| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yaeQ [H]
Identifier: 34495836
GI number: 34495836
Start: 395332
End: 395868
Strand: Reverse
Name: yaeQ [H]
Synonym: CV_0381
Alternate gene names: 34495836
Gene position: 395868-395332 (Counterclockwise)
Preceding gene: 34495837
Following gene: 34495835
Centisome position: 8.33
GC content: 66.11
Gene sequence:
>537_bases ATGGCCCTGAACGCCACCATATACAAAGCCACCCTGACGCTGTCCGACATGGACCGCGGCTATTACGCCACCCACCCGCT GACGCTGGCCCAGCACCCGTCCGAGACGCTGGAGCGGATGATGCTGCGCATCGCCGCCTTCGCGCTCAACGCCAGCGACA CGCTGGCCTTCACCCGCGGGCTGTGCGCCGACGACGAGCCGGAGCTGTGGCAAAAGAATTACGCCGACGAAATCGAGCTG TGGGTGGACCTGGGCGAGCCGGACGAGAAGCGGCTGAAGAAGGCCTGCTCCCGCTCCGAGCGCGTGGTGCTGTACAGCTA CGGCGGCCGCGCCAGCGAAGTGTGGTGGGGCCAGAACGAGGGCAAGCTCGCCCGCCTGGACAAGCTGGAAGTGTTCCGCA TCGATTTCGACGCGCTGCAGGCGCTGGCCGCGCTCGCCGAGCGCAGCATGCAGCTGACCGCCACCATCCAGGATGGCCAG CTATGGCTGAGCTGCGGCGATCAAACCGTTCTGTTGGAGCCGATGCGGCTGAAATGA
Upstream 100 bases:
>100_bases ATGCACCAGCCAGCCCTCGCCTTGACGCCGGGCGGCGGTTAGAATCGGACGCCCTGCCGCAATGTCGCGCCGGGCGAACC CGATTCAAAAAGATCCCGCC
Downstream 100 bases:
>100_bases CGCGCCAGCCAGCCGCCCAGCCATTGCAGCAGACTCGGCCGGGGCGGCTGATAGCGGCGTCCGGCCTTGATGCCGGCCAG CAGCCGGCGCTGGCGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MALNATIYKATLTLSDMDRGYYATHPLTLAQHPSETLERMMLRIAAFALNASDTLAFTRGLCADDEPELWQKNYADEIEL WVDLGEPDEKRLKKACSRSERVVLYSYGGRASEVWWGQNEGKLARLDKLEVFRIDFDALQALAALAERSMQLTATIQDGQ LWLSCGDQTVLLEPMRLK
Sequences:
>Translated_178_residues MALNATIYKATLTLSDMDRGYYATHPLTLAQHPSETLERMMLRIAAFALNASDTLAFTRGLCADDEPELWQKNYADEIEL WVDLGEPDEKRLKKACSRSERVVLYSYGGRASEVWWGQNEGKLARLDKLEVFRIDFDALQALAALAERSMQLTATIQDGQ LWLSCGDQTVLLEPMRLK >Mature_177_residues ALNATIYKATLTLSDMDRGYYATHPLTLAQHPSETLERMMLRIAAFALNASDTLAFTRGLCADDEPELWQKNYADEIELW VDLGEPDEKRLKKACSRSERVVLYSYGGRASEVWWGQNEGKLARLDKLEVFRIDFDALQALAALAERSMQLTATIQDGQL WLSCGDQTVLLEPMRLK
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=164, Percent_Identity=52.4390243902439, Blast_Score=182, Evalue=9e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20176; Mature: 20045
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNATIYKATLTLSDMDRGYYATHPLTLAQHPSETLERMMLRIAAFALNASDTLAFTRG CCCCCEEEEEEEEEECCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCC LCADDEPELWQKNYADEIELWVDLGEPDEKRLKKACSRSERVVLYSYGGRASEVWWGQNE CCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEECCCC GKLARLDKLEVFRIDFDALQALAALAERSMQLTATIQDGQLWLSCGDQTVLLEPMRLK CCEEEECCEEEEEECHHHHHHHHHHHHCCEEEEEEEECCEEEEEECCCEEEECCCCCC >Mature Secondary Structure ALNATIYKATLTLSDMDRGYYATHPLTLAQHPSETLERMMLRIAAFALNASDTLAFTRG CCCCEEEEEEEEEECCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCC LCADDEPELWQKNYADEIELWVDLGEPDEKRLKKACSRSERVVLYSYGGRASEVWWGQNE CCCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEECCCC GKLARLDKLEVFRIDFDALQALAALAERSMQLTATIQDGQLWLSCGDQTVLLEPMRLK CCEEEECCEEEEEECHHHHHHHHHHHHCCEEEEEEEECCEEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]