Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33864405

Identifier: 33864405

GI number: 33864405

Start: 2254282

End: 2255310

Strand: Direct

Name: 33864405

Synonym: PMT2141

Alternate gene names: NA

Gene position: 2254282-2255310 (Clockwise)

Preceding gene: 33864404

Following gene: 33864406

Centisome position: 93.5

GC content: 52.67

Gene sequence:

>1029_bases
ATGCACAATGAAATTGTGACTGGAAATGTCTTGCCATTTAACATCTTTGAAAAGGCAGATTCCAAGCTGCTGGCCTGGAT
TCGTGATGTCTCTGTCGTAAGGGAAATCACAACCTCCTGTCGTCTGATCGAAGAAGGCAGCACTCCGGACGGCTTGTTTG
TAGTTGAGTCAGGAGCAATCACGGTTTGCACCAAGCAAGCTGATGGTGGAAGCTTGTCACTCGCCAGCCTAAAAGTAGGC
AACCTGGTGGGAGAGATGAGCTGGCTGGAAGAACGTCCAGCAGTGGCAAGCATTGATGCTGGTCCAGGAAGTCGTCTGCT
CCAAATCCCTAGAGAGGCTCTGGAGTCAATCAATCAATCTGAGGCTTTCATTTGCCATCTCCTCTATCGCCTCATCGCTG
AAAAACTGGCCCTCCAAGTGCAAGGCCAAAACATATGGGTTCATCGTATTGCCGGGACTGACCAGGAACCCCTCCGCAAA
GTTCTGGTGCTATTCGCAGAACTCGAAGAGAAGGATGTGGCCTGGATCGCCAGGTCCGGTAAATTCAAACGTCTTGTCGC
TGGAGACGTTCTCCTTCAAGAGGGAGATAATGTGCCTGGCCTCTATCTGCTGCTCGCTGGAGAGGCCAGGATCAGTATCA
CTGAAAACGGAAGCTGGCAATCGGTAGGCAGCTCTCGACGCGGTGAACTACTCGGTGAGCTCACAATGCTCAACCCTCAA
GCAGCCGGAGCCACCGCCAATGTGGACACAGTCACAGGCCTAGAGCTACTGGTGCTCGACAAAGAGGAACTCAGCATGAC
CCTCAACGCAGATCCAAGGCTGGCTAAGCGTTTCTACAAAGGCATCGCACGCATGCTCTCCCAACGCAGCCGTGATCAAC
TCCTCAGCCGTGGATTTGCTGAAGCAAGCCGCATAGCCGAGGAACTCATCGACAACGAACAGCTTGGTCTTGATCAACTA
TCGGCCATCAGTTCAGCCGGGTTGCGTTTTGACTGGCTGTGCAGACAATTTCAGGACAAGGAGGGCTGA

Upstream 100 bases:

>100_bases
TACTTGCAGCATTGACTTGCCACAAAAAGAGCTGTGAGCTTGACAAAAGTTTAAGCAAAGTATCTGAATCTCACCTTCAG
GCAAAACAAGGTCCAATCAA

Downstream 100 bases:

>100_bases
TGTCTTGAAACTGCTACCCGGTGAAGAGCAACCATGGCCCTCTAACCCTTTGAAGGTTACTGAGGGAGAGATAAGACTGA
TCCTTGAGCAACGCTCTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAITVCTKQADGGSLSLASLKVG
NLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQSEAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRK
VLVLFAELEEKDVAWIARSGKFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ
AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFAEASRIAEELIDNEQLGLDQL
SAISSAGLRFDWLCRQFQDKEG

Sequences:

>Translated_342_residues
MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAITVCTKQADGGSLSLASLKVG
NLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQSEAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRK
VLVLFAELEEKDVAWIARSGKFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ
AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFAEASRIAEELIDNEQLGLDQL
SAISSAGLRFDWLCRQFQDKEG
>Mature_342_residues
MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAITVCTKQADGGSLSLASLKVG
NLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQSEAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRK
VLVLFAELEEKDVAWIARSGKFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ
AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFAEASRIAEELIDNEQLGLDQL
SAISSAGLRFDWLCRQFQDKEG

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37513; Mature: 37513

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAI
CCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCEE
TVCTKQADGGSLSLASLKVGNLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQS
EEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCH
EAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRKVLVLFAELEEKDVAWIARSG
HHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEEECCC
KFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ
CEEEHHHHHHHEECCCCCCEEEEEEECCEEEEEECCCCCHHCCCCHHHHHHHHHEEECCC
AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFA
CCCCCCCCCCCCCEEEEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
EASRIAEELIDNEQLGLDQLSAISSAGLRFDWLCRQFQDKEG
HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAI
CCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCEE
TVCTKQADGGSLSLASLKVGNLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQS
EEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCH
EAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRKVLVLFAELEEKDVAWIARSG
HHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEEECCC
KFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ
CEEEHHHHHHHEECCCCCCEEEEEEECCEEEEEECCCCCHHCCCCHHHHHHHHHEEECCC
AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFA
CCCCCCCCCCCCCEEEEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
EASRIAEELIDNEQLGLDQLSAISSAGLRFDWLCRQFQDKEG
HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA