| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864236
Identifier: 33864236
GI number: 33864236
Start: 2081185
End: 2082396
Strand: Direct
Name: 33864236
Synonym: PMT1971
Alternate gene names: NA
Gene position: 2081185-2082396 (Clockwise)
Preceding gene: 33864235
Following gene: 33864237
Centisome position: 86.32
GC content: 55.2
Gene sequence:
>1212_bases TTGGCGAAGCTGCTGCTGTTGAGTAATGGACACGGGGAAGACCTTTCCGGTGCCCTACTAGGCAAAACCCTGCTCAACCT CGGCCATCAACTAGAGGCCCTGCCTTTGGTCGGTCATGGTCATGCCTATACCGAGGCAGGAATCAAAATCCTTGGACAGG CCAAAGCATTCAGCACAGGCGGGCTTGGATACACCAGTCTTCGAGGCAGGCTGACTGAACTGCTACAAGGCCAAGTGTTC TATCTCCTAAGGCGCCTGGGACGTTTGTTGCAGGTGGCAGACCACTACGACCTGCTGGTGGTGATTGGCGATGTGATCCC TGTGATGGCAGCTTGGCTTAGCTGCCGTCCCGTCGCGATCTACCTAGTGGCTTATTCCAGTCACTATGAAGGTCGGCTGC GATTGCCTTGGCCTTGTGGCAGCTGTCTGAAAAGTAAGCGGTTTTTGGGTGTTTACAGCCGCGACGAGCTCACCGCAACA GACCTCACGGCTCAACTTCAACGCCCAGTGAGCTTTCTGGGCAATCCCTTTATGGATCCAGTCCTCACACCTCAAGCACC CTTACCAAGCTGCCGTTATCGCCTAGGACTTCTGCCTGGCAGCCGCCTCCCAGAACTAGAACACAACCTGCTGTTGCTGT TGGCGATGGTGGAAAATCTTCCAGAACAACTACTAGCCTGCGATGAAATAAGCCTAGATCTTGCACTGGTCCCAGCTCTA GACGACAGCAGCCTGGCTCAATTAGTCGCTCAAAAAGGCTGGCAAATGCAACCTGGTATTGGCAACGCAACACGCACCAA GCTTGTGCTCGGTCAACGACACATCACCTTGCAACGCAACTGTTTCATTGCGGTCCTTCAGAGCAGCGACCTCCTGATCA GCATGGCGGGCACGGCGACTGAACAAGCGGTAGGACTCGCTAAGCCAGTGCTACAACTTCCAGGGATGGGGCCCCAATTC ACCGCCGCATTCGCAGAAGCTCAGCGCCGACTACTCGGGCCCACTGTGTTTTGTGCTGGTGGGAAGCCTGGCGAAGCGCT CAACCTGCAGAACACTGCCAAACTGACTCTGGAGCTATTGAAACGCAGCCAAGCGGACCCTGACCTGCAACAACAATGCC AGAAGCAGGCCTTGCAAAGACTCGGGGTGGCAGGTGGCGGGCAACGATTAGCCCAAGCCATTACAAACATGCTCACTGAA AGACATCAATGA
Upstream 100 bases:
>100_bases GAGTTTGCAAAAGACCTCAAGGACTCAATCGCCGATGGGTTACTTCGCAGACCAAATTGGCATGCTTTGAAGAAAGTAAA GGCTTGGCTGGAGCTCTGAT
Downstream 100 bases:
>100_bases CAACTCCTTCTGCCGATCCCCAATGGAAACAGTGGTTGGACCGACTGCTGATCATCGATGTGTTCCTAGTGATTGCCGGA GCACTCTGGTTTGTCACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAKLLLLSNGHGEDLSGALLGKTLLNLGHQLEALPLVGHGHAYTEAGIKILGQAKAFSTGGLGYTSLRGRLTELLQGQVF YLLRRLGRLLQVADHYDLLVVIGDVIPVMAAWLSCRPVAIYLVAYSSHYEGRLRLPWPCGSCLKSKRFLGVYSRDELTAT DLTAQLQRPVSFLGNPFMDPVLTPQAPLPSCRYRLGLLPGSRLPELEHNLLLLLAMVENLPEQLLACDEISLDLALVPAL DDSSLAQLVAQKGWQMQPGIGNATRTKLVLGQRHITLQRNCFIAVLQSSDLLISMAGTATEQAVGLAKPVLQLPGMGPQF TAAFAEAQRRLLGPTVFCAGGKPGEALNLQNTAKLTLELLKRSQADPDLQQQCQKQALQRLGVAGGGQRLAQAITNMLTE RHQ
Sequences:
>Translated_403_residues MAKLLLLSNGHGEDLSGALLGKTLLNLGHQLEALPLVGHGHAYTEAGIKILGQAKAFSTGGLGYTSLRGRLTELLQGQVF YLLRRLGRLLQVADHYDLLVVIGDVIPVMAAWLSCRPVAIYLVAYSSHYEGRLRLPWPCGSCLKSKRFLGVYSRDELTAT DLTAQLQRPVSFLGNPFMDPVLTPQAPLPSCRYRLGLLPGSRLPELEHNLLLLLAMVENLPEQLLACDEISLDLALVPAL DDSSLAQLVAQKGWQMQPGIGNATRTKLVLGQRHITLQRNCFIAVLQSSDLLISMAGTATEQAVGLAKPVLQLPGMGPQF TAAFAEAQRRLLGPTVFCAGGKPGEALNLQNTAKLTLELLKRSQADPDLQQQCQKQALQRLGVAGGGQRLAQAITNMLTE RHQ >Mature_402_residues AKLLLLSNGHGEDLSGALLGKTLLNLGHQLEALPLVGHGHAYTEAGIKILGQAKAFSTGGLGYTSLRGRLTELLQGQVFY LLRRLGRLLQVADHYDLLVVIGDVIPVMAAWLSCRPVAIYLVAYSSHYEGRLRLPWPCGSCLKSKRFLGVYSRDELTATD LTAQLQRPVSFLGNPFMDPVLTPQAPLPSCRYRLGLLPGSRLPELEHNLLLLLAMVENLPEQLLACDEISLDLALVPALD DSSLAQLVAQKGWQMQPGIGNATRTKLVLGQRHITLQRNCFIAVLQSSDLLISMAGTATEQAVGLAKPVLQLPGMGPQFT AAFAEAQRRLLGPTVFCAGGKPGEALNLQNTAKLTLELLKRSQADPDLQQQCQKQALQRLGVAGGGQRLAQAITNMLTER HQ
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43635; Mature: 43503
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLLLLSNGHGEDLSGALLGKTLLNLGHQLEALPLVGHGHAYTEAGIKILGQAKAFSTG CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHEEECCCCCCCC GLGYTSLRGRLTELLQGQVFYLLRRLGRLLQVADHYDLLVVIGDVIPVMAAWLSCRPVAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE YLVAYSSHYEGRLRLPWPCGSCLKSKRFLGVYSRDELTATDLTAQLQRPVSFLGNPFMDP EEEEECCCCCCEEECCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC VLTPQAPLPSCRYRLGLLPGSRLPELEHNLLLLLAMVENLPEQLLACDEISLDLALVPAL CCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC DDSSLAQLVAQKGWQMQPGIGNATRTKLVLGQRHITLQRNCFIAVLQSSDLLISMAGTAT CCHHHHHHHHHCCCEECCCCCCCHHHEEEECCCCEEEECCEEEEEEECCCEEEEECCCCH EQAVGLAKPVLQLPGMGPQFTAAFAEAQRRLLGPTVFCAGGKPGEALNLQNTAKLTLELL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHH KRSQADPDLQQQCQKQALQRLGVAGGGQRLAQAITNMLTERHQ HHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKLLLLSNGHGEDLSGALLGKTLLNLGHQLEALPLVGHGHAYTEAGIKILGQAKAFSTG CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHEEECCCCCCCC GLGYTSLRGRLTELLQGQVFYLLRRLGRLLQVADHYDLLVVIGDVIPVMAAWLSCRPVAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE YLVAYSSHYEGRLRLPWPCGSCLKSKRFLGVYSRDELTATDLTAQLQRPVSFLGNPFMDP EEEEECCCCCCEEECCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC VLTPQAPLPSCRYRLGLLPGSRLPELEHNLLLLLAMVENLPEQLLACDEISLDLALVPAL CCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC DDSSLAQLVAQKGWQMQPGIGNATRTKLVLGQRHITLQRNCFIAVLQSSDLLISMAGTAT CCHHHHHHHHHCCCEECCCCCCCHHHEEEECCCCEEEECCEEEEEEECCCEEEEECCCCH EQAVGLAKPVLQLPGMGPQFTAAFAEAQRRLLGPTVFCAGGKPGEALNLQNTAKLTLELL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHH KRSQADPDLQQQCQKQALQRLGVAGGGQRLAQAITNMLTERHQ HHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA