| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is nadD
Identifier: 34495974
GI number: 34495974
Start: 551028
End: 551666
Strand: Reverse
Name: nadD
Synonym: CV_0519
Alternate gene names: 34495974
Gene position: 551666-551028 (Counterclockwise)
Preceding gene: 34495975
Following gene: 34495973
Centisome position: 11.61
GC content: 71.05
Gene sequence:
>639_bases ATGAACGCCCGCGTCGGCGTGTTCGGCGGCACCTTCGACCCCGTCCACCACGCCCACCTGCGCATGGCGCGCGCCTTCGC CGACGAGCTGGCGCTCGACGAAGTGCGGCTGATTCCCGCCGGCCAGCCCTACCACCGGCTGGAAGGGCCGCACGCCAGCG CGGCCCAGCGCCTGGACATGGTGAAGCTCGCCATCGCCGCCGACGCCAGGCTAGCGGTGGACGAGCGGGAAATCCGCCGC GCCCGGCCGGCTTACACCGTGGACACCCTGCGCGAGCTTCGCGCCGAGCTGGGCGACGCCGCCGAACTGTGGTTCCTGAT CGGCGGCGACTCGCTGGCGGCGCTGTCCTCGTGGAAGGACTGGCGCAAACTGTTCCGTCTCGCCAACCTCGCCGTCGCGA TGCGGCCCGGCTTCGATCCGGCCGCCCTTCCCCCCGAAGTCTTCCAAGAGTGGCAGGCCCGCCAAGTCTCTGATTTTTCA AATCGAACGGCTTCCGGTACAATCCGCCCCCTGGCCCTGCCGCCGCTCGACCTGTCCGCCACCCGCCTGAGGGCGCGGCT GGCCGCCGACGAGCCGGTGGACGGCCTGATAGACCCCGCCGTGCTGGCCTACATCCGCCGGCAGCGGCTATACCGGTAA
Upstream 100 bases:
>100_bases TGCCCAAGGACGTCCCGGTGCACGGCATGGTGATCCACCCGTCCACCGGCCGGCTGGAAGTGGTGATCAACGGCTACGGC GACGAGGAAGCGCCGGCCGC
Downstream 100 bases:
>100_bases GGCACCGCCCTACCCGCTCTTTTGGTACCTCTTGCCGGCGCCTGTGCCTGCTATGTACCGGCACAGGAAAAGGAATCATG GAAATTCAAGAAATCAGCAA
Product: nicotinate-nucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDMVKLAIAADARLAVDEREIRR ARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKDWRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFS NRTASGTIRPLALPPLDLSATRLRARLAADEPVDGLIDPAVLAYIRRQRLYR
Sequences:
>Translated_212_residues MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDMVKLAIAADARLAVDEREIRR ARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKDWRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFS NRTASGTIRPLALPPLDLSATRLRARLAADEPVDGLIDPAVLAYIRRQRLYR >Mature_212_residues MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDMVKLAIAADARLAVDEREIRR ARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKDWRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFS NRTASGTIRPLALPPLDLSATRLRARLAADEPVDGLIDPAVLAYIRRQRLYR
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family
Homologues:
Organism=Escherichia coli, GI1786858, Length=215, Percent_Identity=36.7441860465116, Blast_Score=140, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADD_CHRVO (Q7P0P7)
Other databases:
- EMBL: AE016825 - RefSeq: NP_900189.1 - HSSP: P54455 - ProteinModelPortal: Q7P0P7 - SMR: Q7P0P7 - GeneID: 2547854 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_0519 - NMPDR: fig|243365.1.peg.519 - HOGENOM: HBG739448 - OMA: LLGWDAF - PhylomeDB: Q7P0P7 - ProtClustDB: CLSK2485286 - BioCyc: CVIO243365:CV_0519-MONOMER - HAMAP: MF_00244 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR12039 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00482
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.18
Molecular weight: Translated: 23621; Mature: 23621
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDM CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCHHHHHHHHH VKLAIAADARLAVDEREIRRARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKD HHHHHHCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH WRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFSNRTASGTIRPLALPPLDLSA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHH TRLRARLAADEPVDGLIDPAVLAYIRRQRLYR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNARVGVFGGTFDPVHHAHLRMARAFADELALDEVRLIPAGQPYHRLEGPHASAAQRLDM CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCHHHHHHHHH VKLAIAADARLAVDEREIRRARPAYTVDTLRELRAELGDAAELWFLIGGDSLAALSSWKD HHHHHHCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH WRKLFRLANLAVAMRPGFDPAALPPEVFQEWQARQVSDFSNRTASGTIRPLALPPLDLSA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHH TRLRARLAADEPVDGLIDPAVLAYIRRQRLYR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782