| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496104
Identifier: 34496104
GI number: 34496104
Start: 678527
End: 678781
Strand: Reverse
Name: 34496104
Synonym: CV_0649
Alternate gene names: NA
Gene position: 678781-678527 (Counterclockwise)
Preceding gene: 34496105
Following gene: 34496103
Centisome position: 14.29
GC content: 47.45
Gene sequence:
>255_bases ATGTCCGATTGCGTCCATATTGGTCCGATACCGTCCAGCTATTCAAAAATCGCCCCGCTGCTTTCCGTTTCCTCGCCTGT CGTCAATAGCCAAATCCGCGTTTTTTCGGCTTTTCAAGTTTTGTTGTTGTGTGGCGATTCCACACAACAAGCCCGCCAAA CTCGATTTGAAATTTCTGAAATACTGCGTTCGCTGATCGGCGTGTCCGATTGCATCCACAGTTATTCAGACAAAACGATA AGGACAACCCCATGA
Upstream 100 bases:
>100_bases ATTCATGCGTTTTCATGCAGTCTATGCATGCAGTCGCCGTTTTGGCTGACTGACGTTTCCGCCCTTCTCTCTCCTCTCCC GCTTAAATTGGCCGCCGAGT
Downstream 100 bases:
>100_bases CCGCTAATGCCCCTTCGCTCACCGCCCAGCCGCTGCGCTTTCTGCGCTTGCCGGAAGTCATCTCTACGTGCGGCCTGTCC CGCTCGTCGGTGTACGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSDCVHIGPIPSSYSKIAPLLSVSSPVVNSQIRVFSAFQVLLLCGDSTQQARQTRFEISEILRSLIGVSDCIHSYSDKTI RTTP
Sequences:
>Translated_84_residues MSDCVHIGPIPSSYSKIAPLLSVSSPVVNSQIRVFSAFQVLLLCGDSTQQARQTRFEISEILRSLIGVSDCIHSYSDKTI RTTP >Mature_83_residues SDCVHIGPIPSSYSKIAPLLSVSSPVVNSQIRVFSAFQVLLLCGDSTQQARQTRFEISEILRSLIGVSDCIHSYSDKTIR TTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9198; Mature: 9066
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDCVHIGPIPSSYSKIAPLLSVSSPVVNSQIRVFSAFQVLLLCGDSTQQARQTRFEISE CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILRSLIGVSDCIHSYSDKTIRTTP HHHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure SDCVHIGPIPSSYSKIAPLLSVSSPVVNSQIRVFSAFQVLLLCGDSTQQARQTRFEISE CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILRSLIGVSDCIHSYSDKTIRTTP HHHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA