| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864384
Identifier: 33864384
GI number: 33864384
Start: 2235230
End: 2235487
Strand: Reverse
Name: 33864384
Synonym: PMT2120
Alternate gene names: NA
Gene position: 2235487-2235230 (Counterclockwise)
Preceding gene: 33864385
Following gene: 33864383
Centisome position: 92.73
GC content: 50.0
Gene sequence:
>258_bases ATGTCAGAAGAACAACTGAAGGCATTCATCGCCAAAGTTCAGGCAGATAGCTCACTGCAGGAACAGCTCAAAGCAGAAGG TGCTGACCCTGTTTCTATTGCAAAGGCTGCTGGGTTCACGATTACCACAGAAGATCTAAACTCTCATCGCCAAAACCTGT CTGATGAGGAGCTAGAAGGGGCGGCTGGTGGGGCTGGTGGAACAATTCCTTCCCTTATGACTGGATGTGGATGGTTGACT GGGTTGTGTGTGAGGTGA
Upstream 100 bases:
>100_bases CAGGGGCTTTTTATTTCTTCAATGACTTCCATATTCGCTTAAAACGGCATCCAATACCTGGCACCTTAAACTTACAACCA ACAACTAATTTCTAAACCAA
Downstream 100 bases:
>100_bases CTACCTTTGGAGCAAGAGGTAAATGGCATCCGATACCTGGCACCTTAAACTTATAAACAAGAACTAATTTCTAATCCAAT GTCAGAAGAACAACTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSEEQLKAFIAKVQADSSLQEQLKAEGADPVSIAKAAGFTITTEDLNSHRQNLSDEELEGAAGGAGGTIPSLMTGCGWLT GLCVR
Sequences:
>Translated_85_residues MSEEQLKAFIAKVQADSSLQEQLKAEGADPVSIAKAAGFTITTEDLNSHRQNLSDEELEGAAGGAGGTIPSLMTGCGWLT GLCVR >Mature_84_residues SEEQLKAFIAKVQADSSLQEQLKAEGADPVSIAKAAGFTITTEDLNSHRQNLSDEELEGAAGGAGGTIPSLMTGCGWLTG LCVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8823; Mature: 8692
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEQLKAFIAKVQADSSLQEQLKAEGADPVSIAKAAGFTITTEDLNSHRQNLSDEELEG CCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCEEEHHHHHHHHCCCCCHHHCC AAGGAGGTIPSLMTGCGWLTGLCVR CCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEEQLKAFIAKVQADSSLQEQLKAEGADPVSIAKAAGFTITTEDLNSHRQNLSDEELEG CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCEEEHHHHHHHHCCCCCHHHCC AAGGAGGTIPSLMTGCGWLTGLCVR CCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA