Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33864063

Identifier: 33864063

GI number: 33864063

Start: 1897562

End: 1898383

Strand: Reverse

Name: 33864063

Synonym: PMT1796

Alternate gene names: NA

Gene position: 1898383-1897562 (Counterclockwise)

Preceding gene: 33864064

Following gene: 33864061

Centisome position: 78.74

GC content: 54.01

Gene sequence:

>822_bases
ATGTCTCAGCTAACCATCAAGCTAAGCGTTAAAGCCGATGCTTTGATCGCACAGCTTCAGAAGGAGATCTTTAATCGTCG
CCGTAAGAAGGTCAGTGCAGCTGGAGTGGTGGAAACCTTGGTTGAAAGCGGTGCCAAGTCTCAGTCCGACAAGCGCTTTG
CGACTTCCTGGACCAATTTGATCAAGGACATCGAAAAGGCTGCCAAGCTTGCCAATACACATGGCAGCAAGCCTTCAAAT
CTCACTGCTGATGAGTGGGCCATGGTGCTGACTCATCGCAGTCGAGGTCCAGGTAAATCACCGAGTAAGACTCCTGCAAA
GAAGGTGTCTAGTGGAAAGTCCGCAGAGAAATCCAGTACGACTAAAGCTTCGACGACCAAAGCCCCCGCAAGGAAGGCTT
CGACGACCAAAGCCTCTGCAAGGAAGGCTTCGACGACCAAAGCCTCTGCAAGGAAGGCTTCGACGACCAAAGCCCCTGCA
AAGAAAGCCTCTGCCGCCAAAGCCCCTGCAAAGAAAGCCTCTGCTGCTAAAGCCCCTGCAAAGAAAGCCTCTGCTGTTAA
AGCCCCTGCAAAGAAAGCCTCTGCTGTTAAAGCCCCCGCGAAGAAAACCTCTGCTGCCAAGGCCTCCGCGAAGAAGTCTT
CCAGCACATCAGTTGGCACGTCGCGACCAGCTCGTCGTGCACGCAAAGCTAGTGGGAGCAAAAGTCTTGTTGCCTCCACG
TCTGTAGCAAAACGCATGGCGAAGGCCGCTGGTCGTCTCGGGACCTCTGTCGTTAGCTCGGCGGTTGGCGCCAACGGTAG
CGTTCCATTAGCGCTCAAATGA

Upstream 100 bases:

>100_bases
TTGCAGGCTTATTTGAAGCCTCCAGCAACGACAGCTTAACTTCGACTATTTGTTGACATTCGATCGAGATGCTACATATA
AGATAGCTATTTATTCTTCA

Downstream 100 bases:

>100_bases
GCACTTGATGCTTGGAGGTGACTGGTTGGTCCAGTGCCTCCGTTTCGTTTTTTAAGGCCTCGGGCGAATGGGTAAAAACC
AACGGTTTTGCCAGTCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNLIKDIEKAAKLANTHGSKPSN
LTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKASARKASTTKASARKASTTKAPA
KKASAAKAPAKKASAAKAPAKKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST
SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK

Sequences:

>Translated_273_residues
MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNLIKDIEKAAKLANTHGSKPSN
LTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKASARKASTTKASARKASTTKAPA
KKASAAKAPAKKASAAKAPAKKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST
SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK
>Mature_272_residues
SQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNLIKDIEKAAKLANTHGSKPSNL
TADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKASARKASTTKASARKASTTKAPAK
KASAAKAPAKKASAAKAPAKKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVASTS
VAKRMAKAAGRLGTSVVSSAVGANGSVPLALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27774; Mature: 27643

Theoretical pI: Translated: 12.27; Mature: 12.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNL
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IKDIEKAAKLANTHGSKPSNLTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSST
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCC
TKASTTKAPARKASTTKASARKASTTKASARKASTTKAPAKKASAAKAPAKKASAAKAPA
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCH
KKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST
HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
>Mature Secondary Structure 
SQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWTNL
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IKDIEKAAKLANTHGSKPSNLTADEWAMVLTHRSRGPGKSPSKTPAKKVSSGKSAEKSST
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCC
TKASTTKAPARKASTTKASARKASTTKASARKASTTKAPAKKASAAKAPAKKASAAKAPA
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCH
KKASAVKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSLVAST
HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
SVAKRMAKAAGRLGTSVVSSAVGANGSVPLALK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA