| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is dgoT [C]
Identifier: 33864140
GI number: 33864140
Start: 1979880
End: 1981094
Strand: Reverse
Name: dgoT [C]
Synonym: PMT1873
Alternate gene names: 33864140
Gene position: 1981094-1979880 (Counterclockwise)
Preceding gene: 33864141
Following gene: 33864137
Centisome position: 82.17
GC content: 56.21
Gene sequence:
>1215_bases ATGCGCGATCGCTTGCTTTGGATCCTCAGCCTGCTCTTCGTGGCCTGGATGGTTTGGTCTGAAACGAGCTTTCAATATTT CGATCAATCGCTCGCTGATGAGCTTGCTCTCTCCTCTGCTGATGTTGCCGTTGTGGGGGGAGCCTTCCTGCTGCCCTATG GCCTCGTTCAGATTCCTGTCGGTTGGGTGTTGGATCGTGGCCGTGCCGAACGTTGGCTGTTACTCGGCGCCATCACGGCT ACTGCACTGACTTTGGCCTTCGCTCGAGCTGAAACCCTTGATGGCTTGATCATCAGCCGCGCTGGCATGGGTCTTGCTTG TGCTGTTGCCTTCCCGGCCTCAGGGCTGCTTGCGAGGCGAACCCTGCCGCCGCAGCGTTTTGCCTTGGCGATGGGTGCTA CCGACAGCCTGCTTGGTTTTGGCGCCGCCTTGGCTGCCTTGATGCCTGTCTTGATCCATTTGGGCTCCTGGCGGCAGCAG GTGACGTTGCAGATCATGGTGCTGGCTTTGCTGGTGGCAACACCGTTAGTTGTCGTGGTTGTTGCCAGCTCGCAGCAGAG TCGTGCAAAGCCAAGCCAATCGATCCGCGAACGCCAAGTTGCTGATCATTCAGGGCGCTGGAGTGCCGATGCCATCAAGA AGGTTGTTCATGCGGCCTTGATTTATGCCTGGGGTGCTGGAACTCTTTTTGGCTTTTGTCAATATGGCTTGCTGTCCGAG GTTGAGGGGTGGAGCGGTTCCCTCAAGGTGGGCGTGGGCATGGTTCTTTCCCTCTTTACATCCGTAGGAATGCTTGGGGC AGGTTGGCTTGGCAGTCATCAGTCCAGGCGTGCTCCCATCTTGTTGGCGGGCAGCTGCAGCGCCGCCGCCGCTCTGCTGG TCTTGGTGGCGACCAACCCTCAATCCGTCATCGTTTTGATTTTGGCTGGAGCCATTCTTGGTCTGGGCCTTGGTACGAGT GTTTTGGCTTTTCCTCTTGCAGAAGCTGAAGCTCCTCCAGCTCAAACGGCTCTTGTTGTCGCTTTTGTGAATACAGCAGG CACGTTGATGGGAGCGTTGATGATCATGCTCTCTGGGGTATTGCTGCAGGTATCGACCCCTGGCAATACAACTCTGGTGG TGTTGACCTACGGCAGCCTTGCTTTGTTGGGGATCATTTTGGCTGCCTTGCTTCAGATCAACACCATCAAGCGATCTGCT CAATTCCTTAGTTGA
Upstream 100 bases:
>100_bases CAGCCGCGCCAGTCGCTCACGCTGAATCTCGATTACTGCTTGTCTTGAAGACAAACAGATTCGCAGCCAATACATTTTCC TGGATGTCTTCAATGACTTG
Downstream 100 bases:
>100_bases GAGTGGATTGATTGTTTAGCGATTCGGTGGTCTCGCGTTTAGGGCTTGTTTTGTTTGTGGAGCAGTTCTTGCAGGGCTGG ATCTAACAGGGCAAAGGCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Transporter MFS Family Protein
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRDRLLWILSLLFVAWMVWSETSFQYFDQSLADELALSSADVAVVGGAFLLPYGLVQIPVGWVLDRGRAERWLLLGAITA TALTLAFARAETLDGLIISRAGMGLACAVAFPASGLLARRTLPPQRFALAMGATDSLLGFGAALAALMPVLIHLGSWRQQ VTLQIMVLALLVATPLVVVVVASSQQSRAKPSQSIRERQVADHSGRWSADAIKKVVHAALIYAWGAGTLFGFCQYGLLSE VEGWSGSLKVGVGMVLSLFTSVGMLGAGWLGSHQSRRAPILLAGSCSAAAALLVLVATNPQSVIVLILAGAILGLGLGTS VLAFPLAEAEAPPAQTALVVAFVNTAGTLMGALMIMLSGVLLQVSTPGNTTLVVLTYGSLALLGIILAALLQINTIKRSA QFLS
Sequences:
>Translated_404_residues MRDRLLWILSLLFVAWMVWSETSFQYFDQSLADELALSSADVAVVGGAFLLPYGLVQIPVGWVLDRGRAERWLLLGAITA TALTLAFARAETLDGLIISRAGMGLACAVAFPASGLLARRTLPPQRFALAMGATDSLLGFGAALAALMPVLIHLGSWRQQ VTLQIMVLALLVATPLVVVVVASSQQSRAKPSQSIRERQVADHSGRWSADAIKKVVHAALIYAWGAGTLFGFCQYGLLSE VEGWSGSLKVGVGMVLSLFTSVGMLGAGWLGSHQSRRAPILLAGSCSAAAALLVLVATNPQSVIVLILAGAILGLGLGTS VLAFPLAEAEAPPAQTALVVAFVNTAGTLMGALMIMLSGVLLQVSTPGNTTLVVLTYGSLALLGIILAALLQINTIKRSA QFLS >Mature_404_residues MRDRLLWILSLLFVAWMVWSETSFQYFDQSLADELALSSADVAVVGGAFLLPYGLVQIPVGWVLDRGRAERWLLLGAITA TALTLAFARAETLDGLIISRAGMGLACAVAFPASGLLARRTLPPQRFALAMGATDSLLGFGAALAALMPVLIHLGSWRQQ VTLQIMVLALLVATPLVVVVVASSQQSRAKPSQSIRERQVADHSGRWSADAIKKVVHAALIYAWGAGTLFGFCQYGLLSE VEGWSGSLKVGVGMVLSLFTSVGMLGAGWLGSHQSRRAPILLAGSCSAAAALLVLVATNPQSVIVLILAGAILGLGLGTS VLAFPLAEAEAPPAQTALVVAFVNTAGTLMGALMIMLSGVLLQVSTPGNTTLVVLTYGSLALLGIILAALLQINTIKRSA QFLS
Specific function: Intake Of Galactonate Into The Cell. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42212; Mature: 42212
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRLLWILSLLFVAWMVWSETSFQYFDQSLADELALSSADVAVVGGAFLLPYGLVQIPV CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCH GWVLDRGRAERWLLLGAITATALTLAFARAETLDGLIISRAGMGLACAVAFPASGLLARR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCCCCHHHHC TLPPQRFALAMGATDSLLGFGAALAALMPVLIHLGSWRQQVTLQIMVLALLVATPLVVVV CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEE VASSQQSRAKPSQSIRERQVADHSGRWSADAIKKVVHAALIYAWGAGTLFGFCQYGLLSE EECCCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VEGWSGSLKVGVGMVLSLFTSVGMLGAGWLGSHQSRRAPILLAGSCSAAAALLVLVATNP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHEEEEEECCC QSVIVLILAGAILGLGLGTSVLAFPLAEAEAPPAQTALVVAFVNTAGTLMGALMIMLSGV HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHCCC LLQVSTPGNTTLVVLTYGSLALLGIILAALLQINTIKRSAQFLS EEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRDRLLWILSLLFVAWMVWSETSFQYFDQSLADELALSSADVAVVGGAFLLPYGLVQIPV CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCH GWVLDRGRAERWLLLGAITATALTLAFARAETLDGLIISRAGMGLACAVAFPASGLLARR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCCCCHHHHC TLPPQRFALAMGATDSLLGFGAALAALMPVLIHLGSWRQQVTLQIMVLALLVATPLVVVV CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEE VASSQQSRAKPSQSIRERQVADHSGRWSADAIKKVVHAALIYAWGAGTLFGFCQYGLLSE EECCCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VEGWSGSLKVGVGMVLSLFTSVGMLGAGWLGSHQSRRAPILLAGSCSAAAALLVLVATNP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHEEEEEECCC QSVIVLILAGAILGLGLGTSVLAFPLAEAEAPPAQTALVVAFVNTAGTLMGALMIMLSGV HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHCCC LLQVSTPGNTTLVVLTYGSLALLGIILAALLQINTIKRSAQFLS EEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA