| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is menA [H]
Identifier: 33864324
GI number: 33864324
Start: 2168169
End: 2169143
Strand: Reverse
Name: menA [H]
Synonym: PMT2059
Alternate gene names: 33864324
Gene position: 2169143-2168169 (Counterclockwise)
Preceding gene: 33864326
Following gene: 33864323
Centisome position: 89.97
GC content: 57.64
Gene sequence:
>975_bases ATGCCAGACCAGCAGGATGTTGCATCCCTTTACGCCAAGGCCTCTACAAGGCGAGCTCTTTGGAAAGCCGCGATCAAGTG GCCGATGTACTCCGTGGCAGTGATGCCGGCGTTGCTGGCGGCTGGTTGGCGGGTGGGGGCCGGCGAAGCAGTGCGTCTTG ATCAACTGCTTGGCTTTTTGGTTGCTGCTGTGCTGCTTTTGCTTTGGGAAAACCTCAGCAACGACCTCTTTGATGCAGAT ACCGGCGTGGACAGCTTCACCAAGTTGCATTCGGTGGTTGCGCTGCTGGGTCAGCGGAGACCTGTGCGCCGCTTTGCTCA CTTAGCGCTCGTGCTGGGCTTGTTGTTGATGTTGCTGTTGGCTTTGCGCAGTAGTGCTGCTGTGCTCTTTTTGGTGCTGG TGAGTTGTGGTTTGGGATATCTCTACCAGGGGCCGCCCTTTCGCTGGGGCTACATAGGCCTCGGTGAGCCGCTGTGTTGG TTGGCTTTTGGCCCTTTCGCTACTGCCGCTGCCTTGTTGGCGTTAGCACCGCTCAACGGTGATGGATCAGTGATTCCATG GGCAACGGCGTTCACCCTGGGGAGTGGTCCGGCCTTAGCGACAACCTTGGTGCTCTTTTGCTCTCATTTTCATCAAGTCG CTGAGGATGCGGCTTTTGGCAAACGATCGCCTGTGGTGCGCTTGGGCACAGCTCGTGCGGCGGCTTTGGTGCCCTGGATT CTTTCGCTTGTGTTTGCTCTGGAGTGGATCCCTGTGCTGCAGGGAGATTGGCCGCTGACAGCTCTGCTTGGTGGTTTGGG ATTGCCTGCAGGAGCAGCGCTGGTCCGTTTGCTTCGCCATCACCATGATCAGCCAGAGAAGATTCGTGGCAGCAAGTTTT TGGCATTGCGCTTTCAGGCGCTCAATGGCTTGGGGTTGAGCTTGGGCCTAGCGCTAGCGCCTTGCTTGGGCTTTGCGCTA TCTAGCGCAGGTTGA
Upstream 100 bases:
>100_bases AGGTTGCTGAAACTACGGTCAGCTTTCATCCGGGATCGGAGTTGAGCGCGGGTCCTGCTCAAATGTATGGGCCTTTCCCT GGTTTCCAGGCTTCTTTCCC
Downstream 100 bases:
>100_bases GTTGATGGCTCTCAAGTTTCAGTGCAAACCGTTTTCATTTCGTTTGAGTCGGGTGTTGCAGACGGCTCAGGGGGTTGTTG AAGAACGTCAGGGTTGGTTG
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPDQQDVASLYAKASTRRALWKAAIKWPMYSVAVMPALLAAGWRVGAGEAVRLDQLLGFLVAAVLLLLWENLSNDLFDAD TGVDSFTKLHSVVALLGQRRPVRRFAHLALVLGLLLMLLLALRSSAAVLFLVLVSCGLGYLYQGPPFRWGYIGLGEPLCW LAFGPFATAAALLALAPLNGDGSVIPWATAFTLGSGPALATTLVLFCSHFHQVAEDAAFGKRSPVVRLGTARAAALVPWI LSLVFALEWIPVLQGDWPLTALLGGLGLPAGAALVRLLRHHHDQPEKIRGSKFLALRFQALNGLGLSLGLALAPCLGFAL SSAG
Sequences:
>Translated_324_residues MPDQQDVASLYAKASTRRALWKAAIKWPMYSVAVMPALLAAGWRVGAGEAVRLDQLLGFLVAAVLLLLWENLSNDLFDAD TGVDSFTKLHSVVALLGQRRPVRRFAHLALVLGLLLMLLLALRSSAAVLFLVLVSCGLGYLYQGPPFRWGYIGLGEPLCW LAFGPFATAAALLALAPLNGDGSVIPWATAFTLGSGPALATTLVLFCSHFHQVAEDAAFGKRSPVVRLGTARAAALVPWI LSLVFALEWIPVLQGDWPLTALLGGLGLPAGAALVRLLRHHHDQPEKIRGSKFLALRFQALNGLGLSLGLALAPCLGFAL SSAG >Mature_323_residues PDQQDVASLYAKASTRRALWKAAIKWPMYSVAVMPALLAAGWRVGAGEAVRLDQLLGFLVAAVLLLLWENLSNDLFDADT GVDSFTKLHSVVALLGQRRPVRRFAHLALVLGLLLMLLLALRSSAAVLFLVLVSCGLGYLYQGPPFRWGYIGLGEPLCWL AFGPFATAAALLALAPLNGDGSVIPWATAFTLGSGPALATTLVLFCSHFHQVAEDAAFGKRSPVVRLGTARAAALVPWIL SLVFALEWIPVLQGDWPLTALLGGLGLPAGAALVRLLRHHHDQPEKIRGSKFLALRFQALNGLGLSLGLALAPCLGFALS SAG
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011937 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 34440; Mature: 34309
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQQDVASLYAKASTRRALWKAAIKWPMYSVAVMPALLAAGWRVGAGEAVRLDQLLGFL CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VAAVLLLLWENLSNDLFDADTGVDSFTKLHSVVALLGQRRPVRRFAHLALVLGLLLMLLL HHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALRSSAAVLFLVLVSCGLGYLYQGPPFRWGYIGLGEPLCWLAFGPFATAAALLALAPLNG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DGSVIPWATAFTLGSGPALATTLVLFCSHFHQVAEDAAFGKRSPVVRLGTARAAALVPWI CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHH LSLVFALEWIPVLQGDWPLTALLGGLGLPAGAALVRLLRHHHDQPEKIRGSKFLALRFQA HHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH LNGLGLSLGLALAPCLGFALSSAG HCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDQQDVASLYAKASTRRALWKAAIKWPMYSVAVMPALLAAGWRVGAGEAVRLDQLLGFL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VAAVLLLLWENLSNDLFDADTGVDSFTKLHSVVALLGQRRPVRRFAHLALVLGLLLMLLL HHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALRSSAAVLFLVLVSCGLGYLYQGPPFRWGYIGLGEPLCWLAFGPFATAAALLALAPLNG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DGSVIPWATAFTLGSGPALATTLVLFCSHFHQVAEDAAFGKRSPVVRLGTARAAALVPWI CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHH LSLVFALEWIPVLQGDWPLTALLGGLGLPAGAALVRLLRHHHDQPEKIRGSKFLALRFQA HHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH LNGLGLSLGLALAPCLGFALSSAG HCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]