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The map label for this gene is 33864029

Identifier: 33864029

GI number: 33864029

Start: 1852321

End: 1852866

Strand: Reverse

Name: 33864029

Synonym: PMT1762

Alternate gene names: NA

Gene position: 1852866-1852321 (Counterclockwise)

Preceding gene: 33864031

Following gene: 33863998

Centisome position: 76.85

GC content: 54.58

Gene sequence:

>546_bases
ATGAGCCAGGTTCTCGTACTCAACGCGTCCTATGAGCCTCTGAATATCACCACCTGGCGACGCGCCCTGGTGATGATGTT
CAAGGGAAAGGCGGAGAGCCTGGAACAGGATTCTTCACGCATGGTTCGCGAGGACACCATGCTCCCTACGGTGATTCGGT
TGCGGCATTTTGTTCGGGTGCCTTTTCGGCAATTGCCCCTGACGCGTCGAAATGTGTTTTTTCGCGATGGTCATTGTTGC
CAATACTGCGGTTACCAAGGAGAGAAACTCTCCATAGATCATGTGATCCCTCGCAGCCGTGGCGGAAGCGATACCTGGGA
AAACGTCACCACGGCTTGCTTGATTTGCAATGTACGTAAGGGCAGCCGTACTCCTCAGGAGGCTGAAATGCCTCTGCATC
GGTTGCCGCGGCGACCACTCAGCAGTCTCAGTTTTGAGGCGACTCGACAGATTCACTCGGGCCGACACAGCGAGTGGGAA
AAGTATGTAATCGGCTGGGGCTCTGGTGATACCAGCCTCAATGTCAGTCTTCCTCCTGATGACTGA

Upstream 100 bases:

>100_bases
ACCGTGTGGGGCGATCAGGTCTCGCATGCTGGCAGGGTAAACAAGGGAATCACCTCACCCTTGGAGTGTCGGTAGCATGG
CGCTTAATCAGGGGGCTGGC

Downstream 100 bases:

>100_bases
GTTCTTCCAGTTGATGGCGTTGCTCTTCGGCAATGCAGGCGCCGATCAGCTCTTCCAGCTGGCCAGTCAGCACTGGCTCG
AGGGAGAAATTGCGTCCTAA

Product: HNH endonuclease family protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSQVLVLNASYEPLNITTWRRALVMMFKGKAESLEQDSSRMVREDTMLPTVIRLRHFVRVPFRQLPLTRRNVFFRDGHCC
QYCGYQGEKLSIDHVIPRSRGGSDTWENVTTACLICNVRKGSRTPQEAEMPLHRLPRRPLSSLSFEATRQIHSGRHSEWE
KYVIGWGSGDTSLNVSLPPDD

Sequences:

>Translated_181_residues
MSQVLVLNASYEPLNITTWRRALVMMFKGKAESLEQDSSRMVREDTMLPTVIRLRHFVRVPFRQLPLTRRNVFFRDGHCC
QYCGYQGEKLSIDHVIPRSRGGSDTWENVTTACLICNVRKGSRTPQEAEMPLHRLPRRPLSSLSFEATRQIHSGRHSEWE
KYVIGWGSGDTSLNVSLPPDD
>Mature_180_residues
SQVLVLNASYEPLNITTWRRALVMMFKGKAESLEQDSSRMVREDTMLPTVIRLRHFVRVPFRQLPLTRRNVFFRDGHCCQ
YCGYQGEKLSIDHVIPRSRGGSDTWENVTTACLICNVRKGSRTPQEAEMPLHRLPRRPLSSLSFEATRQIHSGRHSEWEK
YVIGWGSGDTSLNVSLPPDD

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20831; Mature: 20700

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVLVLNASYEPLNITTWRRALVMMFKGKAESLEQDSSRMVREDTMLPTVIRLRHFVRV
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PFRQLPLTRRNVFFRDGHCCQYCGYQGEKLSIDHVIPRSRGGSDTWENVTTACLICNVRK
CHHHCCCCHHCEEEECCCCHHHCCCCCCEEEHHCCCCCCCCCCCHHHHHHEEHHEEECCC
GSRTPQEAEMPLHRLPRRPLSSLSFEATRQIHSGRHSEWEKYVIGWGSGDTSLNVSLPPD
CCCCCHHHCCCHHHCCCCCHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCC
D
C
>Mature Secondary Structure 
SQVLVLNASYEPLNITTWRRALVMMFKGKAESLEQDSSRMVREDTMLPTVIRLRHFVRV
CCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PFRQLPLTRRNVFFRDGHCCQYCGYQGEKLSIDHVIPRSRGGSDTWENVTTACLICNVRK
CHHHCCCCHHCEEEECCCCHHHCCCCCCEEEHHCCCCCCCCCCCHHHHHHEEHHEEECCC
GSRTPQEAEMPLHRLPRRPLSSLSFEATRQIHSGRHSEWEKYVIGWGSGDTSLNVSLPPD
CCCCCHHHCCCHHHCCCCCHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA