| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864537
Identifier: 33864537
GI number: 33864537
Start: 2408901
End: 2409488
Strand: Direct
Name: 33864537
Synonym: PMT2273
Alternate gene names: NA
Gene position: 2408901-2409488 (Clockwise)
Preceding gene: 33864536
Following gene: 33864538
Centisome position: 99.92
GC content: 44.56
Gene sequence:
>588_bases ATGAATCAATCAAAAAAACATTCTTATCGATCTCTGATGGCTCTCTGCCTAGGTTTGGGATTAAGTCTGTTTTCAACGAT GCCGAAAGCAGAAGCAGCCAAAGAAGTGGCCTTAGTGAGTGGTGCCTTCCGCCGCTCAATCTCAGTGTCAGATTTGGAAT ATCTAGCAAAAACAGGAAAAGCCAGAGGCCTGTTAAAAGATGCCCTGAAATTCGGTCGACAAAACCCAGAAACTGTTTCC AAGCTCCTCAATAAAAAGCTAGAACTTCCTATAGGGCTTACCAGTCGATTAATGACCACCCGCATTGGCAACGTAATCAT CAACCGCATATCCAAAATCATCTACCCTCTCAACGTGCCAAACCCTTCAGTAAGCGTTCCGGCATTCAGAGCTGGAGTCA TCAATGGCATGCAAATAGGGAAAGGCGGTCTTAATGCCATCCACTTTCTAAAAGCCTATCCGAACGAAACAATGACAATA AACCTACCGGCTCTGTTTGGAATCATGCAAAAAGCTGAGTCAATCGCTGGTCTAGTGAAATTCTTTTCCGATTCGCCACT AGACGGCCTTAAGGGATCTAAGCCTTAA
Upstream 100 bases:
>100_bases TATAAAAGTTGCGCAGGGTCTCGCCGAACGTGGTGTTGTCCGTCTTGTCAAGGTAGCAGCAGGAATTTCACCCTAAATTC TGTGACTAAAGGGTTCACTA
Downstream 100 bases:
>100_bases GGCTTAGATTCCAACTAAAAACTGCTCTCTTGCTCTCTATTGGTGTCCCTCAGCCAAAACCTCCCTCAAGCTATCTCCAC AACGCCTGTGATGCAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNQSKKHSYRSLMALCLGLGLSLFSTMPKAEAAKEVALVSGAFRRSISVSDLEYLAKTGKARGLLKDALKFGRQNPETVS KLLNKKLELPIGLTSRLMTTRIGNVIINRISKIIYPLNVPNPSVSVPAFRAGVINGMQIGKGGLNAIHFLKAYPNETMTI NLPALFGIMQKAESIAGLVKFFSDSPLDGLKGSKP
Sequences:
>Translated_195_residues MNQSKKHSYRSLMALCLGLGLSLFSTMPKAEAAKEVALVSGAFRRSISVSDLEYLAKTGKARGLLKDALKFGRQNPETVS KLLNKKLELPIGLTSRLMTTRIGNVIINRISKIIYPLNVPNPSVSVPAFRAGVINGMQIGKGGLNAIHFLKAYPNETMTI NLPALFGIMQKAESIAGLVKFFSDSPLDGLKGSKP >Mature_195_residues MNQSKKHSYRSLMALCLGLGLSLFSTMPKAEAAKEVALVSGAFRRSISVSDLEYLAKTGKARGLLKDALKFGRQNPETVS KLLNKKLELPIGLTSRLMTTRIGNVIINRISKIIYPLNVPNPSVSVPAFRAGVINGMQIGKGGLNAIHFLKAYPNETMTI NLPALFGIMQKAESIAGLVKFFSDSPLDGLKGSKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21058; Mature: 21058
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSKKHSYRSLMALCLGLGLSLFSTMPKAEAAKEVALVSGAFRRSISVSDLEYLAKTGK CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCH ARGLLKDALKFGRQNPETVSKLLNKKLELPIGLTSRLMTTRIGNVIINRISKIIYPLNVP HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC NPSVSVPAFRAGVINGMQIGKGGLNAIHFLKAYPNETMTINLPALFGIMQKAESIAGLVK CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH FFSDSPLDGLKGSKP HHCCCCCCCCCCCCC >Mature Secondary Structure MNQSKKHSYRSLMALCLGLGLSLFSTMPKAEAAKEVALVSGAFRRSISVSDLEYLAKTGK CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCH ARGLLKDALKFGRQNPETVSKLLNKKLELPIGLTSRLMTTRIGNVIINRISKIIYPLNVP HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC NPSVSVPAFRAGVINGMQIGKGGLNAIHFLKAYPNETMTINLPALFGIMQKAESIAGLVK CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH FFSDSPLDGLKGSKP HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA