAALLLAAACGQAAAAAPPLPALGADPKQNTVSGLSSGAFMAAQFSVAHS CCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHH ARVAGAGIVAGGPFYCAGLGGLNGPERFLTTATTQCMRPLGAAPSGAAAWQAAQKFAQQK HHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LIDPVDNIKRQRLYIFTGASDSIVLPKVVAQTRAFYQSAGVPDSQIRYIDNVNAGHALIT HCCHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEE ANATDLKCPANAAPNLNNCGFVQSHDILRQLYGQLKPPAAKLSGQLKDFDQTEFSKTGYT ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHCCCCCC GLSDTGHVYIPAACAKDSCRVHVAFHGCTQEDRRIGNRFYATTGYNEIADSNRIVVLYPQ CCCCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHCCEEEEECCCHHHCCCCCEEEEECC IRTDPKRNPQGCWDFWGYSSKDPANPDYYAKHAPQMSAIRAMLDRLNSHRK CCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA