Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864418

Identifier: 33864418

GI number: 33864418

Start: 2274537

End: 2275103

Strand: Direct

Name: 33864418

Synonym: PMT2154

Alternate gene names: NA

Gene position: 2274537-2275103 (Clockwise)

Preceding gene: 33864417

Following gene: 33864419

Centisome position: 94.34

GC content: 48.85

Gene sequence:

>567_bases
ATGTGGGGACAAGAGCCTCAACTTCAGCGAGTCCGCGAGCGACTGAAGTTACTGCTGTCGACCCACGCCAATGCACTCCA
TCCCAAAACCTTGTATGCCAAGCCAGGAGAGCTGCTCCTCAAGCAAGACGCGCCAGCCAAGCACCTGCTTCTACTGACTC
AAGGAAAGGTGGCGATTGAGATCCAACAACAAGGTCAATCTCCTCACACGCTGACAGTGATAGAAGCCGAAGCATTATTG
GGGGAGATGGGCCTATTCGGCGATGGCACCCACTCTGCTGATGTCCGGGTGGTTGATGGACCTGCGGAACTACTCCAAAT
CAACGGTAACGATCTACTCAAAGCACTGATCTATGACTCCGAACTGCTGATCGAACTGCTTGCTCTGATGAGTGAGCGTG
TCCGCAATACCAATAAGATAATCACATTGCTACTTGATGGAATTAACGGAGCCTGCAAAAGAGATGATATCTTGTTGGAC
AAAGCACTCCAAGACTTAAAAAGTCTGAACCAGTTCGTTTCACAAACTGCCGAACAACTGAAACACCACTATAGGAAAAA
TGAATAA

Upstream 100 bases:

>100_bases
TAAAGGTAAAAAAAGTTTCCCCCCATCAAGCAACCGTTTGCATTGGTTCTGCACGATGTTGCCAGTCATACCAAGATAAT
GAAAGCCATCCACAGCAGCC

Downstream 100 bases:

>100_bases
CCAAAGAAATCAGTCATTAACAAATGGCATCTTGTTCATAATGGCTTTCAAGTATTAATAGAGCAGCTCGTCAGGTCTAC
TCAAAATCAACCAAAGAGAA

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIEIQQQGQSPHTLTVIEAEALL
GEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDSELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLD
KALQDLKSLNQFVSQTAEQLKHHYRKNE

Sequences:

>Translated_188_residues
MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIEIQQQGQSPHTLTVIEAEALL
GEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDSELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLD
KALQDLKSLNQFVSQTAEQLKHHYRKNE
>Mature_188_residues
MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIEIQQQGQSPHTLTVIEAEALL
GEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDSELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLD
KALQDLKSLNQFVSQTAEQLKHHYRKNE

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20977; Mature: 20977

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCCEEEEEECCCEEEE
IQQQGQSPHTLTVIEAEALLGEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDS
EECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEECHHHEEEECCHHHHHHHHHCH
ELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLDKALQDLKSLNQFVSQTAEQL
HHHHHHHHHHHHHHCCHHHEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KHHYRKNE
HHHHCCCC
>Mature Secondary Structure
MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCCEEEEEECCCEEEE
IQQQGQSPHTLTVIEAEALLGEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDS
EECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEECHHHEEEECCHHHHHHHHHCH
ELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLDKALQDLKSLNQFVSQTAEQL
HHHHHHHHHHHHHHCCHHHEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KHHYRKNE
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA