| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mmr [H]
Identifier: 34496174
GI number: 34496174
Start: 745904
End: 747289
Strand: Reverse
Name: mmr [H]
Synonym: CV_0719
Alternate gene names: 34496174
Gene position: 747289-745904 (Counterclockwise)
Preceding gene: 34496176
Following gene: 34496173
Centisome position: 15.73
GC content: 73.59
Gene sequence:
>1386_bases ATGCCTCACGCCCAATCGGTCCGGACCGGACTGCCCACCCTGCTGGCGCTCAGCGCCGGCATGTTCATGGCGGTGCTCGA CACCAATATCGTCAATCTGGCGCTGCCGGCCTTGCTGCGCAGCCTGGACGCCAGCCTCAGCCAACTGACCTGGATCGTGG ACGCTTACGCGCTGGGCTTCGCCGGCCTGATGCTCAGCGCCGGCTGGCTGGCCGACCGCTTCGGCCCCCGGCGGATGCTG GCCTGGGGGCTGGCCCTGTTCGTGCTGGCCTCGCTGCTGTGCGGGCTGGCGCCCGGCGCGAGGACGCTGATCCTCTTTCG CTTGCTGCAGGGCATGGCGGCGGCCTTGTTCATTCCCAGCTCGCTCGGCCTGTTGCGCCACGCCTTTCCCCATCCGGCCG AGCGCGCGCGCGCCGTCGGCCTGTACGGCGGCCTGTCCGCCTCGGCCGCCGCGGCCGGCCCGGTGCTGGGCGGCCTGCTG CTGGCGCCGCTGGGCTGGCGCGGCGCCTTCCTGATCAACGTGCCAATCGGTCTGGCCGCGCTGCTGGCCATCCCCTTCGT GGTGCCGCATCGCCAAGCGATGCCGACCCGCGGCGCCGACCTGCCCGGCCAGGCGGCCGGCATGCTGACGCTGCTGCTGG CCAGCTACGCGCTGATCGAAGGCCCGCGCCTGGGCGCGCCCGTCCTGTTCGCCCTGCTGCTGGCGGTCGCCGGCTGCGGC CGCCTGTTCTGGCAGCTGGAAAACGCCAACCCGCAGGCGATGGTGCCGCCCGAGTTGTTCCGCAACCCGGTTTTCGCCGC CGCCAACTGGGTGGGCTTCGCCATCGGCGTCGCCTATTTCGGCACCCTGCTGCTGCTCAGCCTCTACCTGCAGCAAGGCC TGGGCCTGGACGCGCTGCATGCCGGCCTGGCCATGCTGCCGCTGGCCGGATGCCTGATCATCGGCAACGTCGCCGCCGGC CGCCTGCTGCCGCGGTTGGGCGCCCGCCGCCAGATCCGCGGCGGCCTGCTGCTCTCTGCCGCTGGCTATCTGCTGCTGGC CCTCGCCGACGGCCATGCGCTGGCCTGGTCGCTGCTGGCGATGCTGCCGCTGGCGCTGGGCACCGCGCTCGCCATCGCGC CGATGACCGCCACCGTGCTGGAAAGCGCGCCGCCGCATCTGTCCGGCACCGCGTCGGCCGTGCTGAACGCCGTCCGCCAA ACCGGCGCCCTGGTCGGCGCCGCAGGCGCGGCTCTCGCCGTCGGCTATGGCGCCGACCTCCGCCATGCCTTGGCCATCGG ACTCTCCGTCGCCGCGCTGGCCTCGCTCAGCGGCGCGCTCATCGCAGGCTGGATACCGCGGGCGGGCCAGCAGGCTGCGC CGGAACCGGCGCCGGCCGCGCGCTGA
Upstream 100 bases:
>100_bases TTAAAATGCGAAATTGCATCACCATTTATCATATTTGTCTATTTTTTCGCACCATCATCTCGCCTAGCATGGCTGCGTTT TCCACCTGGGGACGCCATTC
Downstream 100 bases:
>100_bases CGACGGGCCGGGGCAGCGGCATGGCCTCGCAGGGCGGGCGATAGCGGGCATCCCTGGCCAAAGGGCTAGCCATGGGACCC CGCGCCGGTCTGCCATACTC
Product: methylenomycin A resistance protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: MMR peptide [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MPHAQSVRTGLPTLLALSAGMFMAVLDTNIVNLALPALLRSLDASLSQLTWIVDAYALGFAGLMLSAGWLADRFGPRRML AWGLALFVLASLLCGLAPGARTLILFRLLQGMAAALFIPSSLGLLRHAFPHPAERARAVGLYGGLSASAAAAGPVLGGLL LAPLGWRGAFLINVPIGLAALLAIPFVVPHRQAMPTRGADLPGQAAGMLTLLLASYALIEGPRLGAPVLFALLLAVAGCG RLFWQLENANPQAMVPPELFRNPVFAAANWVGFAIGVAYFGTLLLLSLYLQQGLGLDALHAGLAMLPLAGCLIIGNVAAG RLLPRLGARRQIRGGLLLSAAGYLLLALADGHALAWSLLAMLPLALGTALAIAPMTATVLESAPPHLSGTASAVLNAVRQ TGALVGAAGAALAVGYGADLRHALAIGLSVAALASLSGALIAGWIPRAGQQAAPEPAPAAR
Sequences:
>Translated_461_residues MPHAQSVRTGLPTLLALSAGMFMAVLDTNIVNLALPALLRSLDASLSQLTWIVDAYALGFAGLMLSAGWLADRFGPRRML AWGLALFVLASLLCGLAPGARTLILFRLLQGMAAALFIPSSLGLLRHAFPHPAERARAVGLYGGLSASAAAAGPVLGGLL LAPLGWRGAFLINVPIGLAALLAIPFVVPHRQAMPTRGADLPGQAAGMLTLLLASYALIEGPRLGAPVLFALLLAVAGCG RLFWQLENANPQAMVPPELFRNPVFAAANWVGFAIGVAYFGTLLLLSLYLQQGLGLDALHAGLAMLPLAGCLIIGNVAAG RLLPRLGARRQIRGGLLLSAAGYLLLALADGHALAWSLLAMLPLALGTALAIAPMTATVLESAPPHLSGTASAVLNAVRQ TGALVGAAGAALAVGYGADLRHALAIGLSVAALASLSGALIAGWIPRAGQQAAPEPAPAAR >Mature_460_residues PHAQSVRTGLPTLLALSAGMFMAVLDTNIVNLALPALLRSLDASLSQLTWIVDAYALGFAGLMLSAGWLADRFGPRRMLA WGLALFVLASLLCGLAPGARTLILFRLLQGMAAALFIPSSLGLLRHAFPHPAERARAVGLYGGLSASAAAAGPVLGGLLL APLGWRGAFLINVPIGLAALLAIPFVVPHRQAMPTRGADLPGQAAGMLTLLLASYALIEGPRLGAPVLFALLLAVAGCGR LFWQLENANPQAMVPPELFRNPVFAAANWVGFAIGVAYFGTLLLLSLYLQQGLGLDALHAGLAMLPLAGCLIIGNVAAGR LLPRLGARRQIRGGLLLSAAGYLLLALADGHALAWSLLAMLPLALGTALAIAPMTATVLESAPPHLSGTASAVLNAVRQT GALVGAAGAALAVGYGADLRHALAIGLSVAALASLSGALIAGWIPRAGQQAAPEPAPAAR
Specific function: Resistance to the epoxide antibiotic methylenomycin A; probably by mediating its efflux [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=423, Percent_Identity=29.5508274231678, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI87081983, Length=428, Percent_Identity=30.8411214953271, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1790195, Length=339, Percent_Identity=34.5132743362832, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1788710, Length=425, Percent_Identity=25.6470588235294, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1788392, Length=411, Percent_Identity=29.683698296837, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790146, Length=170, Percent_Identity=30, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324954, Length=386, Percent_Identity=24.6113989637306, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47001; Mature: 46869
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHAQSVRTGLPTLLALSAGMFMAVLDTNIVNLALPALLRSLDASLSQLTWIVDAYALGF CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLMLSAGWLADRFGPRRMLAWGLALFVLASLLCGLAPGARTLILFRLLQGMAAALFIPS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SLGLLRHAFPHPAERARAVGLYGGLSASAAAAGPVLGGLLLAPLGWRGAFLINVPIGLAA HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHH LLAIPFVVPHRQAMPTRGADLPGQAAGMLTLLLASYALIEGPRLGAPVLFALLLAVAGCG HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RLFWQLENANPQAMVPPELFRNPVFAAANWVGFAIGVAYFGTLLLLSLYLQQGLGLDALH HHHEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AGLAMLPLAGCLIIGNVAAGRLLPRLGARRQIRGGLLLSAAGYLLLALADGHALAWSLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH MLPLALGTALAIAPMTATVLESAPPHLSGTASAVLNAVRQTGALVGAAGAALAVGYGADL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHH RHALAIGLSVAALASLSGALIAGWIPRAGQQAAPEPAPAAR HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PHAQSVRTGLPTLLALSAGMFMAVLDTNIVNLALPALLRSLDASLSQLTWIVDAYALGF CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLMLSAGWLADRFGPRRMLAWGLALFVLASLLCGLAPGARTLILFRLLQGMAAALFIPS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SLGLLRHAFPHPAERARAVGLYGGLSASAAAAGPVLGGLLLAPLGWRGAFLINVPIGLAA HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHH LLAIPFVVPHRQAMPTRGADLPGQAAGMLTLLLASYALIEGPRLGAPVLFALLLAVAGCG HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RLFWQLENANPQAMVPPELFRNPVFAAANWVGFAIGVAYFGTLLLLSLYLQQGLGLDALH HHHEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AGLAMLPLAGCLIIGNVAAGRLLPRLGARRQIRGGLLLSAAGYLLLALADGHALAWSLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH MLPLALGTALAIAPMTATVLESAPPHLSGTASAVLNAVRQTGALVGAAGAALAVGYGADL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHH RHALAIGLSVAALASLSGALIAGWIPRAGQQAAPEPAPAAR HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2828187; 12000953 [H]