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The map label for this gene is ydjX [C]

Identifier: 33864450

GI number: 33864450

Start: 2311603

End: 2312259

Strand: Reverse

Name: ydjX [C]

Synonym: PMT2186

Alternate gene names: 33864450

Gene position: 2312259-2311603 (Counterclockwise)

Preceding gene: 33864452

Following gene: 33864446

Centisome position: 95.91

GC content: 54.95

Gene sequence:

>657_bases
ATGAGAGGTATTGGTGTTGCATGCAGATTGCTTGTGTTGATTGATCCAGGGACTTGGTTGGAGTCTTGGCTGCCTTTCTT
GCAGACACCTATTGGTGCAGTTCTATTTGTGCCTCTCTATGCAGTTTGGGTCACCTTGTTGCTGCCAGGGGTCTGGGCCT
CGATGCTTGCAGGTGCGCTCTTCGGGACTGGGTTAGGAAGTTTGCTGGTGTTTGTCGGAGCCTGCCTGGGTGCAGAGGTA
TCCTTTCTGCTTGGACGTTACTGGCTAAGGAATTGGGCTCGACGTCGCTTGGCAGTTGTGCCAAAACTGCAGGCTGTTGA
GAAGGCCGTGAGTCGTGAGGGGCTCAAGTTGGTGCTCTTAACGCGCCTGTCTCCGGCGTTCCCTTTTAGTGTGCTCAACC
TTGCATATGGCCTCAGTGAGGTGAGCCTGCGGGACTATTCGATCGGTTTGATCGGCATTCTTCCCGGCACTGTTTTGTTT
TGTGGTTTTGGTGCACTGGCTGGAGATGTGGCGCGATTTGGCGATGTCCTCTCTGGCCAGGCTGACCCGGCCACCTGGAC
TCTCAGGATTGTTGGGGTGTTGGCCACGGTTGTGGTGGTATGGCTGGTAGGCCTTGCAGCCAAGCGAGCTCTTCAGGATT
CAGAGCCATCCAGTTGA

Upstream 100 bases:

>100_bases
TCGCCAAAGTGCTGGTAGGCCTAGGGCGGAGAGAGTGGCCAACGAGGCTTGCTGCAGAAGTTTGCGCCGACGCATCGCCA
ACTCAGCATGAATCTTGAGT

Downstream 100 bases:

>100_bases
TCTGGGTTGTCTAGCTGCCAGTCTTTGAGGGCGGCAAAGAACACGAACCAGCTCAGCCGGAGGCGTGCAAGCACCCCAGT
GCGTTGAGCCAGATCTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRGIGVACRLLVLIDPGTWLESWLPFLQTPIGAVLFVPLYAVWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAEV
SFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLF
CGFGALAGDVARFGDVLSGQADPATWTLRIVGVLATVVVVWLVGLAAKRALQDSEPSS

Sequences:

>Translated_218_residues
MRGIGVACRLLVLIDPGTWLESWLPFLQTPIGAVLFVPLYAVWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAEV
SFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLF
CGFGALAGDVARFGDVLSGQADPATWTLRIVGVLATVVVVWLVGLAAKRALQDSEPSS
>Mature_218_residues
MRGIGVACRLLVLIDPGTWLESWLPFLQTPIGAVLFVPLYAVWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAEV
SFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLF
CGFGALAGDVARFGDVLSGQADPATWTLRIVGVLATVVVVWLVGLAAKRALQDSEPSS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=161, Percent_Identity=36.0248447204969, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23263; Mature: 23263

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIGVACRLLVLIDPGTWLESWLPFLQTPIGAVLFVPLYAVWVTLLLPGVWASMLAGAL
CCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGTGLGSLLVFVGACLGAEVSFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH
TRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSGQ
HHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ADPATWTLRIVGVLATVVVVWLVGLAAKRALQDSEPSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRGIGVACRLLVLIDPGTWLESWLPFLQTPIGAVLFVPLYAVWVTLLLPGVWASMLAGAL
CCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGTGLGSLLVFVGACLGAEVSFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH
TRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSGQ
HHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ADPATWTLRIVGVLATVVVVWLVGLAAKRALQDSEPSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]