| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864319
Identifier: 33864319
GI number: 33864319
Start: 2163794
End: 2164822
Strand: Reverse
Name: 33864319
Synonym: PMT2054
Alternate gene names: NA
Gene position: 2164822-2163794 (Counterclockwise)
Preceding gene: 33864321
Following gene: 33864317
Centisome position: 89.79
GC content: 43.15
Gene sequence:
>1029_bases ATGAGATGTAACAAATACTGCAAAGAAAGGCTCATAAGGCTAAAACCTGCAAAGAACACAATTCTGCAAATGTCGATCTC GACTGATACCACTCAAGCAACAGCAATTTTGCCGAAGCTTTCACTGACTAATTTTGGCTTCCCTTGGTATAATGTTGGCG AGAAGACCTTTGAAGACTATTGCAATAACCTGCTAAATTTCGTGAACAATAGCAAGATCAAGACCTCCTATTTTCATATC AACGATTATACGGATGACGCAGCTGGTAATGGAACGTATAACTATTTAAACCCAAACCCGCCTTCGGGCATGAGAAAAGA TAAAGGGACAGGCGAGATCACTCCTTGGATTGTTACTTATTGGTTGGATAAGCTGCCTAGTGAGGTTGAAGCTGGTGTTG TAACCACTGTGAATCCTACGGATCCCTGGAAAAGCGATCCAAGCAATACAGCTGGTAATGCAAGTATTGGCGATGGAACA GCTGGTCATCCGAAGGATAATATGCGCCAAAGTTTTGAACTCATCCAAGCAATCAACAATGCTGCCGGTGCAAAGAAGAT TACTAATATGGAATTTGATCATGAGGGTGGTGGTGCCTATCAAGATGCCACGCCATATGGGGGAGTGAATGGCCAGCCAG TTGGAATTGGCTACACGAAGTGGCTATGGAATCGATATATGCCAGAAAGTGTAAGATTCACTGATCAAGACGCAAGTCAA CAAGGGTTTGCAGGCCATTATAGCTATGGCTTTGTTAATTATCGAACCGAAGCTTGGGCTGAGTCAAGCGGTGGGTCTAT AGAAGCCTTTGCAGAAAATTACTGGTTTGGTGAGTTGGAATATGAGCCAAATGAGTTTGACTTTGCGATGGAGTTTAGCG TCGATAGAGATACTCGCTTGCATCAATTCTTGTCTACAGAAACTATGACTGAAGCTCTCGGTGAGAACCCCGGAAAGATC ATTCAAGGGAATATTGATAATGATTATCCGAATGGCCAAATCAAGGGTGCAGGAACAAGCTTGAATTAG
Upstream 100 bases:
>100_bases TTGGTCTTGAATCTGCTAATAAGAACTCATGCGAATTTAGGTCTTACTTGATCATTCCAAAACTTTTAATCATAGAGGTA GTCCTGAAGAGTATTGATGA
Downstream 100 bases:
>100_bases TTTGCAATTCCTGATCTTGATAATAAGTCAGTGCATGTTTTAGCGCCTCATAATGTGGATACACCGTATCGTTATTTTCG CGAGTTCCCAGAGCTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRCNKYCKERLIRLKPAKNTILQMSISTDTTQATAILPKLSLTNFGFPWYNVGEKTFEDYCNNLLNFVNNSKIKTSYFHI NDYTDDAAGNGTYNYLNPNPPSGMRKDKGTGEITPWIVTYWLDKLPSEVEAGVVTTVNPTDPWKSDPSNTAGNASIGDGT AGHPKDNMRQSFELIQAINNAAGAKKITNMEFDHEGGGAYQDATPYGGVNGQPVGIGYTKWLWNRYMPESVRFTDQDASQ QGFAGHYSYGFVNYRTEAWAESSGGSIEAFAENYWFGELEYEPNEFDFAMEFSVDRDTRLHQFLSTETMTEALGENPGKI IQGNIDNDYPNGQIKGAGTSLN
Sequences:
>Translated_342_residues MRCNKYCKERLIRLKPAKNTILQMSISTDTTQATAILPKLSLTNFGFPWYNVGEKTFEDYCNNLLNFVNNSKIKTSYFHI NDYTDDAAGNGTYNYLNPNPPSGMRKDKGTGEITPWIVTYWLDKLPSEVEAGVVTTVNPTDPWKSDPSNTAGNASIGDGT AGHPKDNMRQSFELIQAINNAAGAKKITNMEFDHEGGGAYQDATPYGGVNGQPVGIGYTKWLWNRYMPESVRFTDQDASQ QGFAGHYSYGFVNYRTEAWAESSGGSIEAFAENYWFGELEYEPNEFDFAMEFSVDRDTRLHQFLSTETMTEALGENPGKI IQGNIDNDYPNGQIKGAGTSLN >Mature_342_residues MRCNKYCKERLIRLKPAKNTILQMSISTDTTQATAILPKLSLTNFGFPWYNVGEKTFEDYCNNLLNFVNNSKIKTSYFHI NDYTDDAAGNGTYNYLNPNPPSGMRKDKGTGEITPWIVTYWLDKLPSEVEAGVVTTVNPTDPWKSDPSNTAGNASIGDGT AGHPKDNMRQSFELIQAINNAAGAKKITNMEFDHEGGGAYQDATPYGGVNGQPVGIGYTKWLWNRYMPESVRFTDQDASQ QGFAGHYSYGFVNYRTEAWAESSGGSIEAFAENYWFGELEYEPNEFDFAMEFSVDRDTRLHQFLSTETMTEALGENPGKI IQGNIDNDYPNGQIKGAGTSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38103; Mature: 38103
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCNKYCKERLIRLKPAKNTILQMSISTDTTQATAILPKLSLTNFGFPWYNVGEKTFEDY CCCHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCHHHHHHH CNNLLNFVNNSKIKTSYFHINDYTDDAAGNGTYNYLNPNPPSGMRKDKGTGEITPWIVTY HHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH WLDKLPSEVEAGVVTTVNPTDPWKSDPSNTAGNASIGDGTAGHPKDNMRQSFELIQAINN HHHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AAGAKKITNMEFDHEGGGAYQDATPYGGVNGQPVGIGYTKWLWNRYMPESVRFTDQDASQ HCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCCEECCCCCCC QGFAGHYSYGFVNYRTEAWAESSGGSIEAFAENYWFGELEYEPNEFDFAMEFSVDRDTRL CCCCCEEEEEEEEECHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCHHHH HQFLSTETMTEALGENPGKIIQGNIDNDYPNGQIKGAGTSLN HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MRCNKYCKERLIRLKPAKNTILQMSISTDTTQATAILPKLSLTNFGFPWYNVGEKTFEDY CCCHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCHHHHHHH CNNLLNFVNNSKIKTSYFHINDYTDDAAGNGTYNYLNPNPPSGMRKDKGTGEITPWIVTY HHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHH WLDKLPSEVEAGVVTTVNPTDPWKSDPSNTAGNASIGDGTAGHPKDNMRQSFELIQAINN HHHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AAGAKKITNMEFDHEGGGAYQDATPYGGVNGQPVGIGYTKWLWNRYMPESVRFTDQDASQ HCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCCCEECCCCCCC QGFAGHYSYGFVNYRTEAWAESSGGSIEAFAENYWFGELEYEPNEFDFAMEFSVDRDTRL CCCCCEEEEEEEEECHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCHHHH HQFLSTETMTEALGENPGKIIQGNIDNDYPNGQIKGAGTSLN HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA