| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864212
Identifier: 33864212
GI number: 33864212
Start: 2058403
End: 2058861
Strand: Reverse
Name: 33864212
Synonym: PMT1947
Alternate gene names: NA
Gene position: 2058861-2058403 (Counterclockwise)
Preceding gene: 33864213
Following gene: 33864210
Centisome position: 85.4
GC content: 51.2
Gene sequence:
>459_bases GTGCCTGAAGAGCCCTGTCAATGCCCGGACTGTCAAAGGTTTTACCGGGAGCATGATCGGCTGATTCGTGAGTGCCCTAC CTTGCGTCATCAGCAGGAGCTCAATTGGGCTGCTTTGCAGTCTTTTCGAACACTTTCTGGTCGTGTTCTTGAAGATCTGC AGAAGCAATATGGCTCCCAAGCCAATGAGGCTGCTAATACTCACGCCACTCCTGTTAGTGGGGGAGAAGAGCCAGCTGAT GCAATCCAGCAATCGATCGCTGATTTGGAGAACATCAATGCGCACCTGTTTTCCATCGAAGCCCTGATGGAACGCATCTT TGATGTGAAGGTGCCAGAAGCTGTTGAGCAGAAATTCCGAGAACTTGCAGGTGAACTAGCTCCAGATCCTCTCAATGCAG ATCGGCTTCGCCTCAACCGTCTTCTGCATCAGACCCCTGATTTGCCTGATCGCAATTAG
Upstream 100 bases:
>100_bases GCTCCAGGCGATACAGATTCGGGGCAGGGCAGTTTTTCAAGCGAGCCTCCTCTTGCGGCTTAGTAGATGGCATGATGGGA TCTGAGCTAGACGGAGTGCG
Downstream 100 bases:
>100_bases CTTTCCTAATCCATCGTTTATTGATTCTTCAGGGCACATCGCAGGTAATTTCTACAGGGAAGGGCTCAGCTTTCCAGATT GTCTGACAGTAGTCTTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQANEAANTHATPVSGGEEPAD AIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFRELAGELAPDPLNADRLRLNRLLHQTPDLPDRN
Sequences:
>Translated_152_residues MPEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQANEAANTHATPVSGGEEPAD AIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFRELAGELAPDPLNADRLRLNRLLHQTPDLPDRN >Mature_151_residues PEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQANEAANTHATPVSGGEEPADA IQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFRELAGELAPDPLNADRLRLNRLLHQTPDLPDRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17369; Mature: 17237
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQ CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ANEAANTHATPVSGGEEPADAIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ELAGELAPDPLNADRLRLNRLLHQTPDLPDRN HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PEEPCQCPDCQRFYREHDRLIRECPTLRHQQELNWAALQSFRTLSGRVLEDLQKQYGSQ CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ANEAANTHATPVSGGEEPADAIQQSIADLENINAHLFSIEALMERIFDVKVPEAVEQKFR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ELAGELAPDPLNADRLRLNRLLHQTPDLPDRN HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA