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The map label for this gene is gbpA [H]

Identifier: 34496008

GI number: 34496008

Start: 590390

End: 591361

Strand: Reverse

Name: gbpA [H]

Synonym: CV_0553

Alternate gene names: 34496008

Gene position: 591361-590390 (Counterclockwise)

Preceding gene: 34496009

Following gene: 34496003

Centisome position: 12.45

GC content: 65.12

Gene sequence:

>972_bases
ATGAAACCGCAATGGCGTCTTCCCCTAGCGATGACCCTGGGTTGCCTGAGCGCGCCCTCATGGCCCCATGGCAGCATGGA
GGTTCCGGTCAGCCGCGCCTACGGCTGCTTTCAGGAAGGCCCGGAAGCGCCCATATCCTCGGCCTGCCGGGAAGCCAAGC
GCGTCGGCGGCGCCCAGGCGATGTACGACTGGAACGCGATCAACCAGACTCCCGCCGGCGACAATCACCAGGCCCTGGTG
CCGGACGGCGCGCTATGCGGCGGCGGGAAGGCCGAATTCAAGGGCTTCAATCTGGCGCGCAGCGACTGGCGCGCCACCAG
CATCGTGCCGGACGCCAAGGGCGATTACGAATTCGTCTTCCAGGCCACGGCGCCGCACGCGACCAAGTACTTCAGGCTCT
ATGTAACCCGAGACGGCTGGAATCCATCCACGCCGCTGAAATGGTCGGATCTGACGCTGTTCGGCGCCTATAACGGCAAT
CCGCCGCTGGACGTCGGCAATCGCTACCGCATGACGATGCGGCTGCCCGCCGGCAAGACCGGCCGGCACATCATCTACAG
CGTCTGGAAGCGCTCGGACAGCGAGGAAGCGTTCTACGCCTGCTCCGATGTCAGCTTCGGCCATACCACGGCATTGCCGA
TCGATAATCCGTGGAAGGAAATCGGCAGCGTCATCGCGCACCAAAACCTGCCCGCAGGCAGCAGCGCCACGCTGCGCGTG
TTCGACAGCCTGGGCCGCGACGCCGAGACGCACACCGTGGCGCTGAACGCCGCTTCCGCCCAGGCCGCCAACTGGCCTTA
CGAGCTGGCGCGGAAGGTCAACGCCGCCTCCAAGGCCATCCGCATCGGCGTGATCAGCCAGCAGCGGCGAAACGTCTCCG
TCTTTCCGGTACACGACGCCGCCAATCGCGTCTACCTGAACGACGGCTACAGAGGCTACCGCTACCAGATCGACCTGAAT
GAGCGAAGCTGA

Upstream 100 bases:

>100_bases
GGAAAAGCGAAGAAAAACGACTTCGCAAGACTGGCGCACCTTCCAACCATCCGGCGGATGCCGATCCGTCCGCATCCCGC
CACCAGAAAAGGAGTCCGTC

Downstream 100 bases:

>100_bases
ACGCAGCGGCGATGCCTGGCGGCAGGCGCGAGTTCTGACGCTCCGGGGCCGCGCCCGGCTTCGCATCCGCCGGCACGGCT
AGCGCCGCCAGCTGATCAGC

Product: carbohydrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKPQWRLPLAMTLGCLSAPSWPHGSMEVPVSRAYGCFQEGPEAPISSACREAKRVGGAQAMYDWNAINQTPAGDNHQALV
PDGALCGGGKAEFKGFNLARSDWRATSIVPDAKGDYEFVFQATAPHATKYFRLYVTRDGWNPSTPLKWSDLTLFGAYNGN
PPLDVGNRYRMTMRLPAGKTGRHIIYSVWKRSDSEEAFYACSDVSFGHTTALPIDNPWKEIGSVIAHQNLPAGSSATLRV
FDSLGRDAETHTVALNAASAQAANWPYELARKVNAASKAIRIGVISQQRRNVSVFPVHDAANRVYLNDGYRGYRYQIDLN
ERS

Sequences:

>Translated_323_residues
MKPQWRLPLAMTLGCLSAPSWPHGSMEVPVSRAYGCFQEGPEAPISSACREAKRVGGAQAMYDWNAINQTPAGDNHQALV
PDGALCGGGKAEFKGFNLARSDWRATSIVPDAKGDYEFVFQATAPHATKYFRLYVTRDGWNPSTPLKWSDLTLFGAYNGN
PPLDVGNRYRMTMRLPAGKTGRHIIYSVWKRSDSEEAFYACSDVSFGHTTALPIDNPWKEIGSVIAHQNLPAGSSATLRV
FDSLGRDAETHTVALNAASAQAANWPYELARKVNAASKAIRIGVISQQRRNVSVFPVHDAANRVYLNDGYRGYRYQIDLN
ERS
>Mature_323_residues
MKPQWRLPLAMTLGCLSAPSWPHGSMEVPVSRAYGCFQEGPEAPISSACREAKRVGGAQAMYDWNAINQTPAGDNHQALV
PDGALCGGGKAEFKGFNLARSDWRATSIVPDAKGDYEFVFQATAPHATKYFRLYVTRDGWNPSTPLKWSDLTLFGAYNGN
PPLDVGNRYRMTMRLPAGKTGRHIIYSVWKRSDSEEAFYACSDVSFGHTTALPIDNPWKEIGSVIAHQNLPAGSSATLRV
FDSLGRDAETHTVALNAASAQAANWPYELARKVNAASKAIRIGVISQQRRNVSVFPVHDAANRVYLNDGYRGYRYQIDLN
ERS

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF02839 CBM_5_12; PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 35573; Mature: 35573

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQWRLPLAMTLGCLSAPSWPHGSMEVPVSRAYGCFQEGPEAPISSACREAKRVGGAQA
CCCCCCCCHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE
MYDWNAINQTPAGDNHQALVPDGALCGGGKAEFKGFNLARSDWRATSIVPDAKGDYEFVF
EEECCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEE
QATAPHATKYFRLYVTRDGWNPSTPLKWSDLTLFGAYNGNPPLDVGNRYRMTMRLPAGKT
EECCCCCEEEEEEEEEECCCCCCCCCEECCEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GRHIIYSVWKRSDSEEAFYACSDVSFGHTTALPIDNPWKEIGSVIAHQNLPAGSSATLRV
CCHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHE
FDSLGRDAETHTVALNAASAQAANWPYELARKVNAASKAIRIGVISQQRRNVSVFPVHDA
EHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCC
ANRVYLNDGYRGYRYQIDLNERS
CCEEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure
MKPQWRLPLAMTLGCLSAPSWPHGSMEVPVSRAYGCFQEGPEAPISSACREAKRVGGAQA
CCCCCCCCHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE
MYDWNAINQTPAGDNHQALVPDGALCGGGKAEFKGFNLARSDWRATSIVPDAKGDYEFVF
EEECCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEE
QATAPHATKYFRLYVTRDGWNPSTPLKWSDLTLFGAYNGNPPLDVGNRYRMTMRLPAGKT
EECCCCCEEEEEEEEEECCCCCCCCCEECCEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GRHIIYSVWKRSDSEEAFYACSDVSFGHTTALPIDNPWKEIGSVIAHQNLPAGSSATLRV
CCHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHE
FDSLGRDAETHTVALNAASAQAANWPYELARKVNAASKAIRIGVISQQRRNVSVFPVHDA
EHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCC
ANRVYLNDGYRGYRYQIDLNERS
CCEEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA