| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864367
Identifier: 33864367
GI number: 33864367
Start: 2216735
End: 2217379
Strand: Reverse
Name: 33864367
Synonym: PMT2103
Alternate gene names: NA
Gene position: 2217379-2216735 (Counterclockwise)
Preceding gene: 33864368
Following gene: 33864365
Centisome position: 91.97
GC content: 47.6
Gene sequence:
>645_bases ATGAATGAACGCGTTGATGCCTATCAAGATCGTCTTCACTTTGCCGCGACAGAGAGGAACCGTGATGCAATTGCTGCTGT TCTGAGCAAGGCGCTGCCGAGCGATGGCAGAGTGTTGGAACTTGCAAGTGGCAGTGGCGAACATGCCGTTGCTTTTCAAA AACTGTTCCCAAAGCTCATTTGGCATACCAGCGACATTGATCCAATGCATCTTCGCAGCATCAATGCTTGGATCCATTTT GAGCAGCTTGAACAGACCATGCCCCCACCCCTCAAGATCGATGTTAAAGCGCGCCCCTGGCAACTTCCTGATGGATTAAC TGATCAGCTTTGCGGGGTTATTTGCATCAATATGATTCATATTTCTCCTTGGAATTGTTGTGAATCTTTAGTCCAAGAAG CTGCTCAATTACTGGGCAACTCTGCACCACTAATTCTCTATGGGCCATACAAGCGCAATGGTCTTCACACGAGTGAAAGT AATGCCAGATTTGATGATTATCTGCGCACGCAAGATCCAAGTTGGGGAGTGCGTGAACTCGAAGATGTAGAACGTCTTGG TGTCACTGTAGGCCTCTTGTTGAATGAGGTGATTGAAATGCCTGCCAACAACCTCTCCTTGATCTTCACGCCTAGGCAAT CATGA
Upstream 100 bases:
>100_bases CAATGCCGCTACGAGCCGAACCCTCATCAGCAGGAGAACTTTTCCCTCATCTTTTTGGAGCGCTGCCTTTGAGCGCTGTA GAACTTGTGGAAACTTATCC
Downstream 100 bases:
>100_bases CTGGATCACGCCAATCAAGACATCCCATCTCTACCGCTGACGGCAATGAAGAAGATTTACGCCAAACAAAACTCAAGGGA TCAGTTCGTCTTCATGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNERVDAYQDRLHFAATERNRDAIAAVLSKALPSDGRVLELASGSGEHAVAFQKLFPKLIWHTSDIDPMHLRSINAWIHF EQLEQTMPPPLKIDVKARPWQLPDGLTDQLCGVICINMIHISPWNCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSES NARFDDYLRTQDPSWGVRELEDVERLGVTVGLLLNEVIEMPANNLSLIFTPRQS
Sequences:
>Translated_214_residues MNERVDAYQDRLHFAATERNRDAIAAVLSKALPSDGRVLELASGSGEHAVAFQKLFPKLIWHTSDIDPMHLRSINAWIHF EQLEQTMPPPLKIDVKARPWQLPDGLTDQLCGVICINMIHISPWNCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSES NARFDDYLRTQDPSWGVRELEDVERLGVTVGLLLNEVIEMPANNLSLIFTPRQS >Mature_214_residues MNERVDAYQDRLHFAATERNRDAIAAVLSKALPSDGRVLELASGSGEHAVAFQKLFPKLIWHTSDIDPMHLRSINAWIHF EQLEQTMPPPLKIDVKARPWQLPDGLTDQLCGVICINMIHISPWNCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSES NARFDDYLRTQDPSWGVRELEDVERLGVTVGLLLNEVIEMPANNLSLIFTPRQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=199, Percent_Identity=44.7236180904523, Blast_Score=141, Evalue=5e-34, Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=43.4782608695652, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI93102401, Length=183, Percent_Identity=36.6120218579235, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71998087, Length=204, Percent_Identity=34.3137254901961, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI28574095, Length=202, Percent_Identity=32.1782178217822, Blast_Score=114, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24093; Mature: 24093
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERVDAYQDRLHFAATERNRDAIAAVLSKALPSDGRVLELASGSGEHAVAFQKLFPKLI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH WHTSDIDPMHLRSINAWIHFEQLEQTMPPPLKIDVKARPWQLPDGLTDQLCGVICINMIH HCCCCCCHHHHHHHHHHEEHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC ISPWNCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSESNARFDDYLRTQDPSWGVREL CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH EDVERLGVTVGLLLNEVIEMPANNLSLIFTPRQS HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC >Mature Secondary Structure MNERVDAYQDRLHFAATERNRDAIAAVLSKALPSDGRVLELASGSGEHAVAFQKLFPKLI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH WHTSDIDPMHLRSINAWIHFEQLEQTMPPPLKIDVKARPWQLPDGLTDQLCGVICINMIH HCCCCCCHHHHHHHHHHEEHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC ISPWNCCESLVQEAAQLLGNSAPLILYGPYKRNGLHTSESNARFDDYLRTQDPSWGVREL CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH EDVERLGVTVGLLLNEVIEMPANNLSLIFTPRQS HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA