Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863913

Identifier: 33863913

GI number: 33863913

Start: 1747107

End: 1748051

Strand: Reverse

Name: 33863913

Synonym: PMT1646

Alternate gene names: NA

Gene position: 1748051-1747107 (Counterclockwise)

Preceding gene: 33863915

Following gene: 33863912

Centisome position: 72.51

GC content: 50.79

Gene sequence:

>945_bases
ATGCCAAGCGTGGAGCTTCGTTGGAAACGTTGGGCTAGATGGTTGGTCGCAAGTTTGTGGCGGGCTTACCTTCGCTGGAT
ACGTTGTGATTGTGTAGATCTTAGTGCTGCTTTTGCTTATTACACGTTGCAGTCATTTTTCCCAATTCTGTTGATCTCGC
TGTCTGTGGCCTCTTGGTTTCTTGGCCGTCAGCATGGTCTTGATCAGCAAATTGTTGACTTTACTGCGCAGGTTCTCCCA
CCTTCTGTTGTTGGTTTGGTGGAATCAACATTGGTCAAACTTGTCAAACAAGGCTTTGGTGCAGGATTGCTCGGAGCTGT
TTTTCTGATGGTGACTGCAGGTAACGCCTATTTAACTTTGCAGCGTGGTGCTGATCGTCTTTGGCGAGACCTGTTGCCCC
TGCCTTCAACACCTGCACCATTTGTTGTTCAGCTAACCCGCTTCCTGCGTGCTCGAATTGAGGCTTTTGTGGTCGTGATC
CTGGTCGGGCTGCTTGTTGTTGTTGATCAGATCAGCGTCAATCTACGCATTATCCCAGGTGCTGTTTGGGATGAGCTGAT
TCGCACGACACCATGGCTTGCCGCTTTGTTGTCTCGAGTGCCTGTGCTTCAGGTAGGTCAGTTCGTTGTGCCATTACTCG
GTCTCTCTGGGATGGCGTTGTTGTTGCAGGCTTTGCTACCTAGTAGACGTGTCCCACTCAGGCCTCTTGTCCCTGGGTCT
TTTTTGATTGGTACGCTTTTGACGATCCTCAACCTGGTTGTTAGCCGCAGCATTCTTTCGCTGGGCACGCGTTATCAGGC
TTATGGCTTCATCGGTGGTGTTCTGGTGCTCACCTTTTGGGTTTGGATGGTCGGTGTGATCCTTTACTTTGGGCAGTGCT
GGAGCGTGGTTCTTGCCAGTAGGAGTCGGCATCAATGGGGAGAACCGAACCCGCTAAAAAGCTGA

Upstream 100 bases:

>100_bases
CTTTTTTGATGGCTAAGTCAGTGTGATTTTTAAAGAAGATAATCAAATAGACACCTGAGGTCTTTGATTGGCTGGCGCTA
GCGTTATTAGCAGTAGATGA

Downstream 100 bases:

>100_bases
TTTCACAACGTCTTCAGTCAGCATAAAATTGATTTTTAATTGATTGTTGTGCCTTCTCTGATGCGAGCACGCTCTGCCCG
GTTGCCGCCGGCCTTTGCAG

Product: serum resistance locus BrkB-like protein

Products: NA

Alternate protein names: Ribonuclease BN; Ribonuclease BN-Like Family Protein; YihY Family Protein; Serum Resistance Locus BrkB-Like; Serum Resistance Locus BrkB

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQVLP
PSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVI
LVGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS
FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHQWGEPNPLKS

Sequences:

>Translated_314_residues
MPSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQVLP
PSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVI
LVGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS
FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHQWGEPNPLKS
>Mature_313_residues
PSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQVLPP
SVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVIL
VGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGSF
LIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHQWGEPNPLKS

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34985; Mature: 34854

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRQHGLDQQIVDFTAQVLPPSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTL
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE
QRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVILVGLLVVVDQISVNLRIIPG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECH
AVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHH
FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLAS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRHQWGEPNPLKS
HHHCCCCCCCCCCC
>Mature Secondary Structure 
PSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRQHGLDQQIVDFTAQVLPPSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTL
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE
QRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVILVGLLVVVDQISVNLRIIPG
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECH
AVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHH
FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLAS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRHQWGEPNPLKS
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA