| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864356
Identifier: 33864356
GI number: 33864356
Start: 2205106
End: 2205843
Strand: Reverse
Name: 33864356
Synonym: PMT2092
Alternate gene names: NA
Gene position: 2205843-2205106 (Counterclockwise)
Preceding gene: 33864363
Following gene: 33864347
Centisome position: 91.5
GC content: 50.81
Gene sequence:
>738_bases ATGTCGCGAACCTACCCCGAGCTGCTCATGGCATTGAGAAAGCCAGGCAACAGGCTGTTGGTTTTAGGTCTTGGTTTCTT CACTTTGCTGACGACCTTGCCAGCAATCTCCAAAACGATTTTCAACAGTCAGCCTCTCAACCAAGAACGTTTGGTCGTAT TGGCTCAGGCAGTGGGAGGAAATCGCTGGAAACTGCTCGTACTCGAACAAATCAAGCCTCTGCCACTGTGCTGGGAAACC CGTCCAGACGGATTGGTTAACCCAACCCTTAATAACTTCAACTTTGCAGGAATCTGCAATCGTTACTTAGACAGCAACGG CTATTCCTTGCGAAGTAGCGGCGAAGACGTGGCTCACAGCTTTCGGCTGCGCATCAAACAAAGCCGAGATCGTCTGGAAC TAAAAGCCCTCGATCCTGCGCGGTCGGTTCCAATTACCGTTGCCAGCGCAATACTTCCTCAACGCAATCGTGATGCGTTT GTGAAATTAAACTTGGAACCCGGCTGGAAGCTGGAGCGTCGCATATACCAAGGACGCAAACTCAGCCACGTCTACTTTGC TCATCCAGATCCTGTGAACCTGTTAATTGCCAAAGCATCAGCTCATCAAGGACCTTCCGCCTTCAAGCAACTAGGCGCTC CCAAGGCACCACTCCCTCCCCCAATTTCAATAGCCAAAAACAGCGTCATCCATGGTAAAGGCCCGATTCGACTCCTTGTG ATTCCTTATCGTCCCTGA
Upstream 100 bases:
>100_bases AGTGGCAGCAGCCACAACCCGTCCACGACCATCAGCCATTTGAGAAGTCTGTTGTTGTTTGGTACAACACGGTTCGCTTG GTTCTTAGTCATTAGACGCT
Downstream 100 bases:
>100_bases CGTAGGCCCACTGCAGAGAGGACAGTTGAAGTAGCGCCCCATAATACTAGTAACTCTAAAAATTGCCTCATATCATTAAC ATCGTGAGGGGTGCGAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSRTYPELLMALRKPGNRLLVLGLGFFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGGNRWKLLVLEQIKPLPLCWET RPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHSFRLRIKQSRDRLELKALDPARSVPITVASAILPQRNRDAF VKLNLEPGWKLERRIYQGRKLSHVYFAHPDPVNLLIAKASAHQGPSAFKQLGAPKAPLPPPISIAKNSVIHGKGPIRLLV IPYRP
Sequences:
>Translated_245_residues MSRTYPELLMALRKPGNRLLVLGLGFFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGGNRWKLLVLEQIKPLPLCWET RPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHSFRLRIKQSRDRLELKALDPARSVPITVASAILPQRNRDAF VKLNLEPGWKLERRIYQGRKLSHVYFAHPDPVNLLIAKASAHQGPSAFKQLGAPKAPLPPPISIAKNSVIHGKGPIRLLV IPYRP >Mature_244_residues SRTYPELLMALRKPGNRLLVLGLGFFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGGNRWKLLVLEQIKPLPLCWETR PDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHSFRLRIKQSRDRLELKALDPARSVPITVASAILPQRNRDAFV KLNLEPGWKLERRIYQGRKLSHVYFAHPDPVNLLIAKASAHQGPSAFKQLGAPKAPLPPPISIAKNSVIHGKGPIRLLVI PYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27343; Mature: 27212
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTYPELLMALRKPGNRLLVLGLGFFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGG CCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCC NRWKLLVLEQIKPLPLCWETRPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHS CCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHH FRLRIKQSRDRLELKALDPARSVPITVASAILPQRNRDAFVKLNLEPGWKLERRIYQGRK HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCC LSHVYFAHPDPVNLLIAKASAHQGPSAFKQLGAPKAPLPPPISIAKNSVIHGKGPIRLLV CCEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCEEEEE IPYRP EECCC >Mature Secondary Structure SRTYPELLMALRKPGNRLLVLGLGFFTLLTTLPAISKTIFNSQPLNQERLVVLAQAVGG CCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCC NRWKLLVLEQIKPLPLCWETRPDGLVNPTLNNFNFAGICNRYLDSNGYSLRSSGEDVAHS CCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHH FRLRIKQSRDRLELKALDPARSVPITVASAILPQRNRDAFVKLNLEPGWKLERRIYQGRK HHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCC LSHVYFAHPDPVNLLIAKASAHQGPSAFKQLGAPKAPLPPPISIAKNSVIHGKGPIRLLV CCEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCEEEEE IPYRP EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA