| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864063
Identifier: 33864063
GI number: 33864063
Start: 1897562
End: 1898383
Strand: Reverse
Name: 33864063
Synonym: PMT1796
Alternate gene names: NA
Gene position: 1898383-1897562 (Counterclockwise)
Preceding gene: 33864064
Following gene: 33864061
Centisome position: 78.74
GC content: 54.01
Gene sequence:
>822_bases ATGTCTCAGCTAACCATCAAGCTAAGCGTTAAAGCCGATGCTTTGATCGCACAGCTTCAGAAGGAGATCTTTAATCGTCG CCGTAAGAAGGTCAGTGCAGCTGGAGTGGTGGAAACCTTGGTTGAAAGCGGTGCCAAGTCTCAGTCCGACAAGCGCTTTG CGACTTCCTGGACCAATTTGATCAAGGACATCGAAAAGGCTGCCAAGCTTGCCAATACACATGGCAGCAAGCCTTCAAAT CTCACTGCTGATGAGTGGGCCATGGTGCTGACTCATCGCAGTCGAGGTCCAGGTAAATCACCGAGTAAGACTCCTGCAAA GAAGGTGTCTAGTGGAAAGTCCGCAGAGAAATCCAGTACGACTAAAGCTTCGACGACCAAAGCCCCCGCAAGGAAGGCTT CGACGACCAAAGCCTCTGCAAGGAAGGCTTCGACGACCAAAGCCTCTGCAAGGAAGGCTTCGACGACCAAAGCCCCTGCA AAGAAAGCCTCTGCCGCCAAAGCCCCTGCAAAGAAAGCCTCTGCTGCTAAAGCCCCTGCAAAGAAAGCCTCTGCTGTTAA AGCCCCTGCAAAGAAAGCCTCTGCTGTTAAAGCCCCCGCGAAGAAAACCTCTGCTGCCAAGGCCTCCGCGAAGAAGTCTT CCAGCACATCAGTTGGCACGTCGCGACCAGCTCGTCGTGCACGCAAAGCTAGTGGGAGCAAAAGTCTTGTTGCCTCCACG TCTGTAGCAAAACGCATGGCGAAGGCCGCTGGTCGTCTCGGGACCTCTGTCGTTAGCTCGGCGGTTGGCGCCAACGGTAG CGTTCCATTAGCGCTCAAATGA
Upstream 100 bases:
>100_bases TTGCAGGCTTATTTGAAGCCTCCAGCAACGACAGCTTAACTTCGACTATTTGTTGACATTCGATCGAGATGCTACATATA AGATAGCTATTTATTCTTCA
Downstream 100 bases:
>100_bases GCACTTGATGCTTGGAGGTGACTGGTTGGTCCAGTGCCTCCGTTTCGTTTTTTAAGGCCTCGGGCGAATGGGTAAAAACC AACGGTTTTGCCAGTCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNLIKDIEKAAKLANTHGSKPSN LTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKASARKASTTKASARKASTTKAPA KKASAAKAPAKKASAAKAPAKKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK
Sequences:
>Translated_273_residues MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNLIKDIEKAAKLANTHGSKPSN LTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKASARKASTTKASARKASTTKAPA KKASAAKAPAKKASAAKAPAKKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK >Mature_272_residues SQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNLIKDIEKAAKLANTHGSKPSNL TADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKASARKASTTKASARKASTTKAPAK KASAAKAPAKKASAAKAPAKKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVASTS VAKRMAKAAGRLGTSVVSSAVGANGSVPLALK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27774; Mature: 27643
Theoretical pI: Translated: 12.27; Mature: 12.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNL CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKDIEKAAKLANTHGSKPSNLTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSST HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCC TKASTTKAPARKASTTKASARKASTTKASARKASTTKAPAKKASAAKAPAKKASAAKAPA CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCH KKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHH SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC >Mature Secondary Structure SQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKDIEKAAKLANTHGSKPSNLTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSST HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCC TKASTTKAPARKASTTKASARKASTTKASARKASTTKAPAKKASAAKAPAKKASAAKAPA CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCH KKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHH SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA