| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is mpeV [H]
Identifier: 33863947
GI number: 33863947
Start: 1784813
End: 1785733
Strand: Direct
Name: mpeV [H]
Synonym: PMT1680
Alternate gene names: 33863947
Gene position: 1784813-1785733 (Clockwise)
Preceding gene: 33863945
Following gene: 33863951
Centisome position: 74.03
GC content: 52.01
Gene sequence:
>921_bases TTGACACAGGACCACCCCTTCAGCATCAATACTGACGAGTCGTTGCTGAATGAAGACGAAGCCGCTGAACTGGCCGATGA ATTAAAGGCCATGCTCAGACGTGGAGACACGCCGAAAGCCGATGCAGAGCAAATTCAGCGCATGGTGTCTGGTCTTGGCG ATCATCGAGGATTGCTTCGACGTACGTTTGCAGAAAGTCTCGGCGTCGTAGGCAAGGCCGCGGTGCCAGCACTTTGTGTG GCCCTACACAAGCATTCCAGTGCCACGGTTAGGCGCGCCGCCGCAAAGACCCTCAAACTAGTTGGCGATCCGAGTACCTT GCCAAATCTCCTCGAAGCCCTTCTCAACGATCCAGACCCTGTCGTTCAGGGATCAGCGGCAGGAGCTATGGCGATTTTTG GTGCCGATGCAGTAGAGCTCCTGCTAGAGGTCCTCATCAATCCCAACAGCACAGCAATGCAATGTGGATTCGCTAGCTGG GGGCTGGCCTTTGTGGGAGCTCAAGCACCTGATGCTCTTCGCAATGCAGCCCAATCCGACCATGCAGAAATTAGAGCGGC AGCCATCGCCGGCCTGGGGGAACAAATACAAGCCTTGGGTGATACAGATGCTCGAGAGCTTCTCCTAGAAGCTTTAGTTG ACCCTGCCAGCGATGTGCGTGCTGAAGCAACCATATTGCTTGGCAAGCTACACGAACCATCCTGGGCACAGCCAATGTTA TTGGCCAGGCTCGATGATTTACACCCTCAAGTCCGAAAGAATGCAGCCTTATCTCTAATGAAACTGAAGGCAACGGAAAC ACTCAATAAACTGCTTACAAGAAAGTCTGCAGAACAAGATGAAAGCGTCAATAAGGTTTTGCAGCTCGCAATTGATCAGC TTTCGCACGAAGATCTAAAGAAACATAATGATGAAAGCTAG
Upstream 100 bases:
>100_bases ATAAGGGCCTTAACCGTTAAAACAGTGGATCCGTTGATCTCTCGACTCTAGTCATTACCTTGCTCACATCGATAATGCAT GCATTCTCAAGTCGACAACA
Downstream 100 bases:
>100_bases TCATTATTGAGTGCTGGGCTTGCCTGCATTACGTTGCTCAAATGTATTGAGAGCATCAATCACGCTCCCTCCCAACAAAT CATCAATTAAATCGTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTQDHPFSINTDESLLNEDEAAELADELKAMLRRGDTPKADAEQIQRMVSGLGDHRGLLRRTFAESLGVVGKAAVPALCV ALHKHSSATVRRAAAKTLKLVGDPSTLPNLLEALLNDPDPVVQGSAAGAMAIFGADAVELLLEVLINPNSTAMQCGFASW GLAFVGAQAPDALRNAAQSDHAEIRAAAIAGLGEQIQALGDTDARELLLEALVDPASDVRAEATILLGKLHEPSWAQPML LARLDDLHPQVRKNAALSLMKLKATETLNKLLTRKSAEQDESVNKVLQLAIDQLSHEDLKKHNDES
Sequences:
>Translated_306_residues MTQDHPFSINTDESLLNEDEAAELADELKAMLRRGDTPKADAEQIQRMVSGLGDHRGLLRRTFAESLGVVGKAAVPALCV ALHKHSSATVRRAAAKTLKLVGDPSTLPNLLEALLNDPDPVVQGSAAGAMAIFGADAVELLLEVLINPNSTAMQCGFASW GLAFVGAQAPDALRNAAQSDHAEIRAAAIAGLGEQIQALGDTDARELLLEALVDPASDVRAEATILLGKLHEPSWAQPML LARLDDLHPQVRKNAALSLMKLKATETLNKLLTRKSAEQDESVNKVLQLAIDQLSHEDLKKHNDES >Mature_305_residues TQDHPFSINTDESLLNEDEAAELADELKAMLRRGDTPKADAEQIQRMVSGLGDHRGLLRRTFAESLGVVGKAAVPALCVA LHKHSSATVRRAAAKTLKLVGDPSTLPNLLEALLNDPDPVVQGSAAGAMAIFGADAVELLLEVLINPNSTAMQCGFASWG LAFVGAQAPDALRNAAQSDHAEIRAAAIAGLGEQIQALGDTDARELLLEALVDPASDVRAEATILLGKLHEPSWAQPMLL ARLDDLHPQVRKNAALSLMKLKATETLNKLLTRKSAEQDESVNKVLQLAIDQLSHEDLKKHNDES
Specific function: An enzyme involved in the biosynthesis of bilin [H]
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpcE/RpcE/PecE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004155 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32707; Mature: 32575
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDHPFSINTDESLLNEDEAAELADELKAMLRRGDTPKADAEQIQRMVSGLGDHRGLLR CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHH RTFAESLGVVGKAAVPALCVALHKHSSATVRRAAAKTLKLVGDPSTLPNLLEALLNDPDP HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC VVQGSAAGAMAIFGADAVELLLEVLINPNSTAMQCGFASWGLAFVGAQAPDALRNAAQSD CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH HAEIRAAAIAGLGEQIQALGDTDARELLLEALVDPASDVRAEATILLGKLHEPSWAQPML HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH LARLDDLHPQVRKNAALSLMKLKATETLNKLLTRKSAEQDESVNKVLQLAIDQLSHEDLK HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KHNDES HCCCCC >Mature Secondary Structure TQDHPFSINTDESLLNEDEAAELADELKAMLRRGDTPKADAEQIQRMVSGLGDHRGLLR CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHH RTFAESLGVVGKAAVPALCVALHKHSSATVRRAAAKTLKLVGDPSTLPNLLEALLNDPDP HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC VVQGSAAGAMAIFGADAVELLLEVLINPNSTAMQCGFASWGLAFVGAQAPDALRNAAQSD CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH HAEIRAAAIAGLGEQIQALGDTDARELLLEALVDPASDVRAEATILLGKLHEPSWAQPML HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH LARLDDLHPQVRKNAALSLMKLKATETLNKLLTRKSAEQDESVNKVLQLAIDQLSHEDLK HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KHNDES HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8425055; 8419325 [H]