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The map label for this gene is dnaJ [H]

Identifier: 33864242

GI number: 33864242

Start: 2087206

End: 2087904

Strand: Reverse

Name: dnaJ [H]

Synonym: PMT1977

Alternate gene names: 33864242

Gene position: 2087904-2087206 (Counterclockwise)

Preceding gene: 33864243

Following gene: 33864241

Centisome position: 86.6

GC content: 52.65

Gene sequence:

>699_bases
ATGGCTGCAGATCCTTACCAGGTGTTGGGAGTAACCTCCACCGCTAGCTCGGCTGAGATCAAGGCTGCCTATCGCCAGTT
GGTGAAAAGGCATCACCCTGACGCTGGTGGGGATGAGCAGGAGATTCTTGCGCTCAATGCAGCTTGGGAGGTTTTGGGGG
ATTCAGAGCATCGACGCGCCTATGACCGCATAAGAACGCATGGTGTTTTAGTTGCTGACGAAGCGCATCAGCGTGGCGTT
CGCAATGCTCGTGCTAGTGCTGCTGCTCGAGCGACCAAAGGCCAGGCAGCAGCAGCAGATGAGGCTCTTTTGCAGTGGAT
CAAGCAGGTTTATGTCCCAATTGATCGATTGTTGGGGCAAGTGATCAATCCTTTTCCTGCTCAGTTTCGTTCTCTTTCGG
CTGACCCTTACGACGATTCGTTGATGGAGGTCTTTTGCACTTACCTGAAAGACAGTAGCAATCGGATTGAAAAGGTGAAT
AGCCTTTATCGAGCTTTGCCTATCCCTGCGTCCGCCCAAGGTTTTGGCTTGAGCTTGTATCACTGCCTCTCCCAAGTAGA
AGACGCTTTGGCCGAGTTGGAGCGCTACACGATGGGCTATGTCGATAGTTATCTCCACGATGGTCGAGAGATGTTGCGGG
AAGCCAAAAAGCGGCGTTTACGCTTAAAGGAGGAACGCCGTCGGCTGGAGATTTCGTGA

Upstream 100 bases:

>100_bases
TTGGTGAGCGTTATCTATCAACGCCGATGTTTAGCGCTGCTTCGGCGGTGCCGGCGCAGCGTGATGGATACCTTTGATGT
CTTCAAAGCCGCTGGCTGCT

Downstream 100 bases:

>100_bases
AAGCTGCCTGGCGCTTTTGGTCGTTTATTGCTCTGATCTGGTTGCTGTCTACGGGCATCGATCGGATCTGGTGGCATCAC
TACGCCAGCATTCCCTCTTG

Product: heat shock protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MAADPYQVLGVTSTASSAEIKAAYRQLVKRHHPDAGGDEQEILALNAAWEVLGDSEHRRAYDRIRTHGVLVADEAHQRGV
RNARASAAARATKGQAAAADEALLQWIKQVYVPIDRLLGQVINPFPAQFRSLSADPYDDSLMEVFCTYLKDSSNRIEKVN
SLYRALPIPASAQGFGLSLYHCLSQVEDALAELERYTMGYVDSYLHDGREMLREAKKRRLRLKEERRRLEIS

Sequences:

>Translated_232_residues
MAADPYQVLGVTSTASSAEIKAAYRQLVKRHHPDAGGDEQEILALNAAWEVLGDSEHRRAYDRIRTHGVLVADEAHQRGV
RNARASAAARATKGQAAAADEALLQWIKQVYVPIDRLLGQVINPFPAQFRSLSADPYDDSLMEVFCTYLKDSSNRIEKVN
SLYRALPIPASAQGFGLSLYHCLSQVEDALAELERYTMGYVDSYLHDGREMLREAKKRRLRLKEERRRLEIS
>Mature_231_residues
AADPYQVLGVTSTASSAEIKAAYRQLVKRHHPDAGGDEQEILALNAAWEVLGDSEHRRAYDRIRTHGVLVADEAHQRGVR
NARASAAARATKGQAAAADEALLQWIKQVYVPIDRLLGQVINPFPAQFRSLSADPYDDSLMEVFCTYLKDSSNRIEKVNS
LYRALPIPASAQGFGLSLYHCLSQVEDALAELERYTMGYVDSYLHDGREMLREAKKRRLRLKEERRRLEIS

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 26084; Mature: 25953

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADPYQVLGVTSTASSAEIKAAYRQLVKRHHPDAGGDEQEILALNAAWEVLGDSEHRRA
CCCCCCHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
YDRIRTHGVLVADEAHQRGVRNARASAAARATKGQAAAADEALLQWIKQVYVPIDRLLGQ
HHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VINPFPAQFRSLSADPYDDSLMEVFCTYLKDSSNRIEKVNSLYRALPIPASAQGFGLSLY
HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
HCLSQVEDALAELERYTMGYVDSYLHDGREMLREAKKRRLRLKEERRRLEIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AADPYQVLGVTSTASSAEIKAAYRQLVKRHHPDAGGDEQEILALNAAWEVLGDSEHRRA
CCCCCHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
YDRIRTHGVLVADEAHQRGVRNARASAAARATKGQAAAADEALLQWIKQVYVPIDRLLGQ
HHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VINPFPAQFRSLSADPYDDSLMEVFCTYLKDSSNRIEKVNSLYRALPIPASAQGFGLSLY
HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
HCLSQVEDALAELERYTMGYVDSYLHDGREMLREAKKRRLRLKEERRRLEIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA