| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is psaA [H]
Identifier: 33864037
GI number: 33864037
Start: 1862042
End: 1864372
Strand: Reverse
Name: psaA [H]
Synonym: PMT1770
Alternate gene names: 33864037
Gene position: 1864372-1862042 (Counterclockwise)
Preceding gene: 33864040
Following gene: 33864036
Centisome position: 77.33
GC content: 53.02
Gene sequence:
>2331_bases ATGACCATCAGCCCACCAGAGCGTGGGGAAAAAGCGAAGCCCATTTACGATCAACCAGTCGACCGGGACCACGTTCCAGC CGACTTTGAAAAATTCGAACAACCCGGATTTTTCTCGAAAAGCCTCGCTAAAGGACCAAACTCCACAACCTGGATTTGGA ACCTCCACGCTGACGCCCACGACTTCGATACCCACATTGGGGATCTGGAAGAAACCAGCCGGAAGATCTTTTCGGCGCAC TTCGGCCATTTGGCCATAGTGTTTATCTGGATGAGCGGTGCCTTCTTCCACGGTGCCCGCTTCTCCAACTACTCCGGCTG GCTAGCCGACCCCACGCACGTGAAAGCAAGTGCGCAGGTCGTTTGGCCAATCGTCGGTCAAGAAATCATGAATGCTGATA TGGGTGCCGGTTTTAACGGCATTCAGATCACCTCCGGCATTTTCCAAATGTGGAGGGCCTGGGGCATCACCAGTGAGACG GAGCTCATGGCTCTGGCAACTGGTGCCCTAATCATGGCTGCCCTGGTACTCCATGGCGGAATCTTCCACTACCACAAAGC AGCTCCAAAGCTGGAGTGGTTTAAGAAGATTGAGTCGATGCTTCAGCACCATCAGATTGGTCTGTTTGGCTTGGGCTCTC TTGGTTGGACAGGTCACTTGATCCATGTGGCCAACCCCACCAACGCCCTTTTGGATGCCATAGATGCAGGCACTCCAATG GTGCTTGATGGCAAGACCATCGCCACTGCAGCGGATATCCCTCTGCCACACGAGCTCTACAACGCTGATCTCGTTGGCCA GATTTATCCAGGTCTTGCTTCAGGCGTCGGGAATTTCTTCTCGGCTAATTGGTGGGCCTTTAGTGATTTTCTCACCAACA ACGGAGGAGTGAATCCTGTAACTGGTGCTCTATGGAGTACTGATGTTGCTCATCACCATTTGGCATGGGCGGTCTTTTTG ATGTTTGGAGGTCATGTATACCGCTCAAGATTCGGTATCGGCCACAGCATGAAAGAGATCATGGGGAACGTAAAGGGTGA CCCCCTGTTATTCCCAGCTCCCAATGGTCACAAAGGTCTCTTTGAGTTCCTATCCAATAGCTGGCATGCTCAGCTGGCAG TGAACTTGGCCTGCATTGGTTCAGGAAGCATCGTGGTTGCACACCACATGTATTCTCTGCCTCCATATCCATACCTAGCG ACTGATTACCCAACGGTTCTTGGGCTATTCACACACCACATGTGGATTGGTGGCTTGATGATTTGCGGAGCAGCCGCTCA CGCTGGCATCGCAGTCATTCGTGACTATGACGTCTCAGTGCACGTCGATAACGTGCTTGACCGCATGTTCAAGGCGCGGG ACGCCATTATCAGTCACCTCAACTGGGTGTGTATGTTCCTTGGCTTCCATAGCTTCGGCCTTTATATACACAACGACAGC ATGCGTGCTTTGGGTCGTTCCCAAGACATGTTCAGCGACTCTGCAATCCAGTTGCAGCCTGTCTTAGCTCAGTGGATCCA AAGCCTTTGGGCGTCTTCAATTGGCACATCAGCTGTGGTTGGCACGACTACAGGTCTGCCAGGTGCAGTTAGTGATGTGT TCAACGGAAGTGTTGTAGCAGTAGGCGGCAAGGTGGCTCTGATGGCTATTCCCTTGGGAACAGCCGACTTGATGATTCAC CACATCCATGCCTTCACCATTCACGTAACTTGCCTCATCCTTCTCAAGGGTGTGCTTTTTGCCCGCAGTTCCCGTCTTGT TCCTGACAAGGCAAATCTTGGCTTCCGCTTCTCTTGCGATGGCCCAGGTCGTGGTGGTACCTGCCAGGTTTCCTCTTGGG ACCACGTGTTCCTAGGCCTGTTCTGGATGTACAACTCCCTCTCGATGGTGATCTTCTACTTCTCGTGGAAGATGCAAAGC GATGTATGGGGCACTGTTAATTCAGACGGGAGTGTGACTCATCTCGTTTCTGGCAACTTTGCTCAAAGCGCCATCACTGT GAATGGTTGGTTCCGTGACTTCCTCTGGGCTCAGTCCTCACAGGTGCTCACGAGCTACGGCACTGGCCTCAGCGGCTATG GCCTGCTATTCCTTGGTGGCCACTTCGTGTGGGCCTTTAGCTTGATGTTCTTGTTCAGCGGCCGTGGCTACTGGCAGGAG CTATTTGAATCCATTATCTGGGCTCATAACAAGCTCAAGCTTGCTCCCACCATCCAGCCCCGGGCACTTTCGATTACGCA GGGCCGCGCAGTTGGTGTAACCCACTTCCTGTTTGGTGGCATTGTGACCACCTGGGCCTTCTTCCATGCCCGCCTTCTTG GGCTCGGCTGA
Upstream 100 bases:
>100_bases GCACCACTTCGGTGGTGGTGTCTCCGGGGCCCCGGCAAGCCCATGGGCCTGTCGAAGGGGTGGACCTCCACCTCGATCCC GTCCCTCGAGGAACCTCTCG
Downstream 100 bases:
>100_bases CCTTTCCTGACCTTTCCCCACATGGCAACGAAATTTCCTTCGTTCAGCCAGGGTCTGGCACAGGACCCTACAACCCGCCG TATTTGGTACGGCATAGCCA
Product: photosystem I P700 chlorophyll a apoprotein A1
Products: NA
Alternate protein names: PsaA [H]
Number of amino acids: Translated: 776; Mature: 775
Protein sequence:
>776_residues MTISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAHDFDTHIGDLEETSRKIFSAH FGHLAIVFIWMSGAFFHGARFSNYSGWLADPTHVKASAQVVWPIVGQEIMNADMGAGFNGIQITSGIFQMWRAWGITSET ELMALATGALIMAALVLHGGIFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGVGNFFSANWWAFSDFLTNNGGVNPVTGALWSTDVAHHHLAWAVFL MFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGLFEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLA TDYPTVLGLFTHHMWIGGLMICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSAVVGTTTGLPGAVSDVFNGSVVAVGGKVALMAIPLGTADLMIH HIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCDGPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQS DVWGTVNSDGSVTHLVSGNFAQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG
Sequences:
>Translated_776_residues MTISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAHDFDTHIGDLEETSRKIFSAH FGHLAIVFIWMSGAFFHGARFSNYSGWLADPTHVKASAQVVWPIVGQEIMNADMGAGFNGIQITSGIFQMWRAWGITSET ELMALATGALIMAALVLHGGIFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGVGNFFSANWWAFSDFLTNNGGVNPVTGALWSTDVAHHHLAWAVFL MFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGLFEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLA TDYPTVLGLFTHHMWIGGLMICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSAVVGTTTGLPGAVSDVFNGSVVAVGGKVALMAIPLGTADLMIH HIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCDGPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQS DVWGTVNSDGSVTHLVSGNFAQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG >Mature_775_residues TISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAHDFDTHIGDLEETSRKIFSAHF GHLAIVFIWMSGAFFHGARFSNYSGWLADPTHVKASAQVVWPIVGQEIMNADMGAGFNGIQITSGIFQMWRAWGITSETE LMALATGALIMAALVLHGGIFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPMV LDGKTIATAADIPLPHELYNADLVGQIYPGLASGVGNFFSANWWAFSDFLTNNGGVNPVTGALWSTDVAHHHLAWAVFLM FGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGLFEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLAT DYPTVLGLFTHHMWIGGLMICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDSM RALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSAVVGTTTGLPGAVSDVFNGSVVAVGGKVALMAIPLGTADLMIHH IHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCDGPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQSD VWGTVNSDGSVTHLVSGNFAQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQEL FESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG
Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaA/psaB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006243 - InterPro: IPR001280 - InterPro: IPR020586 [H]
Pfam domain/function: PF00223 PsaA_PsaB [H]
EC number: NA
Molecular weight: Translated: 84981; Mature: 84850
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00419 PHOTOSYSTEM_I_PSAAB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCC DFDTHIGDLEETSRKIFSAHFGHLAIVFIWMSGAFFHGARFSNYSGWLADPTHVKASAQV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEE VWPIVGQEIMNADMGAGFNGIQITSGIFQMWRAWGITSETELMALATGALIMAALVLHGG EEHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC IFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM HHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCE VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGVGNFFSANWWAFSDFLTNNGGVNPV EECCCEEEEECCCCCCHHHHCCCHHHHHCCHHHHHCCHHHCCCCEEEHHHHCCCCCCCCC TGALWSTDVAHHHLAWAVFLMFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCHHH FEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLATDYPTVLGLFTHHMWIGGLM HHHHCCCCEEEEEEEEEEECCCCEEEEEEHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH ICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS HHHHHHHCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSAVVGTTTGLPGAVSDVFNGSVVA HHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCEEE VGGKVALMAIPLGTADLMIHHIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCD ECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQSDVWGTVNSDGSVTHLVSGNF CCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCCCEEEEECCCC AQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE CCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHH LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG HHHHHHHCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAH CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCC DFDTHIGDLEETSRKIFSAHFGHLAIVFIWMSGAFFHGARFSNYSGWLADPTHVKASAQV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEE VWPIVGQEIMNADMGAGFNGIQITSGIFQMWRAWGITSETELMALATGALIMAALVLHGG EEHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC IFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM HHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCE VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGVGNFFSANWWAFSDFLTNNGGVNPV EECCCEEEEECCCCCCHHHHCCCHHHHHCCHHHHHCCHHHCCCCEEEHHHHCCCCCCCCC TGALWSTDVAHHHLAWAVFLMFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCHHH FEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLATDYPTVLGLFTHHMWIGGLM HHHHCCCCEEEEEEEEEEECCCCEEEEEEHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH ICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS HHHHHHHCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSAVVGTTTGLPGAVSDVFNGSVVA HHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCEEE VGGKVALMAIPLGTADLMIHHIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCD ECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQSDVWGTVNSDGSVTHLVSGNF CCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCCCEEEEECCCC AQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE CCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHH LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG HHHHHHHCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA