| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864443
Identifier: 33864443
GI number: 33864443
Start: 2306488
End: 2307024
Strand: Direct
Name: 33864443
Synonym: PMT2179
Alternate gene names: NA
Gene position: 2306488-2307024 (Clockwise)
Preceding gene: 33864442
Following gene: 33864444
Centisome position: 95.67
GC content: 55.31
Gene sequence:
>537_bases GTGCTCTCTGGTGAAGGCCCCTGGCAACTTCCCGGACCCTGGCGATTGATGCTGCTTGGGGATGGCAGCCCAACCCGCCA CCTGAGACTGCTCACAGGCCATGAAGTGCAAGTCAACCTCATTGCCATGCAACCGGAACCCAATCCTGATGCAACAGCCC CGCAGGAAGTTCGCGAACTCAAACCACCTTTACTAAGGCGCCAGGTGTGGTTGATCTGCGACTCCCATACCCTGGCCTGG GCAGAAAGCTGGTGGAATTTCGATGAAGCCGAAAAGCATCTCCACAATCGCAATCAACCCATCTGGGACAGTCTCACAAA AGGCCGTTCCGAACTGTTTCGTGAAGTCGACGGACTGGGCCTTGTCGCTGCCGATTGGCTCGAATCCGCATTCGGCCAAA CAGGGCCATTTTGGAGCCGTCATTATCGCTTCTTTCGCCAAGAGCGTGAACTAACAGTGATCCGAGAAGTTTTCAGCCCT GAGCTCGAGAAATGGCTCGGACCCACTCCACGACAAGAGCTTCAACTCTGTTCATGA
Upstream 100 bases:
>100_bases AAGGTCAGCAACGTCAGCTCAACATTGGAGGCGCCTTCTGAACCAGACACCCTCAGGACTGATCTCACCAGCACGGGTCT GGGACGCCCCTAGCAAGGCA
Downstream 100 bases:
>100_bases CCAGAGCTCTCGATTTGTCGATTTTTAACTTGACAACTTGCCAACTCTTGTGCTTTCGGGAAGATTATTCAAGCGGTTCC CCTCTCCATGGCACCCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLSGEGPWQLPGPWRLMLLGDGSPTRHLRLLTGHEVQVNLIAMQPEPNPDATAPQEVRELKPPLLRRQVWLICDSHTLAW AESWWNFDEAEKHLHNRNQPIWDSLTKGRSELFREVDGLGLVAADWLESAFGQTGPFWSRHYRFFRQERELTVIREVFSP ELEKWLGPTPRQELQLCS
Sequences:
>Translated_178_residues MLSGEGPWQLPGPWRLMLLGDGSPTRHLRLLTGHEVQVNLIAMQPEPNPDATAPQEVRELKPPLLRRQVWLICDSHTLAW AESWWNFDEAEKHLHNRNQPIWDSLTKGRSELFREVDGLGLVAADWLESAFGQTGPFWSRHYRFFRQERELTVIREVFSP ELEKWLGPTPRQELQLCS >Mature_178_residues MLSGEGPWQLPGPWRLMLLGDGSPTRHLRLLTGHEVQVNLIAMQPEPNPDATAPQEVRELKPPLLRRQVWLICDSHTLAW AESWWNFDEAEKHLHNRNQPIWDSLTKGRSELFREVDGLGLVAADWLESAFGQTGPFWSRHYRFFRQERELTVIREVFSP ELEKWLGPTPRQELQLCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20740; Mature: 20740
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGEGPWQLPGPWRLMLLGDGSPTRHLRLLTGHEVQVNLIAMQPEPNPDATAPQEVREL CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCHHHHHHC KPPLLRRQVWLICDSHTLAWAESWWNFDEAEKHLHNRNQPIWDSLTKGRSELFREVDGLG CCHHHHHEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC LVAADWLESAFGQTGPFWSRHYRFFRQERELTVIREVFSPELEKWLGPTPRQELQLCS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MLSGEGPWQLPGPWRLMLLGDGSPTRHLRLLTGHEVQVNLIAMQPEPNPDATAPQEVREL CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCHHHHHHC KPPLLRRQVWLICDSHTLAWAESWWNFDEAEKHLHNRNQPIWDSLTKGRSELFREVDGLG CCHHHHHEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC LVAADWLESAFGQTGPFWSRHYRFFRQERELTVIREVFSPELEKWLGPTPRQELQLCS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA