| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is tuaH [H]
Identifier: 33864194
GI number: 33864194
Start: 2036332
End: 2037540
Strand: Reverse
Name: tuaH [H]
Synonym: PMT1928
Alternate gene names: 33864194
Gene position: 2037540-2036332 (Counterclockwise)
Preceding gene: 33864195
Following gene: 33864193
Centisome position: 84.51
GC content: 52.36
Gene sequence:
>1209_bases ATGGCCGATTTTATTGTTCTTTCCACCGCAGACTGGGATCATCCACTGTGGACCAATAAGCAGCATACGGCTCTTGCGCT GGCTGAGGCTGGCCACCGTGTGTTGTATGTGGAATCGCTTGGGATTCGTGCACCTCGGGTTGGAATTGCGGACCGAGCCC GAATCATTCGGCGTCTTCGCCGAATGATTCGGTTGCCCTATAGGCGTCACAAAAACCTCTGGGTCTGGTCGCCCCCAGTC ATCCCTGGTGGGCATTCAGGTTTGAAATTGGCTTTGAATCGTTTTCTGCTGCGAATTGGATTGTTTGTGGCGACTCGATC GTTGAAATTCCGATTCCAGATTTTATGGACTTATAACCCCCTCACAACTCTCTATCTCGATCTCAGCCGTTTTGCAGCTT CTGTTTACCACTGTGTCGATCGCATTCAGGAGCAGCCAGGTATGCCTTCTCAGCTGATCGAAGTCAATGAGCGGCAGTTG TCGCGTCAGGTTGATGTGCTGTTCACCACCTCGCCTGAATTGCAGGCCACTCATCTTCGCTGGAATCAAGCTGCTCGAAT GTTTGGCAATGTGGCCGATTATCGTCATTTCAATCATGCGCTTCAGCCTTTAACTTGCCCACAATCTTTAAGATCAAGTC CTCGTCCTCGACTCGTATTTATGGGGGCGATTGATGCCTACAAGTTAGATCTCAGGCTCTTGAATTATCTGATCAGTCGT AATCCTGGCTGGGATTTTGTGCTGATTGGTCCGGTTGGCGAATGTGATCCGTCTACGGATGTGGCTGCTCTGGAGAGTTG CCCAAATGTTCAGTTGGTTGGTCCACAGCCCTATGAAGCATTACCAGCCTGGTTAGCCCACGTGGATGTGGCCCTTCTGC CTTTGCAGCTCAACGGCTACACCCGCAACATGTTCCCGATGAAATTCTTCGAGTATTTGTCTGCAGGGTTACCTGTGGTG GCCACAGCGATTCCCGCTTTGATTGCTCATGCCGACGTGGCTTGCCTTTGCGAGCCTCAGGTCGAGATCTTTGAACAGGC GATTCGAGCAGTCTTGGCTGGTCAAGGGCCCAATCTGGATCAACGCCTTGCCAGAGCACGGACTCAGACATATCAAACTC GAACGGAGGCGATGCTCGAGATCCTTCAACAGCAAGGGCTGCTCGCGCGCTTTGGGTCGCACTCGCGAGTCCAGGTGACC GGTGCATGA
Upstream 100 bases:
>100_bases TGGCAAACGGCAAAATTATTGCCAATGGCACGTTTGAAGAACTGCAGAGAGAGTCGGCCAGTTTCCGAGAAATGGCGTTA ATCGAAGTTGAATAGTTCTC
Downstream 100 bases:
>100_bases GCAGCAGCGAGGTGTCGATGCGGCGCGTGGTGCTCTACATCGATAGTTTCAAACTCGGTGGTGCTGAGCGCATCACCCTT ACTTGGTCGTCATGGTTGCG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MADFIVLSTADWDHPLWTNKQHTALALAEAGHRVLYVESLGIRAPRVGIADRARIIRRLRRMIRLPYRRHKNLWVWSPPV IPGGHSGLKLALNRFLLRIGLFVATRSLKFRFQILWTYNPLTTLYLDLSRFAASVYHCVDRIQEQPGMPSQLIEVNERQL SRQVDVLFTTSPELQATHLRWNQAARMFGNVADYRHFNHALQPLTCPQSLRSSPRPRLVFMGAIDAYKLDLRLLNYLISR NPGWDFVLIGPVGECDPSTDVAALESCPNVQLVGPQPYEALPAWLAHVDVALLPLQLNGYTRNMFPMKFFEYLSAGLPVV ATAIPALIAHADVACLCEPQVEIFEQAIRAVLAGQGPNLDQRLARARTQTYQTRTEAMLEILQQQGLLARFGSHSRVQVT GA
Sequences:
>Translated_402_residues MADFIVLSTADWDHPLWTNKQHTALALAEAGHRVLYVESLGIRAPRVGIADRARIIRRLRRMIRLPYRRHKNLWVWSPPV IPGGHSGLKLALNRFLLRIGLFVATRSLKFRFQILWTYNPLTTLYLDLSRFAASVYHCVDRIQEQPGMPSQLIEVNERQL SRQVDVLFTTSPELQATHLRWNQAARMFGNVADYRHFNHALQPLTCPQSLRSSPRPRLVFMGAIDAYKLDLRLLNYLISR NPGWDFVLIGPVGECDPSTDVAALESCPNVQLVGPQPYEALPAWLAHVDVALLPLQLNGYTRNMFPMKFFEYLSAGLPVV ATAIPALIAHADVACLCEPQVEIFEQAIRAVLAGQGPNLDQRLARARTQTYQTRTEAMLEILQQQGLLARFGSHSRVQVT GA >Mature_401_residues ADFIVLSTADWDHPLWTNKQHTALALAEAGHRVLYVESLGIRAPRVGIADRARIIRRLRRMIRLPYRRHKNLWVWSPPVI PGGHSGLKLALNRFLLRIGLFVATRSLKFRFQILWTYNPLTTLYLDLSRFAASVYHCVDRIQEQPGMPSQLIEVNERQLS RQVDVLFTTSPELQATHLRWNQAARMFGNVADYRHFNHALQPLTCPQSLRSSPRPRLVFMGAIDAYKLDLRLLNYLISRN PGWDFVLIGPVGECDPSTDVAALESCPNVQLVGPQPYEALPAWLAHVDVALLPLQLNGYTRNMFPMKFFEYLSAGLPVVA TAIPALIAHADVACLCEPQVEIFEQAIRAVLAGQGPNLDQRLARARTQTYQTRTEAMLEILQQQGLLARFGSHSRVQVTG A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45437; Mature: 45306
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFIVLSTADWDHPLWTNKQHTALALAEAGHRVLYVESLGIRAPRVGIADRARIIRRLR CCCEEEEEECCCCCCCCCCCCCCEEEEHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RMIRLPYRRHKNLWVWSPPVIPGGHSGLKLALNRFLLRIGLFVATRSLKFRFQILWTYNP HHHHCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECC LTTLYLDLSRFAASVYHCVDRIQEQPGMPSQLIEVNERQLSRQVDVLFTTSPELQATHLR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEHHHH WNQAARMFGNVADYRHFNHALQPLTCPQSLRSSPRPRLVFMGAIDAYKLDLRLLNYLISR HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHC NPGWDFVLIGPVGECDPSTDVAALESCPNVQLVGPQPYEALPAWLAHVDVALLPLQLNGY CCCCCEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHEEEEEEECCC TRNMFPMKFFEYLSAGLPVVATAIPALIAHADVACLCEPQVEIFEQAIRAVLAGQGPNLD CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCHH QRLARARTQTYQTRTEAMLEILQQQGLLARFGSHSRVQVTGA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECC >Mature Secondary Structure ADFIVLSTADWDHPLWTNKQHTALALAEAGHRVLYVESLGIRAPRVGIADRARIIRRLR CCEEEEEECCCCCCCCCCCCCCEEEEHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RMIRLPYRRHKNLWVWSPPVIPGGHSGLKLALNRFLLRIGLFVATRSLKFRFQILWTYNP HHHHCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECC LTTLYLDLSRFAASVYHCVDRIQEQPGMPSQLIEVNERQLSRQVDVLFTTSPELQATHLR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEHHHH WNQAARMFGNVADYRHFNHALQPLTCPQSLRSSPRPRLVFMGAIDAYKLDLRLLNYLISR HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHC NPGWDFVLIGPVGECDPSTDVAALESCPNVQLVGPQPYEALPAWLAHVDVALLPLQLNGY CCCCCEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHEEEEEEECCC TRNMFPMKFFEYLSAGLPVVATAIPALIAHADVACLCEPQVEIFEQAIRAVLAGQGPNLD CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCHH QRLARARTQTYQTRTEAMLEILQQQGLLARFGSHSRVQVTGA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10048024; 9384377 [H]