Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864390

Identifier: 33864390

GI number: 33864390

Start: 2239027

End: 2240556

Strand: Direct

Name: 33864390

Synonym: PMT2126

Alternate gene names: NA

Gene position: 2239027-2240556 (Clockwise)

Preceding gene: 33864380

Following gene: 33864391

Centisome position: 92.87

GC content: 50.46

Gene sequence:

>1530_bases
ATGGTGCTAACAAAGGCAAAGAGCTCCTTGCAGCTCAGCCTTTGTCATGACACTGCTGACAACGCGCTAACAAGCGCCTC
CTTTCATCCTCAAACAATGGCGGAGTCTTGGGCCCTAGATAAGAAGGCAATTCCTTCCGATCCAAACGCTTTTGTGTTTA
GGAATGGCAGTCGTGATGGTCGGTGGTACCTCTATTTCTACGAGCGTGAGTCAGGCGGTAGACATCTACGGGTCTTAAAA
GACGGCAATGGGACATATCCAAAACCAGATATCTCTGGTCAAGACGATGCCTGGATGCTCGGTGTCGCTACTTTCATTGA
TCTAAAAGCAAAAGCTGATCGCGGAGAAGCCATCCGTTCGATTTCATTCGCTGAGATGGCTCAACAGTTCCTAGCCAAAG
AACAAAAGAAGATCAGCTCTGTCCCACTCCAAGGGATTACAGCTGCTCGCTACAGGCTACTTGCCAATCAGATGCGCTGG
CTCAGGGACTACGTCGGAGATGACAAAAAGCCCATTCACAAGTTTCGGCGCTCGGCCTTTTTGAACTACGAGACATGGCG
CAAAGAACGAGCCATACAAATCGGCAAAAAGATCCCAGTGCAAACCACCATCCTCCAAGAGATGTCTACCCTTAAACGTG
CCTTTGAGGAAGTCGGCGTCGCCCATGGTTTTGTCACGCGAGAGAGCCTTCCTGAGATCCCACGCATCAAGCTGCCGAAA
GACCAAAAGCACCGCCGTGATGACTTCTCAGACAAAGAGTGGTTAGAGCTTGAAAAAAGCAGCCGGCTCTGGTGGAGCAA
AGGCTTGCAACGCACTTTCGATGAACAAGGTCAGCTACTCAAAGATTCCAGCGGCAAGTACATCACAACCGTCAGCGTTG
ATGGCCTTTCGCCCCGCTCTGCAGCACAGCTCATCCATCGGCAACTCATCTACTTCGCGATGCGCATCTCAATGGATAGC
GGCATCCGTCCTGGCTCCCTACGCAAGATCAAGTGGAAGCACATCTCAGAGAACACTGCTATCCCCAAAGCAGAAAGGAA
GACATGGATCATTGTTGAGGTACCGCCAGAGAACACCAAAACAGCGCGCTATTACCGCATCTCTGCTCCCATCGCTCGTC
ACCTTGAGGCCCTCAGAGATATCACCAGATTCAAAAAGCCCGACGACTTGCTTTTTGTCAATCAACGGACAGGGCAAGCC
TTTAGTGAACGCATCTGGAAAGACGCTTTCGCTGAGGCATTAGTAGAGGCACGACTCGCCGATTGGGCCGATGATGACAG
CAACAACCAAAGGCGCATCAACATCCACTCCGGCAAGAACCTCACCTGGTACAGCTTTCGACACACTCACATCAGCATGC
GTCTTAAAGCCGGTGTACCAGTTCCTGTGATTGCAGCTAACACCGACACCAGCATGAAATACATAGAAGACCATTACTTC
CACTACCGAGCCGATGAAGCAACAGATCTACTTAGCAAAGGCAGAAAGACAATTAAAGCTGCAGAAAATCACCTCCATTG
GATTGGTTAG

Upstream 100 bases:

>100_bases
AGTAGCTCTCAGGTTAGGTGGTGTAATCGGCGTTGATGCGCACCTAATAGTCACAACCTAGTTGTTGCAAGGGATTATAC
GTGATGCAACTTGCGCTAAC

Downstream 100 bases:

>100_bases
ATCAAACAATAAAACACGTATCACCAACACGAACTCATGGGTCAAAGCAAGCAAAATAAGTTCAATACAACATCAAAGTC
CAAGTCCTTCTTTCCCATCA

Product: Phage integrase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MVLTKAKSSLQLSLCHDTADNALTSASFHPQTMAESWALDKKAIPSDPNAFVFRNGSRDGRWYLYFYERESGGRHLRVLK
DGNGTYPKPDISGQDDAWMLGVATFIDLKAKADRGEAIRSISFAEMAQQFLAKEQKKISSVPLQGITAARYRLLANQMRW
LRDYVGDDKKPIHKFRRSAFLNYETWRKERAIQIGKKIPVQTTILQEMSTLKRAFEEVGVAHGFVTRESLPEIPRIKLPK
DQKHRRDDFSDKEWLELEKSSRLWWSKGLQRTFDEQGQLLKDSSGKYITTVSVDGLSPRSAAQLIHRQLIYFAMRISMDS
GIRPGSLRKIKWKHISENTAIPKAERKTWIIVEVPPENTKTARYYRISAPIARHLEALRDITRFKKPDDLLFVNQRTGQA
FSERIWKDAFAEALVEARLADWADDDSNNQRRINIHSGKNLTWYSFRHTHISMRLKAGVPVPVIAANTDTSMKYIEDHYF
HYRADEATDLLSKGRKTIKAAENHLHWIG

Sequences:

>Translated_509_residues
MVLTKAKSSLQLSLCHDTADNALTSASFHPQTMAESWALDKKAIPSDPNAFVFRNGSRDGRWYLYFYERESGGRHLRVLK
DGNGTYPKPDISGQDDAWMLGVATFIDLKAKADRGEAIRSISFAEMAQQFLAKEQKKISSVPLQGITAARYRLLANQMRW
LRDYVGDDKKPIHKFRRSAFLNYETWRKERAIQIGKKIPVQTTILQEMSTLKRAFEEVGVAHGFVTRESLPEIPRIKLPK
DQKHRRDDFSDKEWLELEKSSRLWWSKGLQRTFDEQGQLLKDSSGKYITTVSVDGLSPRSAAQLIHRQLIYFAMRISMDS
GIRPGSLRKIKWKHISENTAIPKAERKTWIIVEVPPENTKTARYYRISAPIARHLEALRDITRFKKPDDLLFVNQRTGQA
FSERIWKDAFAEALVEARLADWADDDSNNQRRINIHSGKNLTWYSFRHTHISMRLKAGVPVPVIAANTDTSMKYIEDHYF
HYRADEATDLLSKGRKTIKAAENHLHWIG
>Mature_509_residues
MVLTKAKSSLQLSLCHDTADNALTSASFHPQTMAESWALDKKAIPSDPNAFVFRNGSRDGRWYLYFYERESGGRHLRVLK
DGNGTYPKPDISGQDDAWMLGVATFIDLKAKADRGEAIRSISFAEMAQQFLAKEQKKISSVPLQGITAARYRLLANQMRW
LRDYVGDDKKPIHKFRRSAFLNYETWRKERAIQIGKKIPVQTTILQEMSTLKRAFEEVGVAHGFVTRESLPEIPRIKLPK
DQKHRRDDFSDKEWLELEKSSRLWWSKGLQRTFDEQGQLLKDSSGKYITTVSVDGLSPRSAAQLIHRQLIYFAMRISMDS
GIRPGSLRKIKWKHISENTAIPKAERKTWIIVEVPPENTKTARYYRISAPIARHLEALRDITRFKKPDDLLFVNQRTGQA
FSERIWKDAFAEALVEARLADWADDDSNNQRRINIHSGKNLTWYSFRHTHISMRLKAGVPVPVIAANTDTSMKYIEDHYF
HYRADEATDLLSKGRKTIKAAENHLHWIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58674; Mature: 58674

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTKAKSSLQLSLCHDTADNALTSASFHPQTMAESWALDKKAIPSDPNAFVFRNGSRDG
CEEECCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
RWYLYFYERESGGRHLRVLKDGNGTYPKPDISGQDDAWMLGVATFIDLKAKADRGEAIRS
EEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHH
ISFAEMAQQFLAKEQKKISSVPLQGITAARYRLLANQMRWLRDYVGDDKKPIHKFRRSAF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
LNYETWRKERAIQIGKKIPVQTTILQEMSTLKRAFEEVGVAHGFVTRESLPEIPRIKLPK
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
DQKHRRDDFSDKEWLELEKSSRLWWSKGLQRTFDEQGQLLKDSSGKYITTVSVDGLSPRS
CHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHH
AAQLIHRQLIYFAMRISMDSGIRPGSLRKIKWKHISENTAIPKAERKTWIIVEVPPENTK
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCC
TARYYRISAPIARHLEALRDITRFKKPDDLLFVNQRTGQAFSERIWKDAFAEALVEARLA
CEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
DWADDDSNNQRRINIHSGKNLTWYSFRHTHISMRLKAGVPVPVIAANTDTSMKYIEDHYF
HCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHE
HYRADEATDLLSKGRKTIKAAENHLHWIG
EEECCHHHHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVLTKAKSSLQLSLCHDTADNALTSASFHPQTMAESWALDKKAIPSDPNAFVFRNGSRDG
CEEECCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
RWYLYFYERESGGRHLRVLKDGNGTYPKPDISGQDDAWMLGVATFIDLKAKADRGEAIRS
EEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHH
ISFAEMAQQFLAKEQKKISSVPLQGITAARYRLLANQMRWLRDYVGDDKKPIHKFRRSAF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
LNYETWRKERAIQIGKKIPVQTTILQEMSTLKRAFEEVGVAHGFVTRESLPEIPRIKLPK
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
DQKHRRDDFSDKEWLELEKSSRLWWSKGLQRTFDEQGQLLKDSSGKYITTVSVDGLSPRS
CHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHH
AAQLIHRQLIYFAMRISMDSGIRPGSLRKIKWKHISENTAIPKAERKTWIIVEVPPENTK
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCC
TARYYRISAPIARHLEALRDITRFKKPDDLLFVNQRTGQAFSERIWKDAFAEALVEARLA
CEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
DWADDDSNNQRRINIHSGKNLTWYSFRHTHISMRLKAGVPVPVIAANTDTSMKYIEDHYF
HCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHE
HYRADEATDLLSKGRKTIKAAENHLHWIG
EEECCHHHHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA