Click here to switch to the map view.

The map label for this gene is ybhK [C]

Identifier: 33864156

GI number: 33864156

Start: 1995207

End: 1996529

Strand: Direct

Name: ybhK [C]

Synonym: PMT1890

Alternate gene names: 33864156

Gene position: 1995207-1996529 (Clockwise)

Preceding gene: 33864153

Following gene: 33864160

Centisome position: 82.76

GC content: 55.93

Gene sequence:

>1323_bases
ATGATCCGTTCTCGCAGAGCAGTGAGTTGGCTCCTACCTGGACTGGTCGTCAAGCGCTGGCTGCTCACTTCGGGCCTGGG
CCTTCTTATGGCACTTCTAGGAGCAGCCATCTGGGCGGACCTCAAGCCCATCTACTGGATCATCGAGACCCTCGTCTGGC
TACTGGGAACAATCACAACTGTGCTGCCACGCAGCATTACAGGTCCTTTAGTGGTCTTAATCGGAGCCGCCCTAGTGCTA
TGGGGACAAAGCCGCAGCTTTGGTTCGATCCAACAAGCACTAGCGCCCGACAAGGACACCGTGCTCGTCGACGCCCTTCG
TGCCAAAAGCAAACTCAACCGCGGCCCTAACATCGTCGCCATCGGAGGTGGAACAGGCCTCTCCACTCTGCTCAGTGGCC
TGAAGCGCTACAGCAGCAACATCACAGCGATCGTCACAGTGGCTGACGATGGCGGCAGTAGCGGAGTCCTGCGTCGCGAA
CTTGGTGTTCAGCCCCCAGGCGACATTCGCAACTGCCTGGCTGCACTCTCAACAGAAGAACCCCTGCTCACACGACTGTT
TCAATATCGTTTCTCAGCAGGTAGTGGCCTAGAGGGCCACAGCTTCGGCAATCTCTTTCTCTCTGCACTATCAGCCATCA
CGGGCAATCTAGAGACAGCCATCACAGCGTCTAGTCGAGTCCTCGCAGTTCAGGGTCAGGTCGTTCCCGCGACCAATGCA
GATGTACAGCTCTGGGCGGAACTGGAAAACGGCCAGCGCATTGAAGGGGAATCAGCGATCGGCAAGGCCCCAAGTCCAAT
CGTGAGGCTTGGCTGCTTGCCCGCACAACCACCAGCCCTGCCCCGCGCGCTAGAGGCAATCTCTAATGCAGACCTGATTC
TTCTAGGACCTGGCAGCCTCTACACATCCCTATTACCCAATTTGCTTGTACCGGCCTTAGTTCGAACCATCCAGCAGAGC
CGAGCACCGAAGCTTTACATCTGCAACTTAATGACTCAACCCGGCGAAACAGATGGCCTGGATGTTGTTGGTCACCTAAG
AGCAATCGAAGCCCAACTCGCCAGCCTGGGCATCAGCCAGAAACTATTCAATGCCGTTTTGGCCCAGGATGACCTAGGAG
AATCCCAATTGGTGAAGCACTATCAAGCACGAGGCGCTGAACCGGTCAACTGTGATGCTCAAGCACTCATCGCCAAGGGC
TATGAGTTGATGCAAGCTCCATTGCAAGGGAAAAGGCCTCGCGCAACACTGCGCCATGACCCACGCAGCCTTGCCCTAGC
GGTGATGCGCTTCTATCGAAAGTATAAAAAGAGTGCTCAATAA

Upstream 100 bases:

>100_bases
CGCGCATGTGACCTCGCCCAAACACCGCTTTACTCAGCGCCGCTCTCATCAGCGCCGCGCCAGTATCAAAGGGATAAAGG
CTGCTAGCGAAAGGGGTCTA

Downstream 100 bases:

>100_bases
GCATCCTGCATCTCATAAAAGTCTGGCTGCACATAATCTTTCCGCAGTGGCCAGCCCTTCCAGTCTTCAGGCATTAGCAA
TCTTTTCGGATGGGGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIRSRRAVSWLLPGLVVKRWLLTSGLGLLMALLGAAIWADLKPIYWIIETLVWLLGTITTVLPRSITGPLVVLIGAALVL
WGQSRSFGSIQQALAPDKDTVLVDALRAKSKLNRGPNIVAIGGGTGLSTLLSGLKRYSSNITAIVTVADDGGSSGVLRRE
LGVQPPGDIRNCLAALSTEEPLLTRLFQYRFSAGSGLEGHSFGNLFLSALSAITGNLETAITASSRVLAVQGQVVPATNA
DVQLWAELENGQRIEGESAIGKAPSPIVRLGCLPAQPPALPRALEAISNADLILLGPGSLYTSLLPNLLVPALVRTIQQS
RAPKLYICNLMTQPGETDGLDVVGHLRAIEAQLASLGISQKLFNAVLAQDDLGESQLVKHYQARGAEPVNCDAQALIAKG
YELMQAPLQGKRPRATLRHDPRSLALAVMRFYRKYKKSAQ

Sequences:

>Translated_440_residues
MIRSRRAVSWLLPGLVVKRWLLTSGLGLLMALLGAAIWADLKPIYWIIETLVWLLGTITTVLPRSITGPLVVLIGAALVL
WGQSRSFGSIQQALAPDKDTVLVDALRAKSKLNRGPNIVAIGGGTGLSTLLSGLKRYSSNITAIVTVADDGGSSGVLRRE
LGVQPPGDIRNCLAALSTEEPLLTRLFQYRFSAGSGLEGHSFGNLFLSALSAITGNLETAITASSRVLAVQGQVVPATNA
DVQLWAELENGQRIEGESAIGKAPSPIVRLGCLPAQPPALPRALEAISNADLILLGPGSLYTSLLPNLLVPALVRTIQQS
RAPKLYICNLMTQPGETDGLDVVGHLRAIEAQLASLGISQKLFNAVLAQDDLGESQLVKHYQARGAEPVNCDAQALIAKG
YELMQAPLQGKRPRATLRHDPRSLALAVMRFYRKYKKSAQ
>Mature_440_residues
MIRSRRAVSWLLPGLVVKRWLLTSGLGLLMALLGAAIWADLKPIYWIIETLVWLLGTITTVLPRSITGPLVVLIGAALVL
WGQSRSFGSIQQALAPDKDTVLVDALRAKSKLNRGPNIVAIGGGTGLSTLLSGLKRYSSNITAIVTVADDGGSSGVLRRE
LGVQPPGDIRNCLAALSTEEPLLTRLFQYRFSAGSGLEGHSFGNLFLSALSAITGNLETAITASSRVLAVQGQVVPATNA
DVQLWAELENGQRIEGESAIGKAPSPIVRLGCLPAQPPALPRALEAISNADLILLGPGSLYTSLLPNLLVPALVRTIQQS
RAPKLYICNLMTQPGETDGLDVVGHLRAIEAQLASLGISQKLFNAVLAQDDLGESQLVKHYQARGAEPVNCDAQALIAKG
YELMQAPLQGKRPRATLRHDPRSLALAVMRFYRKYKKSAQ

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=224, Percent_Identity=40.1785714285714, Blast_Score=142, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 46970; Mature: 46970

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSRRAVSWLLPGLVVKRWLLTSGLGLLMALLGAAIWADLKPIYWIIETLVWLLGTITT
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VLPRSITGPLVVLIGAALVLWGQSRSFGSIQQALAPDKDTVLVDALRAKSKLNRGPNIVA
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEE
IGGGTGLSTLLSGLKRYSSNITAIVTVADDGGSSGVLRRELGVQPPGDIRNCLAALSTEE
EECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCC
PLLTRLFQYRFSAGSGLEGHSFGNLFLSALSAITGNLETAITASSRVLAVQGQVVPATNA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCEEEEEECEEEECCCC
DVQLWAELENGQRIEGESAIGKAPSPIVRLGCLPAQPPALPRALEAISNADLILLGPGSL
CEEEEEECCCCCEECCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHCCCCEEEECCCHH
YTSLLPNLLVPALVRTIQQSRAPKLYICNLMTQPGETDGLDVVGHLRAIEAQLASLGISQ
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
KLFNAVLAQDDLGESQLVKHYQARGAEPVNCDAQALIAKGYELMQAPLQGKRPRATLRHD
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCC
PRSLALAVMRFYRKYKKSAQ
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSRRAVSWLLPGLVVKRWLLTSGLGLLMALLGAAIWADLKPIYWIIETLVWLLGTITT
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VLPRSITGPLVVLIGAALVLWGQSRSFGSIQQALAPDKDTVLVDALRAKSKLNRGPNIVA
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEE
IGGGTGLSTLLSGLKRYSSNITAIVTVADDGGSSGVLRRELGVQPPGDIRNCLAALSTEE
EECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCC
PLLTRLFQYRFSAGSGLEGHSFGNLFLSALSAITGNLETAITASSRVLAVQGQVVPATNA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCEEEEEECEEEECCCC
DVQLWAELENGQRIEGESAIGKAPSPIVRLGCLPAQPPALPRALEAISNADLILLGPGSL
CEEEEEECCCCCEECCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHCCCCEEEECCCHH
YTSLLPNLLVPALVRTIQQSRAPKLYICNLMTQPGETDGLDVVGHLRAIEAQLASLGISQ
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
KLFNAVLAQDDLGESQLVKHYQARGAEPVNCDAQALIAKGYELMQAPLQGKRPRATLRHD
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCC
PRSLALAVMRFYRKYKKSAQ
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]