| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496094
Identifier: 34496094
GI number: 34496094
Start: 669869
End: 671113
Strand: Reverse
Name: 34496094
Synonym: CV_0639
Alternate gene names: NA
Gene position: 671113-669869 (Counterclockwise)
Preceding gene: 34496095
Following gene: 34496093
Centisome position: 14.13
GC content: 38.8
Gene sequence:
>1245_bases ATGAAAATCTCAATTGAGAACATTGGGAAGATAAAAAGCACCAGCATATTGCTAGATGGGTTTACGGTTATTGCGGGTGA AAATGACTCGGGAAAGAGCACTGTTGGGAAAATTGTTTATTCAATTATACAGGCCTTTTCAATATACCCACAGTTTAGAA AAGAAAAAATTAGACGTAAAACTTCACATTCTCTTAGATTTTTCATTACAGAGCTCAGAAGAAATTTTGATTTAACAAAG CATGACAGCCTTAGACAAATGATGTCTTTTTCATTCGTTAATCATATCATGGCAGATCCAGATGATGCGCTTTATGAGAT AAGGGGCGTATTAGACAAGCTTGAAGAATCATACCCGGAAAAACTGGAAACCCTTATTAAGCTCAAATCGCGGCTATATG GGATTCAAAGAGAAATTGACTCCCTATCAGAGTCGGATGATATTTTTGAATCCATTACAGACCTAATGCAGTCTGAGTTT GGCGGTGAGATAGATAGGAAACAAGACTCTCGCCCACCATCATTTGAAATAAATGATGGCGAAACAACTGTAATTTCGGC AAAATTTAGCGATGGCATCATCACCGATGGCATATATTCAGGAGGTCTAGGGTTAGGGCTAGGTGATGCCACTTACATCG ATGGCGCATCAATACTTCAATACGCACATTTAATTAACTTAAACGATTCCGACCCACGTCTTCCATTTCACATCACAGAT CTTGCGAGGAAATTAATTAGCCCAACTCTCGTAAGAGGTGGAAGTAGTAACTTGGCTGACATTTACAAAGGACGCTTGGT TTTTGATGAAACGCAAAACAGCTTCTACTTTGACAAAGGAGGCTATAGGGTTTGCCTGAACAATATAGCAAGCGGCATTA AGAATATCGGTGTGCTTGACTTGCTAGTAAAAAAGGGGGTCATTTGCGATGGTTCATTACTAGTCTTGGATGAACCCGAA ATTAATCTTCATCCCAAATGGCAAACACAGTTAGCGAAAATAATTTGCGAACTACATCAAGCTGGAGTATACATACTTCT AACTACTCACAGCCCCTATATGATTGAAGCTTTGCATTACTATGCAAATGTGAGCGGTATAAAATCCAACTTTTATTTAG CTTGTAAAAGCATAGCAAATCCTGACGATGTTGATTTTATTGACTTAAGCATGAATGTTGGGGCAATCATTGAGGACTTG GCACAACCACTTTGGGACATCGTGGAAGATAATAATGAGTTCTGA
Upstream 100 bases:
>100_bases TTTTAAATAGATACTATCAAACCCAATAAAACAACTAATTTTATTCTGGAACACAACAAGAACTACTTCTATAGAATCAA CAAAATTAGGAATTTTAAAT
Downstream 100 bases:
>100_bases TGCAAAAAAATTGTTTGATAAGTTATGCGAGGCATACCCAGATGCCCTGCAAGATATTACCCAATTAAGCAAAAATACCG ATGCAAATAGATTTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKISIENIGKIKSTSILLDGFTVIAGENDSGKSTVGKIVYSIIQAFSIYPQFRKEKIRRKTSHSLRFFITELRRNFDLTK HDSLRQMMSFSFVNHIMADPDDALYEIRGVLDKLEESYPEKLETLIKLKSRLYGIQREIDSLSESDDIFESITDLMQSEF GGEIDRKQDSRPPSFEINDGETTVISAKFSDGIITDGIYSGGLGLGLGDATYIDGASILQYAHLINLNDSDPRLPFHITD LARKLISPTLVRGGSSNLADIYKGRLVFDETQNSFYFDKGGYRVCLNNIASGIKNIGVLDLLVKKGVICDGSLLVLDEPE INLHPKWQTQLAKIICELHQAGVYILLTTHSPYMIEALHYYANVSGIKSNFYLACKSIANPDDVDFIDLSMNVGAIIEDL AQPLWDIVEDNNEF
Sequences:
>Translated_414_residues MKISIENIGKIKSTSILLDGFTVIAGENDSGKSTVGKIVYSIIQAFSIYPQFRKEKIRRKTSHSLRFFITELRRNFDLTK HDSLRQMMSFSFVNHIMADPDDALYEIRGVLDKLEESYPEKLETLIKLKSRLYGIQREIDSLSESDDIFESITDLMQSEF GGEIDRKQDSRPPSFEINDGETTVISAKFSDGIITDGIYSGGLGLGLGDATYIDGASILQYAHLINLNDSDPRLPFHITD LARKLISPTLVRGGSSNLADIYKGRLVFDETQNSFYFDKGGYRVCLNNIASGIKNIGVLDLLVKKGVICDGSLLVLDEPE INLHPKWQTQLAKIICELHQAGVYILLTTHSPYMIEALHYYANVSGIKSNFYLACKSIANPDDVDFIDLSMNVGAIIEDL AQPLWDIVEDNNEF >Mature_414_residues MKISIENIGKIKSTSILLDGFTVIAGENDSGKSTVGKIVYSIIQAFSIYPQFRKEKIRRKTSHSLRFFITELRRNFDLTK HDSLRQMMSFSFVNHIMADPDDALYEIRGVLDKLEESYPEKLETLIKLKSRLYGIQREIDSLSESDDIFESITDLMQSEF GGEIDRKQDSRPPSFEINDGETTVISAKFSDGIITDGIYSGGLGLGLGDATYIDGASILQYAHLINLNDSDPRLPFHITD LARKLISPTLVRGGSSNLADIYKGRLVFDETQNSFYFDKGGYRVCLNNIASGIKNIGVLDLLVKKGVICDGSLLVLDEPE INLHPKWQTQLAKIICELHQAGVYILLTTHSPYMIEALHYYANVSGIKSNFYLACKSIANPDDVDFIDLSMNVGAIIEDL AQPLWDIVEDNNEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46390; Mature: 46390
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISIENIGKIKSTSILLDGFTVIAGENDSGKSTVGKIVYSIIQAFSIYPQFRKEKIRRK CEEEHHHCCCCCCCEEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH TSHSLRFFITELRRNFDLTKHDSLRQMMSFSFVNHIMADPDDALYEIRGVLDKLEESYPE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KLETLIKLKSRLYGIQREIDSLSESDDIFESITDLMQSEFGGEIDRKQDSRPPSFEINDG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC ETTVISAKFSDGIITDGIYSGGLGLGLGDATYIDGASILQYAHLINLNDSDPRLPFHITD CEEEEEEECCCCCEECCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCEEHHH LARKLISPTLVRGGSSNLADIYKGRLVFDETQNSFYFDKGGYRVCLNNIASGIKNIGVLD HHHHHHCHHHCCCCCCCHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHCHHHH LLVKKGVICDGSLLVLDEPEINLHPKWQTQLAKIICELHQAGVYILLTTHSPYMIEALHY HHHHCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHH YANVSGIKSNFYLACKSIANPDDVDFIDLSMNVGAIIEDLAQPLWDIVEDNNEF HHHHCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKISIENIGKIKSTSILLDGFTVIAGENDSGKSTVGKIVYSIIQAFSIYPQFRKEKIRRK CEEEHHHCCCCCCCEEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH TSHSLRFFITELRRNFDLTKHDSLRQMMSFSFVNHIMADPDDALYEIRGVLDKLEESYPE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KLETLIKLKSRLYGIQREIDSLSESDDIFESITDLMQSEFGGEIDRKQDSRPPSFEINDG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC ETTVISAKFSDGIITDGIYSGGLGLGLGDATYIDGASILQYAHLINLNDSDPRLPFHITD CEEEEEEECCCCCEECCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCEEHHH LARKLISPTLVRGGSSNLADIYKGRLVFDETQNSFYFDKGGYRVCLNNIASGIKNIGVLD HHHHHHCHHHCCCCCCCHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHCHHHH LLVKKGVICDGSLLVLDEPEINLHPKWQTQLAKIICELHQAGVYILLTTHSPYMIEALHY HHHHCCCEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHH YANVSGIKSNFYLACKSIANPDDVDFIDLSMNVGAIIEDLAQPLWDIVEDNNEF HHHHCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA