| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is sps [H]
Identifier: 33864532
GI number: 33864532
Start: 2398332
End: 2400464
Strand: Reverse
Name: sps [H]
Synonym: PMT2268
Alternate gene names: 33864532
Gene position: 2400464-2398332 (Counterclockwise)
Preceding gene: 33864533
Following gene: 33864526
Centisome position: 99.57
GC content: 50.68
Gene sequence:
>2133_bases ATGGGTTTGAGATTGCTTCATCTGCATCTTCATGGACTGTTTCGATCTCACGACTTGGAATTGGGTCGCGATGCTGATAC AGGAGGCCAGGCTCTTTATGTGCTCGAGCTTGTCAGGGGCCTGGCAGCGCGTTCGGAAATTGAGCAGGTTGAGGTGGTTA CCCGCTTAATTCATGATCGTCGTGTTTCTACTGACTATGCCAATCCCATTGAGGATATTGCTCCTGGGGCCAAGATCATC AGGCTGCCTTTTGGACCAAGACGATATTTGCGCAAGGAGTTGTTTTGGCCCTATTTGGATGATTTAGCGGATCAGACCGT TAGCCATCTCCAGCAGCAAGAACATCTTCCTGATTGGATTCATGCTCATTACGCCGATGCAGGCTATGTGGGAGCCCTTG TGAGTCGCAGGCTGGGTGTTCCCTTGGTGTTTACAGGTCATTCCTTGGGTAGGGAAAAGTTGCGGCGTCTGTTGGGAGTT GGTGGAGACCATGAACAGATCGAGCAAACATATGCCATTGGTCAACGTATTGATGCTGAAGAGTTCACTCTTGCTCATTG TAGTTTGGTGATTACGAGTACTCGCCAGGAAATTGATCATCAATACGCTCGCTATGGGCGTTTTGTTCCGGAGCAAGCGG AGGTGGTGCCTCCCGGCGTTGATTCCATTCGCTTCCATCCACTCCAATCTTCTAGTGAAACGGATGTTGTTGATGGATTG CTCGCGCCCTTTTTGAGGAAACCTTCTTTACCTCCTCTTTTGGCTATTTCCAGAGCTGTGCGTCGTAAGAATATTCCTTT TTTGGTGGAGGCTTACGGCCGCTCGCCTGTGTTGCGTCAACGGCATAATCTTGTGCTTGTACTCGGCTGTCGGGATGATC CTCGTCAGTTGGAGAAGCAACAGCGGGAGGTGTTCCAGCAGGTTTTTGATCTCGTGGATCGTTACGACCTCTATGGCCGG GTGGCTTATCCCAAACAGCACCGTCGTGATCAGATCCCAGCGATTTACCGATGGGCAGCCTTGCATCGTGGTTTGTTTGT GAATCCAGCGCTTACCGAGCCCTTTGGGCTCACTTTGCTTGAAGCGGCGGCCTGTGGTTTGCCGATGGTGGCGACTGATG ACGGTGGTCCACGCGACATCCTTGCTCGTTGTGACAACGGCTTGTTGGTTGACGTTACTGATCTGGAGGCACTTCAGGAT GTAATGGAGCAGGCTGGTTCAGACGCAGATCAGTGGCGTCTTTGGAGTGATAACGGGATTGTGGCGGTCAGTCGGCATTT CAGTTGGGATGCTCATGTTTGCCATTACTTGGCATTGATGAAGCAACGTCTTGAATTGTCTCAGCCACGAATCTGGGCCA CAGATAAAGAGTGTCTGGGCAGTCCACTGGGGCAGAGTTTGTTGTTGCTTGATCTTGATAGTTCTCTCGAAGAACCCGAG GCAGAGGGTTTGGCTTCGCTGCGGGAGGGATTGGAATCCATTGGCTCTGGCGATGCGCATGGTCTGGGAGTATTGACGGG TCGTTCTGTGCAGGCTGCAAAAAAGCGTTATGCAGAGCTGAATCTTCCTTCTCCTCGGGTTTGGATTAGTCGCGCGGGTA CTGAAATCCATTACGGATTGGAGGATCAGTCGGATCGCTTTTGGCAGGCCCATATCGACGTTGATTGGCGGCGACAGGCA GTGGTGTCTGCTTTAGCTGATCTCAAGGACCATTTGACGCTTCAGGACGATCAGGAGCAGGGTCCTCACAAGGTGAGTTA TCTATTGAAAGAGCATGGTGAGGCGATTTTGCCACTCGTCCGTCAGCGTTTAAGGCAAAGGAGTCAGGCGGCACGTCCTC ATTTGCGTTGTCATTGGTTTTTGGATGTGGTGCCTTTGCGAGCTTCCCGAAGCGAAGCCATTCGCTATCTCTCTCTTCGT TGGGGATTACCTCTTGAGCAGATTTTGGTTGTTGCCAGTCAACAAGGTGATGCTGAATTGGTAAGGGGATTGACTGCTTC AGTAGTCCTTGCAGAGCATGATCCTTGTCTGGAGGGTTTGCGACATCAGCAACGAGTGTTTTTTGCTAACAACCCGCATT TGTTTGGACTTTTAGATGGCTTAAATCACTATCGATTTTTCTTAAAGTCTTAA
Upstream 100 bases:
>100_bases CTCATCCTTTCTTTAGGCTTATGAGGATGGAAGTTCCTTGATTATTTCTTGATGGCCATCCGCATCTGGATGGTTTCGTT GATCGCCTTGGAGGCATCAG
Downstream 100 bases:
>100_bases CTGACACCCTTACCCTTTTATTACCTGGATGGATGCGGCGGCTCGATCAGCTTTAGAGCGAACTGCTTCCATAGACTTGC CTTTTGCTAAAGCAACCCCC
Product: sucrose phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MGLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDRRVSTDYANPIEDIAPGAKII RLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWIHAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGV GGDHEQIEQTYAIGQRIDAEEFTLAHCSLVITSTRQEIDHQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL LAPFLRKPSLPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQQREVFQQVFDLVDRYDLYGR VAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLLEAAACGLPMVATDDGGPRDILARCDNGLLVDVTDLEALQD VMEQAGSDADQWRLWSDNGIVAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGQSLLLLDLDSSLEEPE AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELNLPSPRVWISRAGTEIHYGLEDQSDRFWQAHIDVDWRRQA VVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLVRQRLRQRSQAARPHLRCHWFLDVVPLRASRSEAIRYLSLR WGLPLEQILVVASQQGDAELVRGLTASVVLAEHDPCLEGLRHQQRVFFANNPHLFGLLDGLNHYRFFLKS
Sequences:
>Translated_710_residues MGLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDRRVSTDYANPIEDIAPGAKII RLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWIHAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGV GGDHEQIEQTYAIGQRIDAEEFTLAHCSLVITSTRQEIDHQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL LAPFLRKPSLPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQQREVFQQVFDLVDRYDLYGR VAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLLEAAACGLPMVATDDGGPRDILARCDNGLLVDVTDLEALQD VMEQAGSDADQWRLWSDNGIVAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGQSLLLLDLDSSLEEPE AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELNLPSPRVWISRAGTEIHYGLEDQSDRFWQAHIDVDWRRQA VVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLVRQRLRQRSQAARPHLRCHWFLDVVPLRASRSEAIRYLSLR WGLPLEQILVVASQQGDAELVRGLTASVVLAEHDPCLEGLRHQQRVFFANNPHLFGLLDGLNHYRFFLKS >Mature_709_residues GLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDRRVSTDYANPIEDIAPGAKIIR LPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWIHAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGVG GDHEQIEQTYAIGQRIDAEEFTLAHCSLVITSTRQEIDHQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGLL APFLRKPSLPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQQREVFQQVFDLVDRYDLYGRV AYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLLEAAACGLPMVATDDGGPRDILARCDNGLLVDVTDLEALQDV MEQAGSDADQWRLWSDNGIVAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGQSLLLLDLDSSLEEPEA EGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELNLPSPRVWISRAGTEIHYGLEDQSDRFWQAHIDVDWRRQAV VSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLVRQRLRQRSQAARPHLRCHWFLDVVPLRASRSEAIRYLSLRW GLPLEQILVVASQQGDAELVRGLTASVVLAEHDPCLEGLRHQQRVFFANNPHLFGLLDGLNHYRFFLKS
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 80332; Mature: 80200
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDR CCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVSTDYANPIEDIAPGAKIIRLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWI CCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH HAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGVGGDHEQIEQTYAIGQRIDAE HHHCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH EFTLAHCSLVITSTRQEIDHQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL HHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH LAPFLRKPSLPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQ HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCHHHHHHH QREVFQQVFDLVDRYDLYGRVAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLL HHHHHHHHHHHHHHHHHCCEECCCHHHHCCCCHHHHHHHHHHCCEEECCCCCCCCCHHHH EAAACGLPMVATDDGGPRDILARCDNGLLVDVTDLEALQDVMEQAGSDADQWRLWSDNGI HHHHCCCCEEECCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHEEEECCCCE VAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGQSLLLLDLDSSLEEPE EEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCEEEEEECCCCCCCCH AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELNLPSPRVWISRAGTEIHYGL HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECC EDQSDRFWQAHIDVDWRRQAVVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLV CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH RQRLRQRSQAARPHLRCHWFLDVVPLRASRSEAIRYLSLRWGLPLEQILVVASQQGDAEL HHHHHHHHHHCCCCCEEEEEEEEHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHH VRGLTASVVLAEHDPCLEGLRHQQRVFFANNPHLFGLLDGLNHYRFFLKS HHCCHHEEEEECCCHHHHHHHHHCEEEEECCCCEEEHHHCHHHHHHHCCC >Mature Secondary Structure GLRLLHLHLHGLFRSHDLELGRDADTGGQALYVLELVRGLAARSEIEQVEVVTRLIHDR CEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVSTDYANPIEDIAPGAKIIRLPFGPRRYLRKELFWPYLDDLADQTVSHLQQQEHLPDWI CCCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH HAHYADAGYVGALVSRRLGVPLVFTGHSLGREKLRRLLGVGGDHEQIEQTYAIGQRIDAE HHHCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH EFTLAHCSLVITSTRQEIDHQYARYGRFVPEQAEVVPPGVDSIRFHPLQSSSETDVVDGL HHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH LAPFLRKPSLPPLLAISRAVRRKNIPFLVEAYGRSPVLRQRHNLVLVLGCRDDPRQLEKQ HHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCEEEEEECCCCHHHHHHH QREVFQQVFDLVDRYDLYGRVAYPKQHRRDQIPAIYRWAALHRGLFVNPALTEPFGLTLL HHHHHHHHHHHHHHHHHCCEECCCHHHHCCCCHHHHHHHHHHCCEEECCCCCCCCCHHHH EAAACGLPMVATDDGGPRDILARCDNGLLVDVTDLEALQDVMEQAGSDADQWRLWSDNGI HHHHCCCCEEECCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHEEEECCCCE VAVSRHFSWDAHVCHYLALMKQRLELSQPRIWATDKECLGSPLGQSLLLLDLDSSLEEPE EEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCEEEEEECCCCCCCCH AEGLASLREGLESIGSGDAHGLGVLTGRSVQAAKKRYAELNLPSPRVWISRAGTEIHYGL HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECC EDQSDRFWQAHIDVDWRRQAVVSALADLKDHLTLQDDQEQGPHKVSYLLKEHGEAILPLV CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH RQRLRQRSQAARPHLRCHWFLDVVPLRASRSEAIRYLSLRWGLPLEQILVVASQQGDAEL HHHHHHHHHHCCCCCEEEEEEEEHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHH VRGLTASVVLAEHDPCLEGLRHQQRVFFANNPHLFGLLDGLNHYRFFLKS HHCCHHEEEEECCCHHHHHHHHHCEEEEECCCCEEEHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]