| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864092
Identifier: 33864092
GI number: 33864092
Start: 1934928
End: 1935422
Strand: Reverse
Name: 33864092
Synonym: PMT1825
Alternate gene names: NA
Gene position: 1935422-1934928 (Counterclockwise)
Preceding gene: 33864094
Following gene: 33864090
Centisome position: 80.28
GC content: 53.33
Gene sequence:
>495_bases ATGCTGCGTCTCCTCGTTGTGCCCTTTCGTGCCCCCTCGTTGCTGTTGCTCTTTGGGGTGGCGGTCGTTATGGGCAACCA TTGGTCGTTGCTTCAGTCTGAGCAGATAGACAGCCTCGGTATTGATGTTGAGCTCTTCTGGGTTGTTGAGCTCCTTCAGG CGGTCGTGTTGGTCGTGATTTGCACGATGCCGGATCTGATCTTGCGTCAGGTTTCCTTGCTGATGGCTGCCAGTCGTGCA ATCAGTTTGCTGGTGGTTTTGTTGTTGGTGATCACCGCTGGCCTGTACCTACTGCACCTGAGCCTGCTTGCGGATGTTCT CATCCTTGCTTCTGCGATATTGCTTGCGCGCTTGGATCTCACTCGCATTCGTGTGGTTCCACCACCGGTTGTGATGGCGA TTGCTCTGGGGTTGATTTTGCTTGGCGGGATATGGATTGGCCAGCAGATCTCTATGCCTTTACATCTCAGTCTCGCAAAG CTTTTTGCTGGATAG
Upstream 100 bases:
>100_bases GATGCACTTTGGCAGGTCTGTTTTGTTGTTGTTGCTCGCTTCAATGGGCTAACTGGTCAGAAGTGAAGCGTCTTTTCACC ATTCGTTGAGGCTGATGCAG
Downstream 100 bases:
>100_bases GCCTAAATAGCTCCAGAGGTTGCCGAGAACTTTTTTTGTATACAGGCGTGTCTCTGGGTAAGGGATTCGTTCTACCCAGA GCTCAGGGTCCGCAGCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLRLLVVPFRAPSLLLLFGVAVVMGNHWSLLQSEQIDSLGIDVELFWVVELLQAVVLVVICTMPDLILRQVSLLMAASRA ISLLVVLLLVITAGLYLLHLSLLADVLILASAILLARLDLTRIRVVPPPVVMAIALGLILLGGIWIGQQISMPLHLSLAK LFAG
Sequences:
>Translated_164_residues MLRLLVVPFRAPSLLLLFGVAVVMGNHWSLLQSEQIDSLGIDVELFWVVELLQAVVLVVICTMPDLILRQVSLLMAASRA ISLLVVLLLVITAGLYLLHLSLLADVLILASAILLARLDLTRIRVVPPPVVMAIALGLILLGGIWIGQQISMPLHLSLAK LFAG >Mature_164_residues MLRLLVVPFRAPSLLLLFGVAVVMGNHWSLLQSEQIDSLGIDVELFWVVELLQAVVLVVICTMPDLILRQVSLLMAASRA ISLLVVLLLVITAGLYLLHLSLLADVLILASAILLARLDLTRIRVVPPPVVMAIALGLILLGGIWIGQQISMPLHLSLAK LFAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17750; Mature: 17750
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLLVVPFRAPSLLLLFGVAVVMGNHWSLLQSEQIDSLGIDVELFWVVELLQAVVLVVI CCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH CTMPDLILRQVSLLMAASRAISLLVVLLLVITAGLYLLHLSLLADVLILASAILLARLDL HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRIRVVPPPVVMAIALGLILLGGIWIGQQISMPLHLSLAKLFAG HHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MLRLLVVPFRAPSLLLLFGVAVVMGNHWSLLQSEQIDSLGIDVELFWVVELLQAVVLVVI CCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH CTMPDLILRQVSLLMAASRAISLLVVLLLVITAGLYLLHLSLLADVLILASAILLARLDL HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRIRVVPPPVVMAIALGLILLGGIWIGQQISMPLHLSLAKLFAG HHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA