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The map label for this gene is ykuI [H]

Identifier: 34496112

GI number: 34496112

Start: 685839

End: 687041

Strand: Reverse

Name: ykuI [H]

Synonym: CV_0657

Alternate gene names: 34496112

Gene position: 687041-685839 (Counterclockwise)

Preceding gene: 34496113

Following gene: 34496107

Centisome position: 14.46

GC content: 67.41

Gene sequence:

>1203_bases
ATGACAGCATTCGAGCACGCCGGCCTGAAAATCGGCAGCCACTTCCAGCCCGTCTACAGCCTGGCGCACCGGCGCAGCAT
AGGCGTGGAGGCGTTGCTGCGCGCCGAACAGGGCCAGACCGCGCTCTCCCCCGCCGAAGCCTTCTACACCGCCGCTTCGC
CCGAGCAGCGCCACCAGCTCGACCTGGCCATCTGCCGCGCCCACATCCAGCGCTACCTGCAGCTGAAGTCCGACCACCCG
CGCTGGCTGTTCCTCAACATCGACGCCGCCTCGCTGTCGCGCCCGGACCGCGCGATGGCGCTGGTCAACCACATCCGCCA
GGCCGGCCTGGAGCCGCACCAGGTGGTGCTGGAAGTGCTGGAGCACGTGCTGGAGGTGGACGAGGCGCTGATCGAGGGCG
TTCATATCCTTAAGAACAACGGCTTCATGATCGCGATAGACGACTTCGGCGTCGGCCACTCCAATCTGGAGCGGGTGTGC
CAGCTGGAACCCAGCCTGGTCAAGTTCGACCGCCAGCTGCTGCGCAACGCCCTCACCCAGCCGCGCAGCCGCGGCCTGCT
GTCCAGGCTGGTGCGGCTGATGCACGAAATCGGTGCGCTGGTGGTGGTGGAAGGGATAGAAACCGAGCGCGACGTGCTGG
TGGCGATGGATTCCGGCTGCGACCTGATCCAGGGCTTTTTCATCGCCAAGCCGGCCGACGACCCGGCCGGCGACGAGACG
ATCACGCCGAAGCTGGACGAGCGCTGGGACGAGCTGATGGCGCACGCGCTGCTCAAGCGCAAGCTCACCCGCCGCCAGAT
CGAGCTGGCGCGGCAATGCTTCGTCCAAAGCGCGATCTCGCTGATGCAGGGCACGCCGTTCGACCTGGCGGCCAAGCCCA
TGCTGTCGCTGCCGGACGTGATCCGCTGCTTCCTGCTGGACAGCGAGGGCCGGCAGATCGGCCGCAACCTCAACAGCCGC
CAGTCGTCGACCAGCGCCGACCCGCGCTACAGCCCGCTGGCCGACACCACCGGCGCGGTGTGGTCGCGCCGCAGCTATTT
CCAGCACGCGGTGGACCAGCCCGGCGTGCTGTACATGAGCGAGCCCTATCTGTCGATGACCGACCCGCGCTCCTGCGTGA
CGATGTCGATGGCCATCGAGATCGACGAGTGCCTGCACGTGCTGTGCGCCGACCTGCTGGTGCCGCAGCACGACACCATC
TGA

Upstream 100 bases:

>100_bases
TTTTATTTGAACGCCCATGCACTAAACTGGAATGCCGATTGCTTCAGCAGCGGACAAGGGCCGACAGAGCCCGCATCTTG
GACACGGAGGCAGTATCGCG

Downstream 100 bases:

>100_bases
CGCTTTGCCCGCTCGGTAGGGTGCCCAAAACACAAGCGGCCCGAAAGGGCCGCTTTTGCTTGCCGCGCCTATTGCGCCGG
CGTCACATCCTGGATGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTAFEHAGLKIGSHFQPVYSLAHRRSIGVEALLRAEQGQTALSPAEAFYTAASPEQRHQLDLAICRAHIQRYLQLKSDHP
RWLFLNIDAASLSRPDRAMALVNHIRQAGLEPHQVVLEVLEHVLEVDEALIEGVHILKNNGFMIAIDDFGVGHSNLERVC
QLEPSLVKFDRQLLRNALTQPRSRGLLSRLVRLMHEIGALVVVEGIETERDVLVAMDSGCDLIQGFFIAKPADDPAGDET
ITPKLDERWDELMAHALLKRKLTRRQIELARQCFVQSAISLMQGTPFDLAAKPMLSLPDVIRCFLLDSEGRQIGRNLNSR
QSSTSADPRYSPLADTTGAVWSRRSYFQHAVDQPGVLYMSEPYLSMTDPRSCVTMSMAIEIDECLHVLCADLLVPQHDTI

Sequences:

>Translated_400_residues
MTAFEHAGLKIGSHFQPVYSLAHRRSIGVEALLRAEQGQTALSPAEAFYTAASPEQRHQLDLAICRAHIQRYLQLKSDHP
RWLFLNIDAASLSRPDRAMALVNHIRQAGLEPHQVVLEVLEHVLEVDEALIEGVHILKNNGFMIAIDDFGVGHSNLERVC
QLEPSLVKFDRQLLRNALTQPRSRGLLSRLVRLMHEIGALVVVEGIETERDVLVAMDSGCDLIQGFFIAKPADDPAGDET
ITPKLDERWDELMAHALLKRKLTRRQIELARQCFVQSAISLMQGTPFDLAAKPMLSLPDVIRCFLLDSEGRQIGRNLNSR
QSSTSADPRYSPLADTTGAVWSRRSYFQHAVDQPGVLYMSEPYLSMTDPRSCVTMSMAIEIDECLHVLCADLLVPQHDTI
>Mature_399_residues
TAFEHAGLKIGSHFQPVYSLAHRRSIGVEALLRAEQGQTALSPAEAFYTAASPEQRHQLDLAICRAHIQRYLQLKSDHPR
WLFLNIDAASLSRPDRAMALVNHIRQAGLEPHQVVLEVLEHVLEVDEALIEGVHILKNNGFMIAIDDFGVGHSNLERVCQ
LEPSLVKFDRQLLRNALTQPRSRGLLSRLVRLMHEIGALVVVEGIETERDVLVAMDSGCDLIQGFFIAKPADDPAGDETI
TPKLDERWDELMAHALLKRKLTRRQIELARQCFVQSAISLMQGTPFDLAAKPMLSLPDVIRCFLLDSEGRQIGRNLNSRQ
SSTSADPRYSPLADTTGAVWSRRSYFQHAVDQPGVLYMSEPYLSMTDPRSCVTMSMAIEIDECLHVLCADLLVPQHDTI

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=260, Percent_Identity=30.3846153846154, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787055, Length=250, Percent_Identity=26.8, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081921, Length=140, Percent_Identity=30, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081845, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788502, Length=239, Percent_Identity=25.5230125523013, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081743, Length=225, Percent_Identity=25.3333333333333, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87082096, Length=155, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787541, Length=148, Percent_Identity=27.027027027027, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788849, Length=237, Percent_Identity=25.3164556962025, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 44793; Mature: 44662

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFEHAGLKIGSHFQPVYSLAHRRSIGVEALLRAEQGQTALSPAEAFYTAASPEQRHQL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHH
DLAICRAHIQRYLQLKSDHPRWLFLNIDAASLSRPDRAMALVNHIRQAGLEPHQVVLEVL
HHHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
EHVLEVDEALIEGVHILKNNGFMIAIDDFGVGHSNLERVCQLEPSLVKFDRQLLRNALTQ
HHHHHHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PRSRGLLSRLVRLMHEIGALVVVEGIETERDVLVAMDSGCDLIQGFFIAKPADDPAGDET
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHHHHEEECCCCCCCCCCC
ITPKLDERWDELMAHALLKRKLTRRQIELARQCFVQSAISLMQGTPFDLAAKPMLSLPDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHH
IRCFLLDSEGRQIGRNLNSRQSSTSADPRYSPLADTTGAVWSRRSYFQHAVDQPGVLYMS
HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
EPYLSMTDPRSCVTMSMAIEIDECLHVLCADLLVPQHDTI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAFEHAGLKIGSHFQPVYSLAHRRSIGVEALLRAEQGQTALSPAEAFYTAASPEQRHQL
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHH
DLAICRAHIQRYLQLKSDHPRWLFLNIDAASLSRPDRAMALVNHIRQAGLEPHQVVLEVL
HHHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
EHVLEVDEALIEGVHILKNNGFMIAIDDFGVGHSNLERVCQLEPSLVKFDRQLLRNALTQ
HHHHHHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PRSRGLLSRLVRLMHEIGALVVVEGIETERDVLVAMDSGCDLIQGFFIAKPADDPAGDET
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHHHHEEECCCCCCCCCCC
ITPKLDERWDELMAHALLKRKLTRRQIELARQCFVQSAISLMQGTPFDLAAKPMLSLPDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHH
IRCFLLDSEGRQIGRNLNSRQSSTSADPRYSPLADTTGAVWSRRSYFQHAVDQPGVLYMS
HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
EPYLSMTDPRSCVTMSMAIEIDECLHVLCADLLVPQHDTI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]