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The map label for this gene is 33864423

Identifier: 33864423

GI number: 33864423

Start: 2282888

End: 2283697

Strand: Direct

Name: 33864423

Synonym: PMT2159

Alternate gene names: NA

Gene position: 2282888-2283697 (Clockwise)

Preceding gene: 33864422

Following gene: 33864424

Centisome position: 94.69

GC content: 56.91

Gene sequence:

>810_bases
ATGGAATTGATTAATTCCTACCGCTTCAAAAAGCGACTTGAGCGTGCCTGGACCTACGCCAGAGAAGGCAATGTCACCTC
AATACGCTTCGAGGGTCGCCGAGTACACGCCCGCGTCCAGGGCACCGGTGAAGACCCCTACAAGGTGAAACTCTGGCTTG
ATGTCCTCAACGACGAAGACTGGGGGTATGTACTTGAAGCCCTTACCCAGAAAGCGCGCTGGTCTGCCCAGTTGCTAGCA
GGGATCATGCCGGCAGACATCGAGCGGGCATTTGCAGCCAGTGGTCGACGTCTTTTTCCCTTCAAGCTGCAGGAAGTCCG
CAGTGAATGCAGCTGCCCAGATAAAGCCAATCCCTGCAAACACATCAGCGCCATCTATTTCCTGATGGGGGATCGCTTCA
GCGAAGATCCCTTTGTACTGTTTCAGCTACGCGGTCGCACCCGCAACAAATTGCTTGCGGATCTAGCCGAACAACGGCGC
GATGCACTCGCAAAACTGGCAGAAACAGCTGCCGCAAAGAATGAGGTTCCTGCTGAGCCATCCAGCAGCGACGACCTGCC
TGTACCACCCCATCCCGCCGTTGTGGACCCGAGCTTATGGTGGCGCTACGACTCCAGCCTCGATGCCGATCTGGTGGTGA
TTACTCCAGCCCTGGAAGGCGACACAGGGCTCGATGCAGCAGGAGATCTACCCCTGGCCGAAGAACCCCGCTTCCCAAAA
GCCCGTCAGACTTTTCTGAATCATCTCAGGGAGCAGGGACAAGCCCTATCCCAGCAAGCCATGCTTCAGGCAATGGCGAC
CGGTGGCTGA

Upstream 100 bases:

>100_bases
CAAAGATGACGTCATGACAAGCAGCACCAACAACACCAGCATCACAACCGCCCTAGGGGAAGAGGGGCTAGGGCAACAGC
CTTGGTGGGTGGAGCAATGG

Downstream 100 bases:

>100_bases
AGCCCCCTGGCTATCTTCTGAGAAGCAGGAGCTAGTCAACCTGCTTTTAATCTCTCACCAACAAGCTTTCAATTACCCAC
TTCTGGCATGTGAGCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain Protein; SWIM Zinc Finger Domain-Containing Protein; Zinc Finger SWIM-Type; SWIM Zinc Finger Domain Protein; Zinc Finger Protein; Swim Zinc Finger Domain Protein; Non-Specific Serine/Threonine Protein Kinase; SNF2 Family Helicase; Helicase SNF2 Family; Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Containing Protein; Zinc Finger Swim Domain-Containing Protein; Helicase; SNF2-Related Protein; SWIM Zinc-Finger Protein; Swim Zn-Finger Containing Protein; Snf2 Family Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MELINSYRFKKRLERAWTYAREGNVTSIRFEGRRVHARVQGTGEDPYKVKLWLDVLNDEDWGYVLEALTQKARWSAQLLA
GIMPADIERAFAASGRRLFPFKLQEVRSECSCPDKANPCKHISAIYFLMGDRFSEDPFVLFQLRGRTRNKLLADLAEQRR
DALAKLAETAAAKNEVPAEPSSSDDLPVPPHPAVVDPSLWWRYDSSLDADLVVITPALEGDTGLDAAGDLPLAEEPRFPK
ARQTFLNHLREQGQALSQQAMLQAMATGG

Sequences:

>Translated_269_residues
MELINSYRFKKRLERAWTYAREGNVTSIRFEGRRVHARVQGTGEDPYKVKLWLDVLNDEDWGYVLEALTQKARWSAQLLA
GIMPADIERAFAASGRRLFPFKLQEVRSECSCPDKANPCKHISAIYFLMGDRFSEDPFVLFQLRGRTRNKLLADLAEQRR
DALAKLAETAAAKNEVPAEPSSSDDLPVPPHPAVVDPSLWWRYDSSLDADLVVITPALEGDTGLDAAGDLPLAEEPRFPK
ARQTFLNHLREQGQALSQQAMLQAMATGG
>Mature_269_residues
MELINSYRFKKRLERAWTYAREGNVTSIRFEGRRVHARVQGTGEDPYKVKLWLDVLNDEDWGYVLEALTQKARWSAQLLA
GIMPADIERAFAASGRRLFPFKLQEVRSECSCPDKANPCKHISAIYFLMGDRFSEDPFVLFQLRGRTRNKLLADLAEQRR
DALAKLAETAAAKNEVPAEPSSSDDLPVPPHPAVVDPSLWWRYDSSLDADLVVITPALEGDTGLDAAGDLPLAEEPRFPK
ARQTFLNHLREQGQALSQQAMLQAMATGG

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30212; Mature: 30212

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELINSYRFKKRLERAWTYAREGNVTSIRFEGRRVHARVQGTGEDPYKVKLWLDVLNDED
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCEEEEEEEEECCCCC
WGYVLEALTQKARWSAQLLAGIMPADIERAFAASGRRLFPFKLQEVRSECSCPDKANPCK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCHHHHHHHHHCCCCCCCCHHH
HISAIYFLMGDRFSEDPFVLFQLRGRTRNKLLADLAEQRRDALAKLAETAAAKNEVPAEP
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SSSDDLPVPPHPAVVDPSLWWRYDSSLDADLVVITPALEGDTGLDAAGDLPLAEEPRFPK
CCCCCCCCCCCCCEECCHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
ARQTFLNHLREQGQALSQQAMLQAMATGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELINSYRFKKRLERAWTYAREGNVTSIRFEGRRVHARVQGTGEDPYKVKLWLDVLNDED
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCEEEEEEEEECCCCC
WGYVLEALTQKARWSAQLLAGIMPADIERAFAASGRRLFPFKLQEVRSECSCPDKANPCK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCHHHHHHHHHCCCCCCCCHHH
HISAIYFLMGDRFSEDPFVLFQLRGRTRNKLLADLAEQRRDALAKLAETAAAKNEVPAEP
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SSSDDLPVPPHPAVVDPSLWWRYDSSLDADLVVITPALEGDTGLDAAGDLPLAEEPRFPK
CCCCCCCCCCCCCEECCHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
ARQTFLNHLREQGQALSQQAMLQAMATGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA