| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864444
Identifier: 33864444
GI number: 33864444
Start: 2307112
End: 2307561
Strand: Direct
Name: 33864444
Synonym: PMT2180
Alternate gene names: NA
Gene position: 2307112-2307561 (Clockwise)
Preceding gene: 33864443
Following gene: 33864447
Centisome position: 95.7
GC content: 55.11
Gene sequence:
>450_bases ATGGCACCCTCCCCAAGCTGGCTGAGCCTCACTGATCTGGGACGCATCTACGGCATCTCAGCAATCAATTGCGGCCGAGC ACTACAACTGCAAGGCTTGCGCGATCGACATGGACGACCAACTCCAGGAGCCCTTGAGACTGGTGCAGCCCATAAGCACG GTCCACAAACCCCTCCACGCACAGCTCTCTGGAACGCCAAAATCTGCAAAGGCTTGCTTGAGAAAAGCGGCTACCAACCC ATCAACCGAACACTTCAGGTGGAGCAATGGGCCGAACTACTTGAGGCCCTTGAAGAGGGATCGCCCTCCATCAATGCAAC AGCAGAGCAAATGGCTGAAGATCTACCTGAAGAACTGGTAGGTGACGTCAATGATCAACTCGCACTGCGAGGCTGCCATT TTCGCGTAGCGCACAAACCACATCAAGCATCTTTGAGCGCTGCAGCCTGA
Upstream 100 bases:
>100_bases ACTCTGTTCATGACCAGAGCTCTCGATTTGTCGATTTTTAACTTGACAACTTGCCAACTCTTGTGCTTTCGGGAAGATTA TTCAAGCGGTTCCCCTCTCC
Downstream 100 bases:
>100_bases TTGAATCGCGCAGGCTCAATCTCGCCGACGACTGGAACGCGGCAAAGGTCTCCGCTCCAGCGGTCGCTTCAATGATTCTG ATGCGCTTCGGTTTGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAPSPSWLSLTDLGRIYGISAINCGRALQLQGLRDRHGRPTPGALETGAAHKHGPQTPPRTALWNAKICKGLLEKSGYQP INRTLQVEQWAELLEALEEGSPSINATAEQMAEDLPEELVGDVNDQLALRGCHFRVAHKPHQASLSAAA
Sequences:
>Translated_149_residues MAPSPSWLSLTDLGRIYGISAINCGRALQLQGLRDRHGRPTPGALETGAAHKHGPQTPPRTALWNAKICKGLLEKSGYQP INRTLQVEQWAELLEALEEGSPSINATAEQMAEDLPEELVGDVNDQLALRGCHFRVAHKPHQASLSAAA >Mature_148_residues APSPSWLSLTDLGRIYGISAINCGRALQLQGLRDRHGRPTPGALETGAAHKHGPQTPPRTALWNAKICKGLLEKSGYQPI NRTLQVEQWAELLEALEEGSPSINATAEQMAEDLPEELVGDVNDQLALRGCHFRVAHKPHQASLSAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16088; Mature: 15957
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSPSWLSLTDLGRIYGISAINCGRALQLQGLRDRHGRPTPGALETGAAHKHGPQTPPR CCCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCC TALWNAKICKGLLEKSGYQPINRTLQVEQWAELLEALEEGSPSINATAEQMAEDLPEELV CHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GDVNDQLALRGCHFRVAHKPHQASLSAAA CCCCCHHHHHCCEEEECCCCCCCCCCCCC >Mature Secondary Structure APSPSWLSLTDLGRIYGISAINCGRALQLQGLRDRHGRPTPGALETGAAHKHGPQTPPR CCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCC TALWNAKICKGLLEKSGYQPINRTLQVEQWAELLEALEEGSPSINATAEQMAEDLPEELV CHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GDVNDQLALRGCHFRVAHKPHQASLSAAA CCCCCHHHHHCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA