| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863959
Identifier: 33863959
GI number: 33863959
Start: 1795215
End: 1795853
Strand: Direct
Name: 33863959
Synonym: PMT1692
Alternate gene names: NA
Gene position: 1795215-1795853 (Clockwise)
Preceding gene: 33863958
Following gene: 33863960
Centisome position: 74.46
GC content: 55.87
Gene sequence:
>639_bases ATGCCCTTTGATAGCCCCCAGCGCATCACGCGTCGCCGTAGCTCAGCAGGACCTGTACCTCCAAGACGGCAAATCAATAG TGATTACGACGATCGCAACGCCCCCCATCGTCAAGGTCAGGGTCCTAGGCCAACCTTTTTAGCCCTGAGGGACCACGGCA AGGTTTATGTGGCAGACCTCCCCAATCTCTCTGACGGGCAACTGGTACACATCTGCAAAGAAGCTGAGGAAGTTCTTGAA AGCCTGGAGCGTCGCATCAGCGATCTCGAACGCGAAGCACACAACGGTTTCGGTGATAGCGACACCTTCATCAAGGCATC CACCAAACGAGATGTGACTCGTCGCTTCATCCGAGCCATCCAAGGTGAGCAAGAACATCGTCTCAGCAATCCAGCCCTAC GCAGTGCGGCCGCTGAATCTCTGCCTCGCACTTTCCTCGAGATCTCACGCCACCGCTTGCCTGGAGCAACTTTTGATTCA CTGCTTCAAGAAGCTTTGGCAGCCTGCGAGCTGAAGGAACTGGACTCCGACATTGCTCCAGAGGCACCCGTCAAGGTGGT CCCCATCCGCTCTACTGCAACCACTCTTCCGGTCGTGGTGACACCTGATCCAAATCTTCCCAGCTCAACCAGCGCCTAA
Upstream 100 bases:
>100_bases ATTCTCGAGCCGATTTTCAGGCACGTCCTCAAGTAATATTTACCTATGCACGCCGAGAGAATATTTCGGCAACAGCGTCG TTAGATCTAACTTAAATCCA
Downstream 100 bases:
>100_bases TAGGGGTTCATTACTCCAAATGGATTGCCGTCACTGGCTAAGTACTGCCAACCGAGCTAATCAAAAGACTATAGAAATTG CAACGTCTAGGTTGAGATGC
Product: Hpt domain-containing protein
Products: NA
Alternate protein names: Hpt Domain-Containing Protein
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPFDSPQRITRRRSSAGPVPPRRQINSDYDDRNAPHRQGQGPRPTFLALRDHGKVYVADLPNLSDGQLVHICKEAEEVLE SLERRISDLEREAHNGFGDSDTFIKASTKRDVTRRFIRAIQGEQEHRLSNPALRSAAAESLPRTFLEISRHRLPGATFDS LLQEALAACELKELDSDIAPEAPVKVVPIRSTATTLPVVVTPDPNLPSSTSA
Sequences:
>Translated_212_residues MPFDSPQRITRRRSSAGPVPPRRQINSDYDDRNAPHRQGQGPRPTFLALRDHGKVYVADLPNLSDGQLVHICKEAEEVLE SLERRISDLEREAHNGFGDSDTFIKASTKRDVTRRFIRAIQGEQEHRLSNPALRSAAAESLPRTFLEISRHRLPGATFDS LLQEALAACELKELDSDIAPEAPVKVVPIRSTATTLPVVVTPDPNLPSSTSA >Mature_211_residues PFDSPQRITRRRSSAGPVPPRRQINSDYDDRNAPHRQGQGPRPTFLALRDHGKVYVADLPNLSDGQLVHICKEAEEVLES LERRISDLEREAHNGFGDSDTFIKASTKRDVTRRFIRAIQGEQEHRLSNPALRSAAAESLPRTFLEISRHRLPGATFDSL LQEALAACELKELDSDIAPEAPVKVVPIRSTATTLPVVVTPDPNLPSSTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23502; Mature: 23370
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDSPQRITRRRSSAGPVPPRRQINSDYDDRNAPHRQGQGPRPTFLALRDHGKVYVADL CCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEC PNLSDGQLVHICKEAEEVLESLERRISDLEREAHNGFGDSDTFIKASTKRDVTRRFIRAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHH QGEQEHRLSNPALRSAAAESLPRTFLEISRHRLPGATFDSLLQEALAACELKELDSDIAP CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC EAPVKVVPIRSTATTLPVVVTPDPNLPSSTSA CCCEEEEEECCCCCEECEEECCCCCCCCCCCC >Mature Secondary Structure PFDSPQRITRRRSSAGPVPPRRQINSDYDDRNAPHRQGQGPRPTFLALRDHGKVYVADL CCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEC PNLSDGQLVHICKEAEEVLESLERRISDLEREAHNGFGDSDTFIKASTKRDVTRRFIRAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHH QGEQEHRLSNPALRSAAAESLPRTFLEISRHRLPGATFDSLLQEALAACELKELDSDIAP CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC EAPVKVVPIRSTATTLPVVVTPDPNLPSSTSA CCCEEEEEECCCCCEECEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA