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The map label for this gene is yggB [C]

Identifier: 33864413

GI number: 33864413

Start: 2265509

End: 2266999

Strand: Direct

Name: yggB [C]

Synonym: PMT2149

Alternate gene names: 33864413

Gene position: 2265509-2266999 (Clockwise)

Preceding gene: 33864409

Following gene: 33864414

Centisome position: 93.97

GC content: 52.25

Gene sequence:

>1491_bases
ATGACGTTTGGCCTGCGCCTAATCACCACGATTTTGATCACCCTGCTGTTAACGGTTAGCCATCAACGCAACCTGCTTAG
CTCACGCTGGCCAAAACCACCGGTTCGCCTACCCGTGCTGGCATTACTGCTCTGGGTAGGGACTGCGCTGCCGTTCTTAG
AAAAGATCATCTCCAAGCAGGCCAGCCTCACCACAATCGGACAACTAGCACTGCTCTACGCAACACTCAGTCTGGGGGGA
TGGTTGCTCCTGGAGATTCCAGGTGCACTGGGCTGGTGGCATCCACCCGCCAAAATTCTGCGCCAACTGAGCGGACTCAT
CCTGGCAGCCATCCTGACATTAATCATCCTGCAGCAGGCAGGGGTCAATCTCGCTGGCTTGATCACGACATCTGCCTTGC
TCACAGGCGTCGTCGCCTTCGCCGCACAAGAACCACTTAAAGACATTTTCGGAGGGCTGAGTCTTCAATTAGATCAACCG
TTTAAAGAAGGCGATTGGATCCAAATAGGAGAGGACTGCGGTCAAGTCATCATGCTGACCCTAATGAACACCTATCTACG
CACTGGTATGGATGGGTGCACCCTGATTATCCCAAACGACACGGTTGCTCAAGCGACGATCCGACGAGTCCACCTAGGCA
CTCCCTATGGCAATTGTTTTGAAGTTGGCCTGGATTACGGCTTCCCTCCATCACAAGCTCTCAGCCTGCTGCTGGGTGTA
GTCAATCGCCACGCTTCTGTACTGACCAAACCAGCCCCAAAAGCATGGGTAGCCAGCTTCGAAGACAGTTACATCTGCTA
TGGCATCCAGGTGTGGCATAAAGATATCAGTGACGTCAAACGGTTGAGCATCCGTGGTGAACTGATGGAACAAATTTGGT
ATGCCCTCGAGCGAATCGGTCAAAGCATTCCATTCCGAGTCCGTTTAGGGAGCCCCAAACCACAGACCTTGGCTGCAGAC
GATCCAATGTGCGCTGACACTCAACGCAAGGTCCAATGGCTCACTAGCAATGCACTTTTTACAGATCTAAGTCAAGCCCA
ACTTGATGCCCTAGCCCCATCAACACGCTGCGTACGCTTCGCAAAAGGGGAAACAATCATCCGGCAGGGTGAAAGCGGAG
ATTGCTTATACCAGATGATCACCGGCACGGTTGAGGTGTCGCAAACAAATTCACAAGGACAAAAAATAACCTTTCAAAAA
CTTGGCCAGCATGAGATCTTCGGCGAAATGGCACTGTGCACGAAACAACCTCGCAACTCCACAGTTCGCGCACTTGAAGA
ATCGGTACTCCTAGAAGTGGAGCGCCGAGACCTACAACCCCTGATCGATCAAGACCAGGGGTTGGTCGAGAAACTGGCCC
GATTGGTACATCTCCGCCAAATGGAAATCGGGTCACTAAATCAGCAGCAAAGTCATTCCAGCAAACTGCATAGCCAAAGA
AGGCTGATCCGCTCGATGCATAGGCTCTACAAGGTGATACGCGGCGACTAG

Upstream 100 bases:

>100_bases
ATCAGAATTCAATCACTTGAAGTTGCTTCAACATGCTGGGTCCATGGCATGACTGCCCAACCCATGCAATCAATTCTCCT
ACTACGAATGCCCAAATCTG

Downstream 100 bases:

>100_bases
CAGAATCTCAGTCAAGGGCAAGCCTTGGGCAGCATGACGCTGCTCTGATCAATGAGACAAATCCCATTTGCGATACCGCC
CCAAGAAACTCCGACTCTCT

Product: mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTFGLRLITTILITLLLTVSHQRNLLSSRWPKPPVRLPVLALLLWVGTALPFLEKIISKQASLTTIGQLALLYATLSLGG
WLLLEIPGALGWWHPPAKILRQLSGLILAAILTLIILQQAGVNLAGLITTSALLTGVVAFAAQEPLKDIFGGLSLQLDQP
FKEGDWIQIGEDCGQVIMLTLMNTYLRTGMDGCTLIIPNDTVAQATIRRVHLGTPYGNCFEVGLDYGFPPSQALSLLLGV
VNRHASVLTKPAPKAWVASFEDSYICYGIQVWHKDISDVKRLSIRGELMEQIWYALERIGQSIPFRVRLGSPKPQTLAAD
DPMCADTQRKVQWLTSNALFTDLSQAQLDALAPSTRCVRFAKGETIIRQGESGDCLYQMITGTVEVSQTNSQGQKITFQK
LGQHEIFGEMALCTKQPRNSTVRALEESVLLEVERRDLQPLIDQDQGLVEKLARLVHLRQMEIGSLNQQQSHSSKLHSQR
RLIRSMHRLYKVIRGD

Sequences:

>Translated_496_residues
MTFGLRLITTILITLLLTVSHQRNLLSSRWPKPPVRLPVLALLLWVGTALPFLEKIISKQASLTTIGQLALLYATLSLGG
WLLLEIPGALGWWHPPAKILRQLSGLILAAILTLIILQQAGVNLAGLITTSALLTGVVAFAAQEPLKDIFGGLSLQLDQP
FKEGDWIQIGEDCGQVIMLTLMNTYLRTGMDGCTLIIPNDTVAQATIRRVHLGTPYGNCFEVGLDYGFPPSQALSLLLGV
VNRHASVLTKPAPKAWVASFEDSYICYGIQVWHKDISDVKRLSIRGELMEQIWYALERIGQSIPFRVRLGSPKPQTLAAD
DPMCADTQRKVQWLTSNALFTDLSQAQLDALAPSTRCVRFAKGETIIRQGESGDCLYQMITGTVEVSQTNSQGQKITFQK
LGQHEIFGEMALCTKQPRNSTVRALEESVLLEVERRDLQPLIDQDQGLVEKLARLVHLRQMEIGSLNQQQSHSSKLHSQR
RLIRSMHRLYKVIRGD
>Mature_495_residues
TFGLRLITTILITLLLTVSHQRNLLSSRWPKPPVRLPVLALLLWVGTALPFLEKIISKQASLTTIGQLALLYATLSLGGW
LLLEIPGALGWWHPPAKILRQLSGLILAAILTLIILQQAGVNLAGLITTSALLTGVVAFAAQEPLKDIFGGLSLQLDQPF
KEGDWIQIGEDCGQVIMLTLMNTYLRTGMDGCTLIIPNDTVAQATIRRVHLGTPYGNCFEVGLDYGFPPSQALSLLLGVV
NRHASVLTKPAPKAWVASFEDSYICYGIQVWHKDISDVKRLSIRGELMEQIWYALERIGQSIPFRVRLGSPKPQTLAADD
PMCADTQRKVQWLTSNALFTDLSQAQLDALAPSTRCVRFAKGETIIRQGESGDCLYQMITGTVEVSQTNSQGQKITFQKL
GQHEIFGEMALCTKQPRNSTVRALEESVLLEVERRDLQPLIDQDQGLVEKLARLVHLRQMEIGSLNQQQSHSSKLHSQRR
LIRSMHRLYKVIRGD

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 55078; Mature: 54947

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFGLRLITTILITLLLTVSHQRNLLSSRWPKPPVRLPVLALLLWVGTALPFLEKIISKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ASLTTIGQLALLYATLSLGGWLLLEIPGALGWWHPPAKILRQLSGLILAAILTLIILQQA
CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVNLAGLITTSALLTGVVAFAAQEPLKDIFGGLSLQLDQPFKEGDWIQIGEDCGQVIMLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHH
LMNTYLRTGMDGCTLIIPNDTVAQATIRRVHLGTPYGNCFEVGLDYGFPPSQALSLLLGV
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHH
VNRHASVLTKPAPKAWVASFEDSYICYGIQVWHKDISDVKRLSIRGELMEQIWYALERIG
HHHHHHHHCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QSIPFRVRLGSPKPQTLAADDPMCADTQRKVQWLTSNALFTDLSQAQLDALAPSTRCVRF
CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEH
AKGETIIRQGESGDCLYQMITGTVEVSQTNSQGQKITFQKLGQHEIFGEMALCTKQPRNS
HCCCHHEECCCCCCHHHHHHHCEEEEECCCCCCCEEHHHHCCCHHHHHHHHHHCCCCCCH
TVRALEESVLLEVERRDLQPLIDQDQGLVEKLARLVHLRQMEIGSLNQQQSHSSKLHSQR
HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RLIRSMHRLYKVIRGD
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFGLRLITTILITLLLTVSHQRNLLSSRWPKPPVRLPVLALLLWVGTALPFLEKIISKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ASLTTIGQLALLYATLSLGGWLLLEIPGALGWWHPPAKILRQLSGLILAAILTLIILQQA
CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GVNLAGLITTSALLTGVVAFAAQEPLKDIFGGLSLQLDQPFKEGDWIQIGEDCGQVIMLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHH
LMNTYLRTGMDGCTLIIPNDTVAQATIRRVHLGTPYGNCFEVGLDYGFPPSQALSLLLGV
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHH
VNRHASVLTKPAPKAWVASFEDSYICYGIQVWHKDISDVKRLSIRGELMEQIWYALERIG
HHHHHHHHCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QSIPFRVRLGSPKPQTLAADDPMCADTQRKVQWLTSNALFTDLSQAQLDALAPSTRCVRF
CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEH
AKGETIIRQGESGDCLYQMITGTVEVSQTNSQGQKITFQKLGQHEIFGEMALCTKQPRNS
HCCCHHEECCCCCCHHHHHHHCEEEEECCCCCCCEEHHHHCCCHHHHHHHHHHCCCCCCH
TVRALEESVLLEVERRDLQPLIDQDQGLVEKLARLVHLRQMEIGSLNQQQSHSSKLHSQR
HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RLIRSMHRLYKVIRGD
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]