| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864469
Identifier: 33864469
GI number: 33864469
Start: 2331232
End: 2332554
Strand: Reverse
Name: 33864469
Synonym: PMT2205
Alternate gene names: NA
Gene position: 2332554-2331232 (Counterclockwise)
Preceding gene: 33864470
Following gene: 33864466
Centisome position: 96.75
GC content: 56.01
Gene sequence:
>1323_bases ATGAAGCAAAAGATGTGGGTGCTGCTAACAAGTTTCGCGGCTCTGGTACTGGTGCAACAGCAATTGCTGCTGAGCCGTCC ACCCCGATTGCTGTCACGCACACCGCAGCCCCTTCAGTCAGGTAGTGCTGCCCTTGACCTTCGCTTCAGTCGGCCGATGC AACTGGGGAGCGTGGCGGCAGATAGTCAACTACAACCGGACCTAGTTCACCGTTGGCAGGGGGAGAACAATCTTCTGCGT TTGTTGATTGATGCCAATCAGAGAATCAAGGCTTCAATTCAGCTGACGGTTGCTGGACAGGATCATCGAGCCCAGGCTCT ACCTCCCCAACACTGGTGGTGGGATCCGAGACCCTGGCTGTTAGTGAATCGCCAGGTGGATGGCGGAGACCAACTGCAAG TCCAGAGCCGCGATGGGCGTTGGATACCCCTGAGCCCCACGCTGAATCAGATTCAGAGAGTTGTTCCCCTTGGCAATGGC AAGGGAGCCGCCTTGATCGAAAGGGATAAGGACTGGAAGCAACGACTCTTTTTGCTGCCTTTGTTGCCACGCAATATCAC GGCTCATCGCGATCAGCTCGCTGCTCCAAAGGCAGGGAAATTGATGCCATTAGTGCCAGGGCAATATCTTTTTGCTGATC TCAGCAGCAACCTGAACGGTGACCTGCTTGCGCAAACAGGAGGATTCACTCCAGGAAGTGGACGCACTGAACTGATCAAA GCGGATGGCCAGAGAAGAACCCTTGAGATCAAAGCCTCCGGTCCGATCCAGCTGCTGCCGGCCGGTGGTGGAGCGGTTGT GCCCACCTTCAACGGGCTGACACTGCGTCCATTGATTGAAAACTACAAGACCCCCCAACTCCTCCCCGGGGCAAGGGATC TCGGAGATTTCTGCCAAGCCACGGGCAGGGCAGTGCTCATCCGCCATTGGCCGGACTATCGCCGTTCCATTGAGTTGGTG ATTCCAGGATTGTCCCCTAAGCAGCTCTGGCTTGGCGAAGAGTCAGTGCTGGCCTTGAGTTGTGATAACAGGGGCGAACG TGTTTGGGCGGTTCTTGGTCGCAGGCAGGATCGCCGCATGCAACATGAGCTTGTTCTACTGGATGGCGACGGCTTGGTAC TGGGCCGCCGCCAACTAGCACCATGGACTTTTAAGCCACGTTCAATGCTGCAGTTTGACCCTGTGGGCGAACAGTTGTTG ATGACCGTCACCAAGCCAGGATGGGATGCAGGTCGAGCGGCTCTGATGGATGCCACCACGCTTGAATGGCTCAAGGTATT GCCAATACGAATTAAGGAGGCACTTTGGTTGTCCGCAGGGTGA
Upstream 100 bases:
>100_bases AAGGGCATATGAAGGTGGAAACACGTCAGGGCCAGAGAGTCGCCGTTGTGGTTCCCGAGACAATCACCCCGATTCCAAGG CCGGAACGACCACTGGAACC
Downstream 100 bases:
>100_bases TCTATCGCTGTTGGCTTAGAAGCTGAATGTGACGCCGGTGCCGATGTGGTGCTGCCAGCCTTCACCCCAGCCTGAGCCTC CTTCTGAACTGTAGGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKQKMWVLLTSFAALVLVQQQLLLSRPPRLLSRTPQPLQSGSAALDLRFSRPMQLGSVAADSQLQPDLVHRWQGENNLLR LLIDANQRIKASIQLTVAGQDHRAQALPPQHWWWDPRPWLLVNRQVDGGDQLQVQSRDGRWIPLSPTLNQIQRVVPLGNG KGAALIERDKDWKQRLFLLPLLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFTPGSGRTELIK ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQLLPGARDLGDFCQATGRAVLIRHWPDYRRSIELV IPGLSPKQLWLGEESVLALSCDNRGERVWAVLGRRQDRRMQHELVLLDGDGLVLGRRQLAPWTFKPRSMLQFDPVGEQLL MTVTKPGWDAGRAALMDATTLEWLKVLPIRIKEALWLSAG
Sequences:
>Translated_440_residues MKQKMWVLLTSFAALVLVQQQLLLSRPPRLLSRTPQPLQSGSAALDLRFSRPMQLGSVAADSQLQPDLVHRWQGENNLLR LLIDANQRIKASIQLTVAGQDHRAQALPPQHWWWDPRPWLLVNRQVDGGDQLQVQSRDGRWIPLSPTLNQIQRVVPLGNG KGAALIERDKDWKQRLFLLPLLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFTPGSGRTELIK ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQLLPGARDLGDFCQATGRAVLIRHWPDYRRSIELV IPGLSPKQLWLGEESVLALSCDNRGERVWAVLGRRQDRRMQHELVLLDGDGLVLGRRQLAPWTFKPRSMLQFDPVGEQLL MTVTKPGWDAGRAALMDATTLEWLKVLPIRIKEALWLSAG >Mature_440_residues MKQKMWVLLTSFAALVLVQQQLLLSRPPRLLSRTPQPLQSGSAALDLRFSRPMQLGSVAADSQLQPDLVHRWQGENNLLR LLIDANQRIKASIQLTVAGQDHRAQALPPQHWWWDPRPWLLVNRQVDGGDQLQVQSRDGRWIPLSPTLNQIQRVVPLGNG KGAALIERDKDWKQRLFLLPLLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFTPGSGRTELIK ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQLLPGARDLGDFCQATGRAVLIRHWPDYRRSIELV IPGLSPKQLWLGEESVLALSCDNRGERVWAVLGRRQDRRMQHELVLLDGDGLVLGRRQLAPWTFKPRSMLQFDPVGEQLL MTVTKPGWDAGRAALMDATTLEWLKVLPIRIKEALWLSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49116; Mature: 49116
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKMWVLLTSFAALVLVQQQLLLSRPPRLLSRTPQPLQSGSAALDLRFSRPMQLGSVAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCEEEEEEECCCCCCCCCCC DSQLQPDLVHRWQGENNLLRLLIDANQRIKASIQLTVAGQDHRAQALPPQHWWWDPRPWL CCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEE LVNRQVDGGDQLQVQSRDGRWIPLSPTLNQIQRVVPLGNGKGAALIERDKDWKQRLFLLP EEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHEECCCCCCCEEEECCCCHHHEEEEEE LLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFTPGSGRTELIK CCCCCCCCCHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEEEEE ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQLLPGARDLGDFCQA CCCCEEEEEEEECCCEEEEECCCCEEEECCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHH TGRAVLIRHWPDYRRSIELVIPGLSPKQLWLGEESVLALSCDNRGERVWAVLGRRQDRRM CCCEEEEEECCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCHHCCC QHELVLLDGDGLVLGRRQLAPWTFKPRSMLQFDPVGEQLLMTVTKPGWDAGRAALMDATT EEEEEEECCCCEEEECCCCCCCEECCCCCEEECCCCCEEEEEEECCCCCCCCEEHHHHHH LEWLKVLPIRIKEALWLSAG HHHHHHHHHHEEEEEEECCC >Mature Secondary Structure MKQKMWVLLTSFAALVLVQQQLLLSRPPRLLSRTPQPLQSGSAALDLRFSRPMQLGSVAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCEEEEEEECCCCCCCCCCC DSQLQPDLVHRWQGENNLLRLLIDANQRIKASIQLTVAGQDHRAQALPPQHWWWDPRPWL CCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEE LVNRQVDGGDQLQVQSRDGRWIPLSPTLNQIQRVVPLGNGKGAALIERDKDWKQRLFLLP EEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHEECCCCCCCEEEECCCCHHHEEEEEE LLPRNITAHRDQLAAPKAGKLMPLVPGQYLFADLSSNLNGDLLAQTGGFTPGSGRTELIK CCCCCCCCCHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEEEEE ADGQRRTLEIKASGPIQLLPAGGGAVVPTFNGLTLRPLIENYKTPQLLPGARDLGDFCQA CCCCEEEEEEEECCCEEEEECCCCEEEECCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHH TGRAVLIRHWPDYRRSIELVIPGLSPKQLWLGEESVLALSCDNRGERVWAVLGRRQDRRM CCCEEEEEECCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCHHCCC QHELVLLDGDGLVLGRRQLAPWTFKPRSMLQFDPVGEQLLMTVTKPGWDAGRAALMDATT EEEEEEECCCCEEEECCCCCCCEECCCCCEEECCCCCEEEEEEECCCCCCCCEEHHHHHH LEWLKVLPIRIKEALWLSAG HHHHHHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA