| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864451
Identifier: 33864451
GI number: 33864451
Start: 2312279
End: 2313994
Strand: Direct
Name: 33864451
Synonym: PMT2187
Alternate gene names: NA
Gene position: 2312279-2313994 (Clockwise)
Preceding gene: 33864449
Following gene: 33864457
Centisome position: 95.91
GC content: 55.77
Gene sequence:
>1716_bases TTGGCGATGCGTCGGCGCAAACTTCTGCAGCAAGCCTCGTTGGCCACTCTCTCCGCCCTAGGCCTACCAGCACTTTGGCG ACAAGCCAAAGCTAAAAACACAACAGCAGCCATCAAGGAGTTACAACGACGCCTCGGCACTCGACTGATCAGGCCCAAAC TTCCCTGGGCAAACCTACTAGCGAAAACCCCAGTCCCCGTGGAACTCAAAAATCCCTGGGCACTGAGCAGCCAAGCTGGT GGCACTCAATCAACCGGCATGGTGGGCGCCTGGACCGCCCAAGCCAGTCATAACGCTGTGCGTGTTGGCAGCAAAGCAGA CGTTGCCACTGCTGTAGATGTGGCCCGACTCCACAACTTGCGCTTAGTGATCAAAGGCATGGGTGGCGATTACTTCGGAC GCTCGAGCGGACCGCCAAACTCCCTGCTGATCTGGACCCATGACCTCAACGCAATCACAACACATCAAAGCTTCACCCCA GAAGGTGCTCCTGCTTCTCAGCCACCAGTCACTGCCCTCACCGTCAGCGCTGGCAATGCCTGGCTCCACGCCTATCAAGC AGCAACTGCCGCCGGGCTCTATGTGCAGGGCGGAGGGTGCACAACCGTAGGAGCATGTGGAGGCTTTAGCCAAGGAGGTG GCTTTGGTAGCTACTCCAAACGCTTCGGCAGTGGAGCTGCCGGTGTGCTGCAAATGGAGGTCGTGACCGCCGATGGTCAG TTGCGTACCGTCAACGCCTTCCAAGAACCAGACCTCTGCTGGGCCCTAAAAGGTGGAGGTGGTGGCACCTACGGAGTCGT AGTCAGCCAAACTTTGCTCGCCCATCCGATACCTCGACTCGATGGCTGGATCTCCGGCTGGATAGAAGCAAGCGACGATG GCGCCCTTGAAGAGTTACTGACGAATTACCTAGAACTGGTTCAAAAGTCCCTGATCAATCCCAACTGGGGAGAAGGTGTC GTGATTGAGCCAGGCCAAAGACGTCTACAGATGATGACGTCATTTATCGACCTCGAGGCCAACGAAGCTGAAGCCATCTG GACACCCTTACTAAAGCAATTGAAAAGCAAGCCACATGCCTTCGACGTTCAAGTCCATTTCCATGCCGTGCCGTTTGAGA ACAAATGGCGACCTCAAGCAGATGCTGTGCATTGGGATCGCCGAGATGGGGCACCATCAGGACAATTCTGGTGGAAAGGA AACCAAAATGAAGTAGGTGCTTACTGGGGTGGCTACCAGGGCCGAGGTGTACCCATGAGTGCTCTAGAAGGCGAATCACT ACACCGATTAGCGAAAGCATTCGTAAGCGCAAGCCGCACCAGTTTCTTACTGTTCCAGACCAGCAAAGGCCTCGCTGGAA TCTCTCCGGAAGCTGAATCCCGTCAGCGACAAACGTCAATGAACCCGGCTGTACTCAATGATGCCGGCTACGTCACACTC GCAAATTGGACGCAATACCGCTACCCGGGCATCAGCGGCCATCAGCCAAACCCAAGAGAAAGCCTCAAGCAACAACAGGA TGTGGATCGTGCCATGGCCTTCATTCGCGCCGCCACCCCTGGCGGCAGCTCCTATGTGAATGAAGGGAATTTCTTCGAAC CAAACTGGAAGCAGGAGTTCTGGGGCCCGAACTACGAGCGCCTTCTGGGTATCAAGCGACGTTACGACCCAACCAATCTT TTCCGAGTACACCATGGGGTCGGAAGCGACACCTAA
Upstream 100 bases:
>100_bases CAAGAAAGGCAGCCAAGACTCCAACCAAGTCCCTGGATCAATCAACACAAGCAATCTGCATGCAACACCAATACCTCTCA TACTCAAGATTCATGCTGAG
Downstream 100 bases:
>100_bases ATCCAAGCCTCAAACCAATGCCCACCAGCAAGACACATCAACTCGAAGCTGATGTGTAATAGCGCAAAGCGAACAACCAA AAAGCCCGGCTTCCAACAAA
Product: FAD linked oxidase, N-terminal
Products: NA
Alternate protein names: FAD Linked Oxidase N-Terminal; FAD Linked Oxidase; Fad/Fmn-Containing Dehydrogenase Protein
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MAMRRRKLLQQASLATLSALGLPALWRQAKAKNTTAAIKELQRRLGTRLIRPKLPWANLLAKTPVPVELKNPWALSSQAG GTQSTGMVGAWTAQASHNAVRVGSKADVATAVDVARLHNLRLVIKGMGGDYFGRSSGPPNSLLIWTHDLNAITTHQSFTP EGAPASQPPVTALTVSAGNAWLHAYQAATAAGLYVQGGGCTTVGACGGFSQGGGFGSYSKRFGSGAAGVLQMEVVTADGQ LRTVNAFQEPDLCWALKGGGGGTYGVVVSQTLLAHPIPRLDGWISGWIEASDDGALEELLTNYLELVQKSLINPNWGEGV VIEPGQRRLQMMTSFIDLEANEAEAIWTPLLKQLKSKPHAFDVQVHFHAVPFENKWRPQADAVHWDRRDGAPSGQFWWKG NQNEVGAYWGGYQGRGVPMSALEGESLHRLAKAFVSASRTSFLLFQTSKGLAGISPEAESRQRQTSMNPAVLNDAGYVTL ANWTQYRYPGISGHQPNPRESLKQQQDVDRAMAFIRAATPGGSSYVNEGNFFEPNWKQEFWGPNYERLLGIKRRYDPTNL FRVHHGVGSDT
Sequences:
>Translated_571_residues MAMRRRKLLQQASLATLSALGLPALWRQAKAKNTTAAIKELQRRLGTRLIRPKLPWANLLAKTPVPVELKNPWALSSQAG GTQSTGMVGAWTAQASHNAVRVGSKADVATAVDVARLHNLRLVIKGMGGDYFGRSSGPPNSLLIWTHDLNAITTHQSFTP EGAPASQPPVTALTVSAGNAWLHAYQAATAAGLYVQGGGCTTVGACGGFSQGGGFGSYSKRFGSGAAGVLQMEVVTADGQ LRTVNAFQEPDLCWALKGGGGGTYGVVVSQTLLAHPIPRLDGWISGWIEASDDGALEELLTNYLELVQKSLINPNWGEGV VIEPGQRRLQMMTSFIDLEANEAEAIWTPLLKQLKSKPHAFDVQVHFHAVPFENKWRPQADAVHWDRRDGAPSGQFWWKG NQNEVGAYWGGYQGRGVPMSALEGESLHRLAKAFVSASRTSFLLFQTSKGLAGISPEAESRQRQTSMNPAVLNDAGYVTL ANWTQYRYPGISGHQPNPRESLKQQQDVDRAMAFIRAATPGGSSYVNEGNFFEPNWKQEFWGPNYERLLGIKRRYDPTNL FRVHHGVGSDT >Mature_570_residues AMRRRKLLQQASLATLSALGLPALWRQAKAKNTTAAIKELQRRLGTRLIRPKLPWANLLAKTPVPVELKNPWALSSQAGG TQSTGMVGAWTAQASHNAVRVGSKADVATAVDVARLHNLRLVIKGMGGDYFGRSSGPPNSLLIWTHDLNAITTHQSFTPE GAPASQPPVTALTVSAGNAWLHAYQAATAAGLYVQGGGCTTVGACGGFSQGGGFGSYSKRFGSGAAGVLQMEVVTADGQL RTVNAFQEPDLCWALKGGGGGTYGVVVSQTLLAHPIPRLDGWISGWIEASDDGALEELLTNYLELVQKSLINPNWGEGVV IEPGQRRLQMMTSFIDLEANEAEAIWTPLLKQLKSKPHAFDVQVHFHAVPFENKWRPQADAVHWDRRDGAPSGQFWWKGN QNEVGAYWGGYQGRGVPMSALEGESLHRLAKAFVSASRTSFLLFQTSKGLAGISPEAESRQRQTSMNPAVLNDAGYVTLA NWTQYRYPGISGHQPNPRESLKQQQDVDRAMAFIRAATPGGSSYVNEGNFFEPNWKQEFWGPNYERLLGIKRRYDPTNLF RVHHGVGSDT
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62035; Mature: 61903
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRRRKLLQQASLATLSALGLPALWRQAKAKNTTAAIKELQRRLGTRLIRPKLPWANLL CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH AKTPVPVELKNPWALSSQAGGTQSTGMVGAWTAQASHNAVRVGSKADVATAVDVARLHNL HCCCCCEEECCCEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCE RLVIKGMGGDYFGRSSGPPNSLLIWTHDLNAITTHQSFTPEGAPASQPPVTALTVSAGNA EEEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCH WLHAYQAATAAGLYVQGGGCTTVGACGGFSQGGGFGSYSKRFGSGAAGVLQMEVVTADGQ HHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCC LRTVNAFQEPDLCWALKGGGGGTYGVVVSQTLLAHPIPRLDGWISGWIEASDDGALEELL EEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCHHCHHHHCCEECCCCHHHHHHH TNYLELVQKSLINPNWGEGVVIEPGQRRLQMMTSFIDLEANEAEAIWTPLLKQLKSKPHA HHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE FDVQVHFHAVPFENKWRPQADAVHWDRRDGAPSGQFWWKGNQNEVGAYWGGYQGRGVPMS EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCHH ALEGESLHRLAKAFVSASRTSFLLFQTSKGLAGISPEAESRQRQTSMNPAVLNDAGYVTL HCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEE ANWTQYRYPGISGHQPNPRESLKQQQDVDRAMAFIRAATPGGSSYVNEGNFFEPNWKQEF ECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH WGPNYERLLGIKRRYDPTNLFRVHHGVGSDT CCCCHHHHHHHHHCCCCCCEEEEECCCCCCC >Mature Secondary Structure AMRRRKLLQQASLATLSALGLPALWRQAKAKNTTAAIKELQRRLGTRLIRPKLPWANLL CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH AKTPVPVELKNPWALSSQAGGTQSTGMVGAWTAQASHNAVRVGSKADVATAVDVARLHNL HCCCCCEEECCCEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCE RLVIKGMGGDYFGRSSGPPNSLLIWTHDLNAITTHQSFTPEGAPASQPPVTALTVSAGNA EEEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCH WLHAYQAATAAGLYVQGGGCTTVGACGGFSQGGGFGSYSKRFGSGAAGVLQMEVVTADGQ HHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCC LRTVNAFQEPDLCWALKGGGGGTYGVVVSQTLLAHPIPRLDGWISGWIEASDDGALEELL EEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCCHHCHHHHCCEECCCCHHHHHHH TNYLELVQKSLINPNWGEGVVIEPGQRRLQMMTSFIDLEANEAEAIWTPLLKQLKSKPHA HHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCE FDVQVHFHAVPFENKWRPQADAVHWDRRDGAPSGQFWWKGNQNEVGAYWGGYQGRGVPMS EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCHH ALEGESLHRLAKAFVSASRTSFLLFQTSKGLAGISPEAESRQRQTSMNPAVLNDAGYVTL HCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEE ANWTQYRYPGISGHQPNPRESLKQQQDVDRAMAFIRAATPGGSSYVNEGNFFEPNWKQEF ECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH WGPNYERLLGIKRRYDPTNLFRVHHGVGSDT CCCCHHHHHHHHHCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA