| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yhiQ [C]
Identifier: 34495918
GI number: 34495918
Start: 477132
End: 477908
Strand: Reverse
Name: yhiQ [C]
Synonym: CV_0463
Alternate gene names: 34495918
Gene position: 477908-477132 (Counterclockwise)
Preceding gene: 34495922
Following gene: 34495914
Centisome position: 10.06
GC content: 70.79
Gene sequence:
>777_bases ATGACCGCCACCCCGCTTTACTGCGCCGAACCCGCCCGCCTCGACACCGCCCGCCGCCTGTGCGAGCGTTTCTCCCTGCC CCTGATCAAGCAGCGGCCGGCCGACGGCTACTGGCTGGAACTGGGATCGGAACGGCTGGAATTGCTGACCACCGGCAAGC ACGGCGCGGTATACGCCGAATTCGTCGAGGGCGCGGCGCGCCACCGCCGCGAACAGGGCGGCGGCCGCGGCCAGCCGGTG GCCAAGGCGGTGGGACTGAAAGGCGCGAAGGATCTGCCTCATGTGGCGGACGCCACCGCCGGCCTGGGCCGCGACAGCTT CGTGCTGGCCACGCTGGGCTGCCGGGTGACGATGGTGGAACGCTCGCCGGTGGCGGCGGCGCTGCTGGCCGACGCGCTGG AGCGCGCCCAGCGCGACGAAACCACCCGCGACATCGCCGCGCGGATGACGCTGGTGCACGCCAACTCGCGCAACTGGCTG GCCGGTCTGACCGAAGCTCAACGTCCGGACGTGGTGTTCGTCGACCCGATGTTCCCCGACACCGACAAGAAGTCCGCCGC CGCCAAGAAGGACATGCAGGCCTTCCAGCAGGTGATAGGCGACGACATGGACAGCGCCGAGCTGCTGGCCGCCGCCATCG CCGCCGCCAGGGTGCGGGTGGTGGTGAAACGGCCGCGCCTGGGCGCGGCCATCGCCGGCGTGAAGCCGTCTGCGGTGCTG GACGGCAAATCCACCCGCTTCGACCTCTACGTGATCAAGGCGCTGGCCTCAGGCTGA
Upstream 100 bases:
>100_bases CCTCCGCAGAGCGCCGCCGGTTCCCCTCATCCGGCCAGCCGCGGCTTGCGACGACGCCCCGCATCCCGTATCGTGCGCAA CAGATTTTGAAGGACCGCCG
Downstream 100 bases:
>100_bases GTGCGCCTCCAGGCTGTCCGGCGGCGCCTGGTGCCGGTCATGCATGCCATAATCGCGCAGCACCGCCGCCACCCGCAGCC GGTAATCGGCGAACAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTATPLYCAEPARLDTARRLCERFSLPLIKQRPADGYWLELGSERLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQPV AKAVGLKGAKDLPHVADATAGLGRDSFVLATLGCRVTMVERSPVAAALLADALERAQRDETTRDIAARMTLVHANSRNWL AGLTEAQRPDVVFVDPMFPDTDKKSAAAKKDMQAFQQVIGDDMDSAELLAAAIAAARVRVVVKRPRLGAAIAGVKPSAVL DGKSTRFDLYVIKALASG
Sequences:
>Translated_258_residues MTATPLYCAEPARLDTARRLCERFSLPLIKQRPADGYWLELGSERLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQPV AKAVGLKGAKDLPHVADATAGLGRDSFVLATLGCRVTMVERSPVAAALLADALERAQRDETTRDIAARMTLVHANSRNWL AGLTEAQRPDVVFVDPMFPDTDKKSAAAKKDMQAFQQVIGDDMDSAELLAAAIAAARVRVVVKRPRLGAAIAGVKPSAVL DGKSTRFDLYVIKALASG >Mature_257_residues TATPLYCAEPARLDTARRLCERFSLPLIKQRPADGYWLELGSERLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQPVA KAVGLKGAKDLPHVADATAGLGRDSFVLATLGCRVTMVERSPVAAALLADALERAQRDETTRDIAARMTLVHANSRNWLA GLTEAQRPDVVFVDPMFPDTDKKSAAAKKDMQAFQQVIGDDMDSAELLAAAIAAARVRVVVKRPRLGAAIAGVKPSAVLD GKSTRFDLYVIKALASG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=216, Percent_Identity=50.9259259259259, Blast_Score=175, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y463_CHRVO (Q7P0V2)
Other databases:
- EMBL: AE016825 - RefSeq: NP_900133.1 - ProteinModelPortal: Q7P0V2 - SMR: Q7P0V2 - GeneID: 2550647 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_0463 - NMPDR: fig|243365.1.peg.463 - HOGENOM: HBG563235 - OMA: STRFDLY - PhylomeDB: Q7P0V2 - ProtClustDB: CLSK2485274 - BioCyc: CVIO243365:CV_0463-MONOMER - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 27673; Mature: 27542
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPLYCAEPARLDTARRLCERFSLPLIKQRPADGYWLELGSERLELLTTGKHGAVYAE CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCHHEEEEECCCCCCHHHH FVEGAARHRREQGGGRGQPVAKAVGLKGAKDLPHVADATAGLGRDSFVLATLGCRVTMVE HHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEE RSPVAAALLADALERAQRDETTRDIAARMTLVHANSRNWLAGLTEAQRPDVVFVDPMFPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHCCCCCCCCCEEEECCCCCC TDKKSAAAKKDMQAFQQVIGDDMDSAELLAAAIAAARVRVVVKRPRLGAAIAGVKPSAVL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCEEE DGKSTRFDLYVIKALASG CCCCCEEHHHHHHHHHCC >Mature Secondary Structure TATPLYCAEPARLDTARRLCERFSLPLIKQRPADGYWLELGSERLELLTTGKHGAVYAE CCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCHHEEEEECCCCCCHHHH FVEGAARHRREQGGGRGQPVAKAVGLKGAKDLPHVADATAGLGRDSFVLATLGCRVTMVE HHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEE RSPVAAALLADALERAQRDETTRDIAARMTLVHANSRNWLAGLTEAQRPDVVFVDPMFPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHCCCCCCCCCEEEECCCCCC TDKKSAAAKKDMQAFQQVIGDDMDSAELLAAAIAAARVRVVVKRPRLGAAIAGVKPSAVL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCEEE DGKSTRFDLYVIKALASG CCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782