| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is pabA [H]
Identifier: 33864332
GI number: 33864332
Start: 2174276
End: 2174884
Strand: Direct
Name: pabA [H]
Synonym: PMT2067
Alternate gene names: 33864332
Gene position: 2174276-2174884 (Clockwise)
Preceding gene: 33864331
Following gene: 33864333
Centisome position: 90.19
GC content: 55.99
Gene sequence:
>609_bases ATGCTCCTAATTATCGACAACTACGACAGCTTCACCTTCAACCTGGTGCAGTATTTAGGGGAACTGGCCGCAAAGCATCC TGTCGCTGCTGATCTACGGGTTGAGCGCAACGATGCTCTCTGCCTCAGCCAAATCAGGGAGCTACACCCCGCCGCCATCC TGCTCTCACCTGGTCCGGGCAATCCTGATCAATCCGGAGTTTGCCTGGAGGTGCTGACCGAGCTGGCTCCCACAATCCCC ACCCTCGGGGTGTGCTTGGGGCATCAAGCCCTAGCTCAAGCCTACGGAGGCAAGGTGGTGCAAGCTGATGAACTGATGCA TGGCAAAACCTCGCCTGTGCTGCACAACGGCGAAGGGCTGTTTAAAGGCTTACCCCTACCACTCACTGCTACCAGATATC ACAGCCTGATTGCCGAGCGAGAGAGCCTGCCGGACTGCCTAGAAGTCACCGCATGGCTAGAGGACGGCACAATCATGGGC CTACGTCATCGAACACACCCCCATCTACAAGGAGTGCAGTTCCATCCCGAAAGTGTGCTCACAGAAGCAGGCCATCAACT GCTTACCAACTTTTTGCGTCTGACTGAAGCCAGCGAAAAGCACTGCTAA
Upstream 100 bases:
>100_bases CTGCTGTGATGGTTGCCGCCATTAGCTCTCTACTGATTGCCCTGCTGCTGCTGCTCCCTCCTCTACTGATCCGCCTTGGG CTCTGACGCCCTGCAGCCCC
Downstream 100 bases:
>100_bases CTTCCAAAACACTCCCGCTTCCACTCATGCCTTCCCTCTTCAAGGTTCTGAGCACCCGTAGCCTTTCTGCAGCTTCAGCT GTGGGTTTAGTACTGTCCTC
Product: para-aminobenzoate synthase component II
Products: NA
Alternate protein names: ADC synthase [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MLLIIDNYDSFTFNLVQYLGELAAKHPVAADLRVERNDALCLSQIRELHPAAILLSPGPGNPDQSGVCLEVLTELAPTIP TLGVCLGHQALAQAYGGKVVQADELMHGKTSPVLHNGEGLFKGLPLPLTATRYHSLIAERESLPDCLEVTAWLEDGTIMG LRHRTHPHLQGVQFHPESVLTEAGHQLLTNFLRLTEASEKHC
Sequences:
>Translated_202_residues MLLIIDNYDSFTFNLVQYLGELAAKHPVAADLRVERNDALCLSQIRELHPAAILLSPGPGNPDQSGVCLEVLTELAPTIP TLGVCLGHQALAQAYGGKVVQADELMHGKTSPVLHNGEGLFKGLPLPLTATRYHSLIAERESLPDCLEVTAWLEDGTIMG LRHRTHPHLQGVQFHPESVLTEAGHQLLTNFLRLTEASEKHC >Mature_202_residues MLLIIDNYDSFTFNLVQYLGELAAKHPVAADLRVERNDALCLSQIRELHPAAILLSPGPGNPDQSGVCLEVLTELAPTIP TLGVCLGHQALAQAYGGKVVQADELMHGKTSPVLHNGEGLFKGLPLPLTATRYHSLIAERESLPDCLEVTAWLEDGTIMG LRHRTHPHLQGVQFHPESVLTEAGHQLLTNFLRLTEASEKHC
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=192, Percent_Identity=60.9375, Blast_Score=241, Evalue=2e-65, Organism=Escherichia coli, GI1787517, Length=196, Percent_Identity=39.2857142857143, Blast_Score=136, Evalue=8e-34, Organism=Escherichia coli, GI1786215, Length=179, Percent_Identity=30.7262569832402, Blast_Score=65, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322638, Length=195, Percent_Identity=45.1282051282051, Blast_Score=187, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6324361, Length=212, Percent_Identity=33.0188679245283, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI45555749, Length=132, Percent_Identity=34.0909090909091, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24642586, Length=132, Percent_Identity=34.0909090909091, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 22045; Mature: 22045
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIIDNYDSFTFNLVQYLGELAAKHPVAADLRVERNDALCLSQIRELHPAAILLSPGPG CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCEEEEECCCCC NPDQSGVCLEVLTELAPTIPTLGVCLGHQALAQAYGGKVVQADELMHGKTSPVLHNGEGL CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCEECCCCH FKGLPLPLTATRYHSLIAERESLPDCLEVTAWLEDGTIMGLRHRTHPHLQGVQFHPESVL HCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECHHHHH TEAGHQLLTNFLRLTEASEKHC HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLIIDNYDSFTFNLVQYLGELAAKHPVAADLRVERNDALCLSQIRELHPAAILLSPGPG CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCEEEEECCCCC NPDQSGVCLEVLTELAPTIPTLGVCLGHQALAQAYGGKVVQADELMHGKTSPVLHNGEGL CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCEECCCCH FKGLPLPLTATRYHSLIAERESLPDCLEVTAWLEDGTIMGLRHRTHPHLQGVQFHPESVL HCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECHHHHH TEAGHQLLTNFLRLTEASEKHC HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6350604; 2403545; 9278503; 2546924; 8096767 [H]