| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863981
Identifier: 33863981
GI number: 33863981
Start: 1816314
End: 1816796
Strand: Direct
Name: 33863981
Synonym: PMT1714
Alternate gene names: NA
Gene position: 1816314-1816796 (Clockwise)
Preceding gene: 33863980
Following gene: 33863982
Centisome position: 75.34
GC content: 51.14
Gene sequence:
>483_bases TTGCTGCAGGCATGCGCAACACCGGTTGAAACCACCTTGCTTGCCTTTCTTCAACAGCCCGAACTCCCCCCCGGCTTCCG GCTAGACCTTGAACAGCCACCCAATCCTCAAGCACTCAACAAACTTCTCGCTCGTTGCAGAGAAGCCACTCACACTTCAG AGCAATGGGCCCTGGCCTTTGAGCGAAGCGTTTGGCATCTAAGCATTATTGAACAAGAAAAAGGAACCCTGGTTGGTTTT GTGCGCGCCACAAGCGACCATGGCCTCAATGTCAACCTCTGGAATCTCGTCGCCCAACCCGGCTCATTACAAGCACAATT GCTTGCAGTTCTCGTACATCAAGCGCTTGACAATTTGCGCCGAATTCTGCCTGGTTGCAGCATCTCAATATTAGCACCTT CCATCTCCCTCAAAGCATTGCAGGCTCAAGGCTTCATTATTGATCCAGATGGAATAAGAGCGATGAGTTATCGACTCCGC TAA
Upstream 100 bases:
>100_bases CGTGATCAGAACCGGCAGCCACCCATGAACGATGCTGGCGATGGTCGCACTTACAGCCGCAGCGAACTGCTAAGAGGCGC ACTGCTCACCATTAACGGCA
Downstream 100 bases:
>100_bases GTCGTCGAGTCAACATCGTTATTGGATCCTTCCTGCAGTTCTCTGCCCATCTTTGCTTGACCGACTACAGCCTGAATTGA AATCAGCTCCTCAACTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLQACATPVETTLLAFLQQPELPPGFRLDLEQPPNPQALNKLLARCREATHTSEQWALAFERSVWHLSIIEQEKGTLVGF VRATSDHGLNVNLWNLVAQPGSLQAQLLAVLVHQALDNLRRILPGCSISILAPSISLKALQAQGFIIDPDGIRAMSYRLR
Sequences:
>Translated_160_residues MLQACATPVETTLLAFLQQPELPPGFRLDLEQPPNPQALNKLLARCREATHTSEQWALAFERSVWHLSIIEQEKGTLVGF VRATSDHGLNVNLWNLVAQPGSLQAQLLAVLVHQALDNLRRILPGCSISILAPSISLKALQAQGFIIDPDGIRAMSYRLR >Mature_160_residues MLQACATPVETTLLAFLQQPELPPGFRLDLEQPPNPQALNKLLARCREATHTSEQWALAFERSVWHLSIIEQEKGTLVGF VRATSDHGLNVNLWNLVAQPGSLQAQLLAVLVHQALDNLRRILPGCSISILAPSISLKALQAQGFIIDPDGIRAMSYRLR
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17680; Mature: 17680
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQACATPVETTLLAFLQQPELPPGFRLDLEQPPNPQALNKLLARCREATHTSEQWALAF CCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH ERSVWHLSIIEQEKGTLVGFVRATSDHGLNVNLWNLVAQPGSLQAQLLAVLVHQALDNLR HCCEEEEEEEECCCCCEEEEEEECCCCCCEEEHHHEECCCCCHHHHHHHHHHHHHHHHHH RILPGCSISILAPSISLKALQAQGFIIDPDGIRAMSYRLR HHCCCCCEEEECCCCEEEEEECCCEEECCCCCEEHEEECC >Mature Secondary Structure MLQACATPVETTLLAFLQQPELPPGFRLDLEQPPNPQALNKLLARCREATHTSEQWALAF CCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH ERSVWHLSIIEQEKGTLVGFVRATSDHGLNVNLWNLVAQPGSLQAQLLAVLVHQALDNLR HCCEEEEEEEECCCCCEEEEEEECCCCCCEEEHHHEECCCCCHHHHHHHHHHHHHHHHHH RILPGCSISILAPSISLKALQAQGFIIDPDGIRAMSYRLR HHCCCCCEEEECCCCEEEEEECCCEEECCCCCEEHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA