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The map label for this gene is dcd [H]

Identifier: 33864095

GI number: 33864095

Start: 1937387

End: 1937980

Strand: Reverse

Name: dcd [H]

Synonym: PMT1828

Alternate gene names: 33864095

Gene position: 1937980-1937387 (Counterclockwise)

Preceding gene: 33864096

Following gene: 33864094

Centisome position: 80.38

GC content: 49.49

Gene sequence:

>594_bases
ATGCTTAAAAACGATCGTTGGATCACCGAACAGGCCGCAGCAGGGATGCTTGAACCCTTTCAAGCCGGACTGATTCGACA
TCTTGATCCTGAGCAGCATCAACGGCCTGTACTCAGCTTTGGCTGTTCTTCCTTTGGTTATGACCTAAGGCTCTCTGCGA
AGGAGTTTTTGATCTTTCGCCATGTACCAGGCACGGTGATGAATCCGAAGCGATTTAATCCTGCAAATCTCGAATCCACC
CCTTTGCATCAGGACGAGGATGGCGAGTATTTCATCCTGCCGGCTCATTCTTATGGTCTCGGTGTGGCGCTGGAGAAGAT
GAAGGTCCCATCAAATATCACTGTCATTTGCCTAGGTAAGAGTACCTATGCCCGCCTTGGTATTATCGTTAATACAACTC
CCGCCGAAGCCAGTTGGGAAGGGCATCTCACGCTTGAATTCAGCAATAGTTCTGGAGCTGATTGCCGTATCTATGCCAAT
GAAGGCATTTGTCAGCTTCTTTTCTTCGAGGGTGATCCCTGCGATACCACCTACAGCGATCGCCAGGGTAAATATCAACA
TCAGCCAGAACGCGTCACTCTCGCCAGGATTTGA

Upstream 100 bases:

>100_bases
AGCGCCCCGGCTCGATGGATGTCATCTTGACTGGCTCAGTCATGCCATCGATCCTGATGGCAATGGCTGATCAGGTCACT
GAGTTGCGTCGTGGTTTCTA

Downstream 100 bases:

>100_bases
ACGAAAAAGATCTGTTGAATGCATGTCTGCTCTCAACAGATCTTTTTGATTTTGTAGACATTGATAGAGTGAAGCTACTG
ATCTCATCCCCCACGTATGT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLKNDRWITEQAAAGMLEPFQAGLIRHLDPEQHQRPVLSFGCSSFGYDLRLSAKEFLIFRHVPGTVMNPKRFNPANLEST
PLHQDEDGEYFILPAHSYGLGVALEKMKVPSNITVICLGKSTYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYAN
EGICQLLFFEGDPCDTTYSDRQGKYQHQPERVTLARI

Sequences:

>Translated_197_residues
MLKNDRWITEQAAAGMLEPFQAGLIRHLDPEQHQRPVLSFGCSSFGYDLRLSAKEFLIFRHVPGTVMNPKRFNPANLEST
PLHQDEDGEYFILPAHSYGLGVALEKMKVPSNITVICLGKSTYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYAN
EGICQLLFFEGDPCDTTYSDRQGKYQHQPERVTLARI
>Mature_197_residues
MLKNDRWITEQAAAGMLEPFQAGLIRHLDPEQHQRPVLSFGCSSFGYDLRLSAKEFLIFRHVPGTVMNPKRFNPANLEST
PLHQDEDGEYFILPAHSYGLGVALEKMKVPSNITVICLGKSTYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYAN
EGICQLLFFEGDPCDTTYSDRQGKYQHQPERVTLARI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 22091; Mature: 22091

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNDRWITEQAAAGMLEPFQAGLIRHLDPEQHQRPVLSFGCSSFGYDLRLSAKEFLIFR
CCCCCCEECHHHHCCCCCHHHHHHHHCCCCHHHCCCEEEECCCCCCCEEEECCEEEEEEE
HVPGTVMNPKRFNPANLESTPLHQDEDGEYFILPAHSYGLGVALEKMKVPSNITVICLGK
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECC
STYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYANEGICQLLFFEGDPCDTTYSD
CCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
RQGKYQHQPERVTLARI
CCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLKNDRWITEQAAAGMLEPFQAGLIRHLDPEQHQRPVLSFGCSSFGYDLRLSAKEFLIFR
CCCCCCEECHHHHCCCCCHHHHHHHHCCCCHHHCCCEEEECCCCCCCEEEECCEEEEEEE
HVPGTVMNPKRFNPANLESTPLHQDEDGEYFILPAHSYGLGVALEKMKVPSNITVICLGK
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECC
STYARLGIIVNTTPAEASWEGHLTLEFSNSSGADCRIYANEGICQLLFFEGDPCDTTYSD
CCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
RQGKYQHQPERVTLARI
CCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA