| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yeaD [H]
Identifier: 33864207
GI number: 33864207
Start: 2052179
End: 2053075
Strand: Reverse
Name: yeaD [H]
Synonym: PMT1942
Alternate gene names: 33864207
Gene position: 2053075-2052179 (Counterclockwise)
Preceding gene: 33864208
Following gene: 33864203
Centisome position: 85.16
GC content: 48.38
Gene sequence:
>897_bases ATGATTGACGGCGATAGTTCTCCTCTTCTACGCAAGCAGAGTCCCTATCCTCATTGGCAGTATCTGCACCCAGAAAGTGG TGATCGTTTGCGGATTGTGCCTGAGCGAGGTGGTTTAGTCACTGATTGGTGTTGTAACGGCCATGAGCTGCTCTATTTGG ATCAGGAGCGTTTTGCAGATCCAGAGAAAAGTATTCGCGGAGGCATTCCAGTGTTGTTTCCCATCTGCGGAAACCTGCCA GGTGATTTATTACCCTTGCCAAGTGGTGAGTTCATTCTTAAACAGCATGGTTTTGCTAGGGATCAGCCTTGGGAATTACA GTTATTAGAAGATCACAGTGGCGTGAAGCTTAGCTTTGTTGATAGTGAAGAGACGCGTGCTGCTTATCCATTTTCTTTTT TGCTTGAGATGGTGGTGCGCCCTATTCGCAATGCTTTAGAGATCGACGTAAATGTACATAACCGTAGTCAAAGTGCGATG CCCTTCAGTTTTGGTTTACACCCTTATTTCAAGGTGACTGATTTGAACAAGGTTCGCCTCGAAGGCTTGCCAAATTCATG TCTCAATCATTTGCAGATGGCAGAAGCTGAAACCGCCATCCAATTGGCAGCTTTAACTGAGGGGGTGGACTTCTTGACTC GCCCTGCGGGGCCAGTCACCCTTGTGGATGAAGCCTCTGGGAGATCTCTGCAGCTTCAGCATGAGAATCCCATGGATCTC ACTGTTGTGTGGACTGATCCGCCGCGGCAGATGTTATGCCTTGAACCTTGGACTGGTCCGCGGGAGGCATTGATTAGTGG TGATCGCAAGTTGGAGATCGAAGCTGGTGGCCAGCAGAGGCTGAGATGCTCCTTTTCAATAAATCTTGAGAAAACTGTTC GTGCGGCTAGTTGTTAA
Upstream 100 bases:
>100_bases CTTTTAAATGCTGGACATTGCCCTCATGATGAGGTGCCTGACTTGGTGAATTCTGAATTACTGGAGTGGCTAAATGGTTT GAGTATTGCTTAAATTAGGA
Downstream 100 bases:
>100_bases CAACATCTTTGGATTAGAAGGTGGCAACGACTCCGAGGGGCTCCAGCCTTCATGTGTTCTAAATCGTCGAGGACGGCTGG AACACCTTGTGTAAAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MIDGDSSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYLDQERFADPEKSIRGGIPVLFPICGNLP GDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSFVDSEETRAAYPFSFLLEMVVRPIRNALEIDVNVHNRSQSAM PFSFGLHPYFKVTDLNKVRLEGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPAGPVTLVDEASGRSLQLQHENPMDL TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGQQRLRCSFSINLEKTVRAASC
Sequences:
>Translated_298_residues MIDGDSSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYLDQERFADPEKSIRGGIPVLFPICGNLP GDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSFVDSEETRAAYPFSFLLEMVVRPIRNALEIDVNVHNRSQSAM PFSFGLHPYFKVTDLNKVRLEGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPAGPVTLVDEASGRSLQLQHENPMDL TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGQQRLRCSFSINLEKTVRAASC >Mature_298_residues MIDGDSSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYLDQERFADPEKSIRGGIPVLFPICGNLP GDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSFVDSEETRAAYPFSFLLEMVVRPIRNALEIDVNVHNRSQSAM PFSFGLHPYFKVTDLNKVRLEGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPAGPVTLVDEASGRSLQLQHENPMDL TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGQQRLRCSFSINLEKTVRAASC
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=225, Percent_Identity=28.8888888888889, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323746, Length=261, Percent_Identity=24.5210727969349, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI19921284, Length=230, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 33446; Mature: 33446
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGDSSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYLDQERFAD CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECHHHCCC PEKSIRGGIPVLFPICGNLPGDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSFV HHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEEE DSEETRAAYPFSFLLEMVVRPIRNALEIDVNVHNRSQSAMPFSFGLHPYFKVTDLNKVRL CCCCCCEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCCCEEEEECCCEEEE EGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPAGPVTLVDEASGRSLQLQHENPMDL CCCCHHHHHHHHHHHHHHHEEEEHHHCCCHHHHCCCCCEEEEECCCCCEEEEECCCCCEE TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGQQRLRCSFSINLEKTVRAASC EEEECCCCCCEEEECCCCCHHHHHHCCCEEEEEECCCCEEEEEEEEECHHHHHHCCCC >Mature Secondary Structure MIDGDSSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYLDQERFAD CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECHHHCCC PEKSIRGGIPVLFPICGNLPGDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSFV HHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEEE DSEETRAAYPFSFLLEMVVRPIRNALEIDVNVHNRSQSAMPFSFGLHPYFKVTDLNKVRL CCCCCCEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCCCEEEEECCCEEEE EGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPAGPVTLVDEASGRSLQLQHENPMDL CCCCHHHHHHHHHHHHHHHEEEEHHHCCCHHHHCCCCCEEEEECCCCCEEEEECCCCCEE TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGQQRLRCSFSINLEKTVRAASC EEEECCCCCCEEEECCCCCHHHHHHCCCEEEEEECCCCEEEEEEEEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]