| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496096
Identifier: 34496096
GI number: 34496096
Start: 672118
End: 674919
Strand: Reverse
Name: 34496096
Synonym: CV_0641
Alternate gene names: NA
Gene position: 674919-672118 (Counterclockwise)
Preceding gene: 34496097
Following gene: 34496095
Centisome position: 14.21
GC content: 66.6
Gene sequence:
>2802_bases ATGAATGCTAGAAACCCTCTCCCGCGCACCGGGCGAGACGCCCCCGGCTTGTCTGGCGGTTCGTCCACCGCGCTCGGCCA ATGGTTCGACCAGTTGAAGGACAGCATCGACTTGTACGACCTGGCGGCCCGGCTGGACCTGAAGCGCCAGGGCAAGGGCA ACTATCACAGCCCGCATCACCCGGACAGCAGCGCCTCGCTGTCGATCTTCGCCGACGGCCGCGGCTGGAAGGACTGGAGC GGCGACGCCGGCGGCAGCTGCATCGACTTGCTGCGCTATTGCCGGCCGGAGCTGGACACCCCGCTGGCGGCCGCGCGGCT GCTGGGCGACTGGTACGGCATGCCGCAACCGAAACCGGCGATGAAGGAAAGGGCCGCGCCGGCGCGCAAGTCCACCCTCG ACTACATCGCCGAGCGCTGCCTGGCTCAAGCCGATGCCGCCGTGGCCTACCTGGCCGGCCGAGGCATAGACGAGGCGGTG ATCCGCCGCGCCATCCAGTGCAAGACGCTGGGCTGGAATGATTGGCACAGCGCCAAGGTGGCGGCCGGCGAAGTGGGCCA CGGCGGCCCGGCCGCCGCCTTCCTGGTGCGCAGCGGCAGCCGGCTGGCGGCGGTGGATCTGCGCTATGTCAATCCAGCCT TGAATGGCGGCGTGAAGACGCAATGCCAGGGCGAGCGCGAGGGCCACGGCTGGTGCAGCGATCCGGCGCGGCTGAAGCGG GCGCGGATGGTGGTGATCGTGGAAAGTCCGATCAATGCCTTGTCGGTGGAGTGCTGCGCGTCATCCGATGTGGCTGCGCT GGTGCTGCGCGGCGTCGGCAATGTGGACAGCATCGACTGGACCGCCTTGCGCGGCAAGCGGGTGCTGGTGGCGCTGGACC ACAGCGACCCGGTCAACCCGGCGACCGGCTTGCGGCCGGGCCTGGCCGCCGCCTGGCGGCTATCGGAAAAGCTGATTGCC GCCGACATCGGCCATTTGCTGGTGGACATGCAGGAATGGGACGAAGGCGAGGACATCAATGATGTGCTGCAGCGCCATGG CAAGGACGAGCTGACCGCGCGCTTGCGCAAGCTGGAACCGTGGCTGGTGCCGGGCATGCCGGGCGGCGGCGAGCGTTTGG AGGGGACGCGGCGGGTACAGCTGCCTGGCCATGACTTCGCGGTGTACTGGCGCTTCCGGGTGAAGGAGGACTTCACCCAA TACATAGACGAGTTCAAGACCGACGACGACGGCAAGCGCTCGGAAACCCTGGGCGATCTGTGTTCCTTCCGCGTGGCCAG CCTGTCGCGGCTGCGCATTCAGAGCCACCTGGCCACCATCAGCGGCGCGGCCGACCATCAGCCGGAAACGGTGTTCGGCA TCAGCGCCCAGCTGGCGCGCCATGGCACGGTGTTGCATCGCGAGGTGGCCACCGACGACAAGCTGTACAACCTGGAATGG TGGAAGGGGCGATTCGGCGCGATCTGGAAGCCGGCGCAGTTCCAACGGCTGGTCAATCTGATGGAGCGGGCGGCCGACCT GGGCGCGCGCGATGTGGTCAACTTCGTCGGCCTGTCGTGGAAGGCCGGCGCGCTGGCGGCGCAGGAGGGACAAGACTGCT ATTTCGTCGAGCCGCAGAAGCAATGCCTGTACTACAACCTGACCTTCCCGCGCGGCACGCAGCAACAGGCGCGGACGGTG ATTCAAGCCTATCAGGACACCTTCCGCGACAATGCGGCCGCCATCGTGTTGGTCTGGGGCTTGGGCACCCATCTGAAGAA CCTGCTGGGCTTCTATCCGCATTTCCAGATGCAGGCCGAGAAGGGATCGGGCAAGTCCAAGCTGCTGGAGAGCCTGCAAA CCACCTTGGCGTTTCAGGTGCTGTCCGGGCAGATGCTGAAAACCGACCACCGCCGCCGCGCGTCGGTCTCCTTCACCTCG CAGCCGGTGGGCTGGGATGAATTCTCCAAGCTGCCGAAGACGGTGCTGTCGGACATCGACGCGCTGCTGCAATCGACCTA TCGCTTCGAGTTCACCCGCGTCGGCGCCAGCCTGACGCCCTACCTGATGTGCGCGCCGGTGCTGCTGGCCGGCGAAGAGG TGGACGCGCAGAGCCTGCAATCCAAGCTATGCCGCAGCAGCCTGTCGAAGGAGCGGCAAGGGGTGATCATCCCGCACGAT CTGCCGGTGTTTCCGCTGTGGCCGTGGTTGCAGTTCCTCGCCGACATCGAGCCGGCCCGGCTGCGCGATCTGCATCGCCA TTACCTGGGCGTGTGCGAGCGGCACAGCCGCGCCCCGGCCGGCGACGCCACCGCGCGGCGGATGATGGAGAACTACGCCG CCCTGCTGTGCAGCTGGGCCTTGCTGTGCGAGTTCGCCGACCTCGACCCGCAGCAAGGCAGCTTCATCGAAGACCTGCTG GCAGAAATGAACAGCCACATCGTGGACACCGACGGCAGCCGCCTGCCCTGGGTCTGGATCATGGAAATCCTGCTGTCCGA GCTGGAGGCCCGACGCTATGACTACCCGCACTGCTGGGACCGGGTGAAGCATCCCGATGGCCACACCGAAATGGCGCTGT TCATCCGGCCGAACCATGTGATGGACCATCTTTCCACCGCGCCGCATCTACGGGCCAAGTTCGACGCGCTGCCGGTGAAG ACCGGCCGCATCTTCAAGAATCAGCTGCTGCAAAGCCCGGTGGTGCTGGCCGATGGCGTCGAGAAGACCATCCACGGCCG CCGCCAGGGCCATCTGACCGCCATCAGCCTGGCGCAGCTGGAGAAGCTGGGCTTGTACGCCGCGCCCGACGTCCAGCCCT AA
Upstream 100 bases:
>100_bases GCCGTTGCCGGCCAATCGCGTCGCCGGCCTACTGGCCCCGCTGCAACAGCAGGTGGTCCACGCCTGCTCCGAAATCGGCC AAATTCTCTAAGGAACCCCC
Downstream 100 bases:
>100_bases GCCTCAAACCGCCCGCCCCATCCCCTCGACAGCCCGCCTTGCGTGGGCTGTCACGCTTTGCCCCGCTCAAACTGCGAAAC AACAAACCCTTCCCTATATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MNARNPLPRTGRDAPGLSGGSSTALGQWFDQLKDSIDLYDLAARLDLKRQGKGNYHSPHHPDSSASLSIFADGRGWKDWS GDAGGSCIDLLRYCRPELDTPLAAARLLGDWYGMPQPKPAMKERAAPARKSTLDYIAERCLAQADAAVAYLAGRGIDEAV IRRAIQCKTLGWNDWHSAKVAAGEVGHGGPAAAFLVRSGSRLAAVDLRYVNPALNGGVKTQCQGEREGHGWCSDPARLKR ARMVVIVESPINALSVECCASSDVAALVLRGVGNVDSIDWTALRGKRVLVALDHSDPVNPATGLRPGLAAAWRLSEKLIA ADIGHLLVDMQEWDEGEDINDVLQRHGKDELTARLRKLEPWLVPGMPGGGERLEGTRRVQLPGHDFAVYWRFRVKEDFTQ YIDEFKTDDDGKRSETLGDLCSFRVASLSRLRIQSHLATISGAADHQPETVFGISAQLARHGTVLHREVATDDKLYNLEW WKGRFGAIWKPAQFQRLVNLMERAADLGARDVVNFVGLSWKAGALAAQEGQDCYFVEPQKQCLYYNLTFPRGTQQQARTV IQAYQDTFRDNAAAIVLVWGLGTHLKNLLGFYPHFQMQAEKGSGKSKLLESLQTTLAFQVLSGQMLKTDHRRRASVSFTS QPVGWDEFSKLPKTVLSDIDALLQSTYRFEFTRVGASLTPYLMCAPVLLAGEEVDAQSLQSKLCRSSLSKERQGVIIPHD LPVFPLWPWLQFLADIEPARLRDLHRHYLGVCERHSRAPAGDATARRMMENYAALLCSWALLCEFADLDPQQGSFIEDLL AEMNSHIVDTDGSRLPWVWIMEILLSELEARRYDYPHCWDRVKHPDGHTEMALFIRPNHVMDHLSTAPHLRAKFDALPVK TGRIFKNQLLQSPVVLADGVEKTIHGRRQGHLTAISLAQLEKLGLYAAPDVQP
Sequences:
>Translated_933_residues MNARNPLPRTGRDAPGLSGGSSTALGQWFDQLKDSIDLYDLAARLDLKRQGKGNYHSPHHPDSSASLSIFADGRGWKDWS GDAGGSCIDLLRYCRPELDTPLAAARLLGDWYGMPQPKPAMKERAAPARKSTLDYIAERCLAQADAAVAYLAGRGIDEAV IRRAIQCKTLGWNDWHSAKVAAGEVGHGGPAAAFLVRSGSRLAAVDLRYVNPALNGGVKTQCQGEREGHGWCSDPARLKR ARMVVIVESPINALSVECCASSDVAALVLRGVGNVDSIDWTALRGKRVLVALDHSDPVNPATGLRPGLAAAWRLSEKLIA ADIGHLLVDMQEWDEGEDINDVLQRHGKDELTARLRKLEPWLVPGMPGGGERLEGTRRVQLPGHDFAVYWRFRVKEDFTQ YIDEFKTDDDGKRSETLGDLCSFRVASLSRLRIQSHLATISGAADHQPETVFGISAQLARHGTVLHREVATDDKLYNLEW WKGRFGAIWKPAQFQRLVNLMERAADLGARDVVNFVGLSWKAGALAAQEGQDCYFVEPQKQCLYYNLTFPRGTQQQARTV IQAYQDTFRDNAAAIVLVWGLGTHLKNLLGFYPHFQMQAEKGSGKSKLLESLQTTLAFQVLSGQMLKTDHRRRASVSFTS QPVGWDEFSKLPKTVLSDIDALLQSTYRFEFTRVGASLTPYLMCAPVLLAGEEVDAQSLQSKLCRSSLSKERQGVIIPHD LPVFPLWPWLQFLADIEPARLRDLHRHYLGVCERHSRAPAGDATARRMMENYAALLCSWALLCEFADLDPQQGSFIEDLL AEMNSHIVDTDGSRLPWVWIMEILLSELEARRYDYPHCWDRVKHPDGHTEMALFIRPNHVMDHLSTAPHLRAKFDALPVK TGRIFKNQLLQSPVVLADGVEKTIHGRRQGHLTAISLAQLEKLGLYAAPDVQP >Mature_933_residues MNARNPLPRTGRDAPGLSGGSSTALGQWFDQLKDSIDLYDLAARLDLKRQGKGNYHSPHHPDSSASLSIFADGRGWKDWS GDAGGSCIDLLRYCRPELDTPLAAARLLGDWYGMPQPKPAMKERAAPARKSTLDYIAERCLAQADAAVAYLAGRGIDEAV IRRAIQCKTLGWNDWHSAKVAAGEVGHGGPAAAFLVRSGSRLAAVDLRYVNPALNGGVKTQCQGEREGHGWCSDPARLKR ARMVVIVESPINALSVECCASSDVAALVLRGVGNVDSIDWTALRGKRVLVALDHSDPVNPATGLRPGLAAAWRLSEKLIA ADIGHLLVDMQEWDEGEDINDVLQRHGKDELTARLRKLEPWLVPGMPGGGERLEGTRRVQLPGHDFAVYWRFRVKEDFTQ YIDEFKTDDDGKRSETLGDLCSFRVASLSRLRIQSHLATISGAADHQPETVFGISAQLARHGTVLHREVATDDKLYNLEW WKGRFGAIWKPAQFQRLVNLMERAADLGARDVVNFVGLSWKAGALAAQEGQDCYFVEPQKQCLYYNLTFPRGTQQQARTV IQAYQDTFRDNAAAIVLVWGLGTHLKNLLGFYPHFQMQAEKGSGKSKLLESLQTTLAFQVLSGQMLKTDHRRRASVSFTS QPVGWDEFSKLPKTVLSDIDALLQSTYRFEFTRVGASLTPYLMCAPVLLAGEEVDAQSLQSKLCRSSLSKERQGVIIPHD LPVFPLWPWLQFLADIEPARLRDLHRHYLGVCERHSRAPAGDATARRMMENYAALLCSWALLCEFADLDPQQGSFIEDLL AEMNSHIVDTDGSRLPWVWIMEILLSELEARRYDYPHCWDRVKHPDGHTEMALFIRPNHVMDHLSTAPHLRAKFDALPVK TGRIFKNQLLQSPVVLADGVEKTIHGRRQGHLTAISLAQLEKLGLYAAPDVQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103715; Mature: 103715
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARNPLPRTGRDAPGLSGGSSTALGQWFDQLKDSIDLYDLAARLDLKRQGKGNYHSPHH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC PDSSASLSIFADGRGWKDWSGDAGGSCIDLLRYCRPELDTPLAAARLLGDWYGMPQPKPA CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHH MKERAAPARKSTLDYIAERCLAQADAAVAYLAGRGIDEAVIRRAIQCKTLGWNDWHSAKV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEE AAGEVGHGGPAAAFLVRSGSRLAAVDLRYVNPALNGGVKTQCQGEREGHGWCSDPARLKR ECCCCCCCCHHHHHEEECCCEEEEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCHHHHHH ARMVVIVESPINALSVECCASSDVAALVLRGVGNVDSIDWTALRGKRVLVALDHSDPVNP CEEEEEEECCCCCEEHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCC ATGLRPGLAAAWRLSEKLIAADIGHLLVDMQEWDEGEDINDVLQRHGKDELTARLRKLEP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCC WLVPGMPGGGERLEGTRRVQLPGHDFAVYWRFRVKEDFTQYIDEFKTDDDGKRSETLGDL EECCCCCCCCCCCCCCEEEECCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHH CSFRVASLSRLRIQSHLATISGAADHQPETVFGISAQLARHGTVLHREVATDDKLYNLEW HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCHHHHHHCCCCCEEECEE WKGRFGAIWKPAQFQRLVNLMERAADLGARDVVNFVGLSWKAGALAAQEGQDCYFVEPQK CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC QCLYYNLTFPRGTQQQARTVIQAYQDTFRDNAAAIVLVWGLGTHLKNLLGFYPHFQMQAE CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEEC KGSGKSKLLESLQTTLAFQVLSGQMLKTDHRRRASVSFTSQPVGWDEFSKLPKTVLSDID CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH ALLQSTYRFEFTRVGASLTPYLMCAPVLLAGEEVDAQSLQSKLCRSSLSKERQGVIIPHD HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEECCCC LPVFPLWPWLQFLADIEPARLRDLHRHYLGVCERHSRAPAGDATARRMMENYAALLCSWA CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LLCEFADLDPQQGSFIEDLLAEMNSHIVDTDGSRLPWVWIMEILLSELEARRYDYPHCWD HHHHHHCCCCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH RVKHPDGHTEMALFIRPNHVMDHLSTAPHLRAKFDALPVKTGRIFKNQLLQSPVVLADGV HCCCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCH EKTIHGRRQGHLTAISLAQLEKLGLYAAPDVQP HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNARNPLPRTGRDAPGLSGGSSTALGQWFDQLKDSIDLYDLAARLDLKRQGKGNYHSPHH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC PDSSASLSIFADGRGWKDWSGDAGGSCIDLLRYCRPELDTPLAAARLLGDWYGMPQPKPA CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHH MKERAAPARKSTLDYIAERCLAQADAAVAYLAGRGIDEAVIRRAIQCKTLGWNDWHSAKV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEE AAGEVGHGGPAAAFLVRSGSRLAAVDLRYVNPALNGGVKTQCQGEREGHGWCSDPARLKR ECCCCCCCCHHHHHEEECCCEEEEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCHHHHHH ARMVVIVESPINALSVECCASSDVAALVLRGVGNVDSIDWTALRGKRVLVALDHSDPVNP CEEEEEEECCCCCEEHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCC ATGLRPGLAAAWRLSEKLIAADIGHLLVDMQEWDEGEDINDVLQRHGKDELTARLRKLEP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCC WLVPGMPGGGERLEGTRRVQLPGHDFAVYWRFRVKEDFTQYIDEFKTDDDGKRSETLGDL EECCCCCCCCCCCCCCEEEECCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHH CSFRVASLSRLRIQSHLATISGAADHQPETVFGISAQLARHGTVLHREVATDDKLYNLEW HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCHHHHHHCCCCCEEECEE WKGRFGAIWKPAQFQRLVNLMERAADLGARDVVNFVGLSWKAGALAAQEGQDCYFVEPQK CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC QCLYYNLTFPRGTQQQARTVIQAYQDTFRDNAAAIVLVWGLGTHLKNLLGFYPHFQMQAE CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEEC KGSGKSKLLESLQTTLAFQVLSGQMLKTDHRRRASVSFTSQPVGWDEFSKLPKTVLSDID CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH ALLQSTYRFEFTRVGASLTPYLMCAPVLLAGEEVDAQSLQSKLCRSSLSKERQGVIIPHD HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEECCCC LPVFPLWPWLQFLADIEPARLRDLHRHYLGVCERHSRAPAGDATARRMMENYAALLCSWA CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LLCEFADLDPQQGSFIEDLLAEMNSHIVDTDGSRLPWVWIMEILLSELEARRYDYPHCWD HHHHHHCCCCCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH RVKHPDGHTEMALFIRPNHVMDHLSTAPHLRAKFDALPVKTGRIFKNQLLQSPVVLADGV HCCCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCH EKTIHGRRQGHLTAISLAQLEKLGLYAAPDVQP HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA