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The map label for this gene is 33864161

Identifier: 33864161

GI number: 33864161

Start: 1998721

End: 1999728

Strand: Direct

Name: 33864161

Synonym: PMT1895

Alternate gene names: NA

Gene position: 1998721-1999728 (Clockwise)

Preceding gene: 33864160

Following gene: 33864162

Centisome position: 82.9

GC content: 54.86

Gene sequence:

>1008_bases
ATGAGCCGCCTGTTCTCAAACCTTTTCAACCTTCTACTGATTGCGGCCATCGGGTTCGGCCTCAGTGGGTGCGTCACCAG
CCGGCTTCCGGTCGCCAGCACCAGCCCATGGCAACCCTTGGAGTTGAACACTGAGTCAAATCCACTGGACATAAGTTTCT
CTGACGCCAACCACGGCTTCGTTGTTGGTACCAACCGCTTAATCATGGAATCAAATGATGGGGGTGTCAGCTGGAAGAAG
CGCAGCTTGGATCTTGAAGAAGATGAAAACTTCCGGCTCATCAGTATCGATTTCAACGGCAATGAGGGTTGGATCGCTGG
GCAGCCAGGGCTGGTGATGCACAGCACTGACGCAGGCAAGAACTGGTCACGCCTGAAGCTTGAAAACAAACTCCCAGGGG
ATCCATATTTGATTACCAACCTAGGTCCCAATAATGCTGAGCTTGCCACCAACGCAGGTGCCATCTATCGCACAAGCGAT
GGTGGCACCACCTGGAAAGCAACTGTGAGTGAAGCGGCCGGTGCAGTGCGCGACCTCAGGCGCAGTGCAGCTGGCAATTA
CGTGAGCGTGAGCAGTCTGGGCAATTTCTTCTCCACCTTGGATCTAGGCCAGGATGTTTGGCAAAACCATGAGAGGGTCA
GCAGCAAGCGGGTGCAGAGCCTGGGTTATCAACCCAACGGTGAACTATGGATGGTGGCCAGGGGGGCCGAGATCCGCTTG
AACGATCAACCCGGAAACGTCGACAGCTGGGGAAAAGCGATGATTCCAATCACCAATGGCTACAACTACCTAGATCTGTC
CTGGGATCCCAACGGAGGCATCTGGGCAGCGGGCGGCAACGGAACTCTTATTAAGACTCTGGATGACGGAAAAAGCTGGC
AGATCGATCCCATGGGCGACACACAGCCCTCGAACTTGATCAGGATCCTGTTCGACACCAGCTCTGAAAGCCAAGCCAAA
GGGTTTGTTCTTGGGGAACGAGGCCACCTTCTGCGCTGGGTGGGCTAA

Upstream 100 bases:

>100_bases
CTTAACACCCGGGCAAAAGAATGTCCTGATCTTTGGAGGCCTGGCACTGGCCTTCGCCTTCTTCCTCTCCCTCTACTCAC
TGCGTTAACGCATCCCTGCC

Downstream 100 bases:

>100_bases
GGCTTGACCTACAGCCAAATGAGCAACGCTCTGTAACCATGCCGTTCACCAGACGCAGTGTTGAGGCTCAGCCTTATAGG
ATCTAAAAGCTGATACGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSRLFSNLFNLLLIAAIGFGLSGCVTSRLPVASTSPWQPLELNTESNPLDISFSDANHGFVVGTNRLIMESNDGGVSWKK
RSLDLEEDENFRLISIDFNGNEGWIAGQPGLVMHSTDAGKNWSRLKLENKLPGDPYLITNLGPNNAELATNAGAIYRTSD
GGTTWKATVSEAAGAVRDLRRSAAGNYVSVSSLGNFFSTLDLGQDVWQNHERVSSKRVQSLGYQPNGELWMVARGAEIRL
NDQPGNVDSWGKAMIPITNGYNYLDLSWDPNGGIWAAGGNGTLIKTLDDGKSWQIDPMGDTQPSNLIRILFDTSSESQAK
GFVLGERGHLLRWVG

Sequences:

>Translated_335_residues
MSRLFSNLFNLLLIAAIGFGLSGCVTSRLPVASTSPWQPLELNTESNPLDISFSDANHGFVVGTNRLIMESNDGGVSWKK
RSLDLEEDENFRLISIDFNGNEGWIAGQPGLVMHSTDAGKNWSRLKLENKLPGDPYLITNLGPNNAELATNAGAIYRTSD
GGTTWKATVSEAAGAVRDLRRSAAGNYVSVSSLGNFFSTLDLGQDVWQNHERVSSKRVQSLGYQPNGELWMVARGAEIRL
NDQPGNVDSWGKAMIPITNGYNYLDLSWDPNGGIWAAGGNGTLIKTLDDGKSWQIDPMGDTQPSNLIRILFDTSSESQAK
GFVLGERGHLLRWVG
>Mature_334_residues
SRLFSNLFNLLLIAAIGFGLSGCVTSRLPVASTSPWQPLELNTESNPLDISFSDANHGFVVGTNRLIMESNDGGVSWKKR
SLDLEEDENFRLISIDFNGNEGWIAGQPGLVMHSTDAGKNWSRLKLENKLPGDPYLITNLGPNNAELATNAGAIYRTSDG
GTTWKATVSEAAGAVRDLRRSAAGNYVSVSSLGNFFSTLDLGQDVWQNHERVSSKRVQSLGYQPNGELWMVARGAEIRLN
DQPGNVDSWGKAMIPITNGYNYLDLSWDPNGGIWAAGGNGTLIKTLDDGKSWQIDPMGDTQPSNLIRILFDTSSESQAKG
FVLGERGHLLRWVG

Specific function: Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 BNR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YC48L_PROMM (Q7V4Q3)

Other databases:

- EMBL:   BX548175
- RefSeq:   NP_895721.1
- ProteinModelPortal:   Q7V4Q3
- STRING:   Q7V4Q3
- GeneID:   1729090
- GenomeReviews:   BX548175_GR
- KEGG:   pmt:PMT1895
- NMPDR:   fig|74547.1.peg.1888
- eggNOG:   COG4447
- HOGENOM:   HBG285032
- OMA:   GFLVGSN
- ProtClustDB:   PRK13684
- BioCyc:   PMAR74547:PMT1895-MONOMER
- HAMAP:   MF_01348
- InterPro:   IPR002860
- InterPro:   IPR016705
- PIRSF:   PIRSF017875

Pfam domain/function: PF02012 BNR

EC number: NA

Molecular weight: Translated: 36463; Mature: 36332

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLFSNLFNLLLIAAIGFGLSGCVTSRLPVASTSPWQPLELNTESNPLDISFSDANHGF
CHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCE
VVGTNRLIMESNDGGVSWKKRSLDLEEDENFRLISIDFNGNEGWIAGQPGLVMHSTDAGK
EEECCEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEECCCCC
NWSRLKLENKLPGDPYLITNLGPNNAELATNAGAIYRTSDGGTTWKATVSEAAGAVRDLR
CEEEEEECCCCCCCCEEEEECCCCCCEEEECCCEEEEECCCCCEEEEEHHHHHHHHHHHH
RSAAGNYVSVSSLGNFFSTLDLGQDVWQNHERVSSKRVQSLGYQPNGELWMVARGAEIRL
HHHCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE
NDQPGNVDSWGKAMIPITNGYNYLDLSWDPNGGIWAAGGNGTLIKTLDDGKSWQIDPMGD
CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCEEECCCCC
TQPSNLIRILFDTSSESQAKGFVLGERGHLLRWVG
CCCCCEEEEEEECCCCCCCCCEEEECCCCEEEECC
>Mature Secondary Structure 
SRLFSNLFNLLLIAAIGFGLSGCVTSRLPVASTSPWQPLELNTESNPLDISFSDANHGF
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCE
VVGTNRLIMESNDGGVSWKKRSLDLEEDENFRLISIDFNGNEGWIAGQPGLVMHSTDAGK
EEECCEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEECCCCC
NWSRLKLENKLPGDPYLITNLGPNNAELATNAGAIYRTSDGGTTWKATVSEAAGAVRDLR
CEEEEEECCCCCCCCEEEEECCCCCCEEEECCCEEEEECCCCCEEEEEHHHHHHHHHHHH
RSAAGNYVSVSSLGNFFSTLDLGQDVWQNHERVSSKRVQSLGYQPNGELWMVARGAEIRL
HHHCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE
NDQPGNVDSWGKAMIPITNGYNYLDLSWDPNGGIWAAGGNGTLIKTLDDGKSWQIDPMGD
CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCEEECCCCC
TQPSNLIRILFDTSSESQAKGFVLGERGHLLRWVG
CCCCCEEEEEEECCCCCCCCCEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642