| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863913
Identifier: 33863913
GI number: 33863913
Start: 1747107
End: 1748051
Strand: Reverse
Name: 33863913
Synonym: PMT1646
Alternate gene names: NA
Gene position: 1748051-1747107 (Counterclockwise)
Preceding gene: 33863915
Following gene: 33863912
Centisome position: 72.51
GC content: 50.79
Gene sequence:
>945_bases ATGCCAAGCGTGGAGCTTCGTTGGAAACGTTGGGCTAGATGGTTGGTCGCAAGTTTGTGGCGGGCTTACCTTCGCTGGAT ACGTTGTGATTGTGTAGATCTTAGTGCTGCTTTTGCTTATTACACGTTGCAGTCATTTTTCCCAATTCTGTTGATCTCGC TGTCTGTGGCCTCTTGGTTTCTTGGCCGTCAGCATGGTCTTGATCAGCAAATTGTTGACTTTACTGCGCAGGTTCTCCCA CCTTCTGTTGTTGGTTTGGTGGAATCAACATTGGTCAAACTTGTCAAACAAGGCTTTGGTGCAGGATTGCTCGGAGCTGT TTTTCTGATGGTGACTGCAGGTAACGCCTATTTAACTTTGCAGCGTGGTGCTGATCGTCTTTGGCGAGACCTGTTGCCCC TGCCTTCAACACCTGCACCATTTGTTGTTCAGCTAACCCGCTTCCTGCGTGCTCGAATTGAGGCTTTTGTGGTCGTGATC CTGGTCGGGCTGCTTGTTGTTGTTGATCAGATCAGCGTCAATCTACGCATTATCCCAGGTGCTGTTTGGGATGAGCTGAT TCGCACGACACCATGGCTTGCCGCTTTGTTGTCTCGAGTGCCTGTGCTTCAGGTAGGTCAGTTCGTTGTGCCATTACTCG GTCTCTCTGGGATGGCGTTGTTGTTGCAGGCTTTGCTACCTAGTAGACGTGTCCCACTCAGGCCTCTTGTCCCTGGGTCT TTTTTGATTGGTACGCTTTTGACGATCCTCAACCTGGTTGTTAGCCGCAGCATTCTTTCGCTGGGCACGCGTTATCAGGC TTATGGCTTCATCGGTGGTGTTCTGGTGCTCACCTTTTGGGTTTGGATGGTCGGTGTGATCCTTTACTTTGGGCAGTGCT GGAGCGTGGTTCTTGCCAGTAGGAGTCGGCATCAATGGGGAGAACCGAACCCGCTAAAAAGCTGA
Upstream 100 bases:
>100_bases CTTTTTTGATGGCTAAGTCAGTGTGATTTTTAAAGAAGATAATCAAATAGACACCTGAGGTCTTTGATTGGCTGGCGCTA GCGTTATTAGCAGTAGATGA
Downstream 100 bases:
>100_bases TTTCACAACGTCTTCAGTCAGCATAAAATTGATTTTTAATTGATTGTTGTGCCTTCTCTGATGCGAGCACGCTCTGCCCG GTTGCCGCCGGCCTTTGCAG
Product: serum resistance locus BrkB-like protein
Products: NA
Alternate protein names: Ribonuclease BN; Ribonuclease BN-Like Family Protein; YihY Family Protein; Serum Resistance Locus BrkB-Like; Serum Resistance Locus BrkB
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQVLP PSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVI LVGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHQWGEPNPLKS
Sequences:
>Translated_314_residues MPSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQVLP PSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVI LVGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHQWGEPNPLKS >Mature_313_residues PSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQVLPP SVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVIL VGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGSF LIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHQWGEPNPLKS
Specific function: Unknown
COG id: COG1295
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34985; Mature: 34854
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRQHGLDQQIVDFTAQVLPPSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTL HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE QRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVILVGLLVVVDQISVNLRIIPG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECH AVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHH FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLAS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRHQWGEPNPLKS HHHCCCCCCCCCCC >Mature Secondary Structure PSVELRWKRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRQHGLDQQIVDFTAQVLPPSVVGLVESTLVKLVKQGFGAGLLGAVFLMVTAGNAYLTL HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE QRGADRLWRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVILVGLLVVVDQISVNLRIIPG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECH AVWDELIRTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGS HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHH FLIGTLLTILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLAS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRHQWGEPNPLKS HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA