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The map label for this gene is ydiF [H]

Identifier: 33863902

GI number: 33863902

Start: 1735523

End: 1737247

Strand: Direct

Name: ydiF [H]

Synonym: PMT1635

Alternate gene names: 33863902

Gene position: 1735523-1737247 (Clockwise)

Preceding gene: 33863900

Following gene: 33863904

Centisome position: 71.99

GC content: 53.68

Gene sequence:

>1725_bases
GTGCTGCGACTTGAGCACGTCAACAAGGTCTACCCCACGCATGAAGTCCTCAAGGATGTCACCTGGGAAATCAAGCCCGG
AGACCGAATCGGACTGGTAGGTGTCAATGGGGCTGGCAAATCCACACAGCTCAAATTAATCGCGGGACTCGAAGAAGCCA
GCAGTGGCCAGATTGTGCGCCAGGGGAACCCACGCATCGCCTACTTACAGCAAGAGTTTGATGTTGATCCCTGCCGCACA
GTGCGAGAAGAGCTCTTTCAAGCCTTTGGTGAGGCCGCTGCCGTTGTCCATCAACAGCGACTCGTAGAAACCGCCATGGC
TACAAAGCGGGCTGCAGAAGACAGCGTTTTTCTCGACAGCCTGATCAAAGACCTAAGCCGTTTACAGAATTGCTTTGAAG
CCCTACACGGCTATGAGCTTGAGGCTCGAATCGAAAAACTACTGCCAACACTCCATTTCACATCAGATGGGGCCGATAAA
CGGGTAGGGGACTATTCCGGGGGATGGCAAATGCGAATTGCTCTCGGCAAGATCCTTCTTCAAGATCCTGATCTGCTCCT
GCTCGACGAGCCCACAAACCATCTGGACGTAGACACCATCCAGTGGTTGGAGGACTATCTGCTCAAACAGACCGCCGCCA
TGGTTGTAATCAGCCACGACCGGACGTTCCTCGATCGGATCTGTACCCAAATCGTGATTACTGAGAGAGGCATTTCGCGC
ACCTATCTCGGTAACTACACAGCACATCTTGAACAGAAGGCACTCGAAGAGGAAGCAACTCAAGCTGCGTTTGAACGCCA
GCAGAAAGATCTCGCCGCCCAACAGGCCTATGTCGATCGATTCAGGGCAAGTGCCACGCGCAGCACCCAAGCCAAAAGCC
GAGAGAAACTCCTCGAGAAAGTAGAGCGAATCGAAGCTCCAGTTAAGAGTGTCAGCGGCCCCAGCTTTCGCTTCCCAGAC
GCTCCACGATCCGGCCGACAGGTGGCTGTGATCGAAGACCTCAGCCACAGCTACGGAGACAAGATTCTCTTCCTAGGCGC
CCATCTGGAGGTGGAACCCGGCGATCGGATTGCTTTCATAGGCCCCAACGGCGCAGGCAAATCCACTCTGCTGCGTCTGA
TCATGGGCTTGGAAGCTGCCGATGACGGCAGGGCTTCCCTCGGAGAACACAACGTGATAGCTGGCTATTTCGAACAGAAC
CAAGCAGAAGCTCTGGACCTGCAGAAAACCGTCATCGACACAATGTTTGAAGCCGTCCCGGACTGGACCCAAACCCAGGT
GCGCTCTCTACTCGGCAGTTTCTGCTTGAGTAATGATGCTGTTTTCAAAAACGTCGAAAATCTCAGTGGTGGAGAAAAGG
CTCGCTTAGCCCTAGCCCTAATGCTGGTCAAACCCTGCAATTTGCTGTTACTCGACGAACCAACAAACCACCTCGACATC
CCTGCCAAACAGATGCTGGAGGACGCACTGCAGGCTTACGAAGGCGCCGTCCTGCTGGTCTCTCATGATCGCTACTTCAT
TTCCCGTGTAGCCAATCGCATCGTGGAATTACGCGATGGCGAACTGATTCTTTACCGAGGCAACTACGCTTATTTCCAGG
AAAAAAAATCAGAGGAACAAGCCGCAGCCGCTGCAGCATTGGCCCTGGCAGAAAAAGAAGTCAAGCGCTTAGCCAATCGC
GATCGCCAAAGAAAGCGTCAAGCCAGAAAAAAAGGCGCGGCTTAA

Upstream 100 bases:

>100_bases
AATTTGTTCGAATTTCACCATGGCCGGTGATCCGGAATGGATATCCTCCAGTCTGCCCGTATACGAAGCGGGATGATGTT
CTTGCGGTTGCTTTCCCTCG

Downstream 100 bases:

>100_bases
ACCCAAAATCTATCCGTTTGGCAAAAAAACTTTAAAGAAGGTTAGGCAGGAAGACTCATTTTCCTTTGAGCACAGCAAAT
ATGTGCATAAGCTAACTTCA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MLRLEHVNKVYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVRQGNPRIAYLQQEFDVDPCRT
VREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDSLIKDLSRLQNCFEALHGYELEARIEKLLPTLHFTSDGADK
RVGDYSGGWQMRIALGKILLQDPDLLLLDEPTNHLDVDTIQWLEDYLLKQTAAMVVISHDRTFLDRICTQIVITERGISR
TYLGNYTAHLEQKALEEEATQAAFERQQKDLAAQQAYVDRFRASATRSTQAKSREKLLEKVERIEAPVKSVSGPSFRFPD
APRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFIGPNGAGKSTLLRLIMGLEAADDGRASLGEHNVIAGYFEQN
QAEALDLQKTVIDTMFEAVPDWTQTQVRSLLGSFCLSNDAVFKNVENLSGGEKARLALALMLVKPCNLLLLDEPTNHLDI
PAKQMLEDALQAYEGAVLLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQAAAAAALALAEKEVKRLANR
DRQRKRQARKKGAA

Sequences:

>Translated_574_residues
MLRLEHVNKVYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVRQGNPRIAYLQQEFDVDPCRT
VREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDSLIKDLSRLQNCFEALHGYELEARIEKLLPTLHFTSDGADK
RVGDYSGGWQMRIALGKILLQDPDLLLLDEPTNHLDVDTIQWLEDYLLKQTAAMVVISHDRTFLDRICTQIVITERGISR
TYLGNYTAHLEQKALEEEATQAAFERQQKDLAAQQAYVDRFRASATRSTQAKSREKLLEKVERIEAPVKSVSGPSFRFPD
APRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFIGPNGAGKSTLLRLIMGLEAADDGRASLGEHNVIAGYFEQN
QAEALDLQKTVIDTMFEAVPDWTQTQVRSLLGSFCLSNDAVFKNVENLSGGEKARLALALMLVKPCNLLLLDEPTNHLDI
PAKQMLEDALQAYEGAVLLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQAAAAAALALAEKEVKRLANR
DRQRKRQARKKGAA
>Mature_574_residues
MLRLEHVNKVYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVRQGNPRIAYLQQEFDVDPCRT
VREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDSLIKDLSRLQNCFEALHGYELEARIEKLLPTLHFTSDGADK
RVGDYSGGWQMRIALGKILLQDPDLLLLDEPTNHLDVDTIQWLEDYLLKQTAAMVVISHDRTFLDRICTQIVITERGISR
TYLGNYTAHLEQKALEEEATQAAFERQQKDLAAQQAYVDRFRASATRSTQAKSREKLLEKVERIEAPVKSVSGPSFRFPD
APRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFIGPNGAGKSTLLRLIMGLEAADDGRASLGEHNVIAGYFEQN
QAEALDLQKTVIDTMFEAVPDWTQTQVRSLLGSFCLSNDAVFKNVENLSGGEKARLALALMLVKPCNLLLLDEPTNHLDI
PAKQMLEDALQAYEGAVLLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQAAAAAALALAEKEVKRLANR
DRQRKRQARKKGAA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=31.214953271028, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=32.8301886792453, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=32.8301886792453, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=28.8135593220339, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI69354671, Length=506, Percent_Identity=29.4466403162055, Blast_Score=179, Evalue=8e-45,
Organism=Escherichia coli, GI1789751, Length=569, Percent_Identity=36.9068541300527, Blast_Score=315, Evalue=4e-87,
Organism=Escherichia coli, GI2367384, Length=556, Percent_Identity=34.8920863309352, Blast_Score=302, Evalue=5e-83,
Organism=Escherichia coli, GI1787041, Length=551, Percent_Identity=33.0308529945554, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI1787182, Length=543, Percent_Identity=36.279926335175, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1789672, Length=248, Percent_Identity=27.8225806451613, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1790190, Length=577, Percent_Identity=21.1438474870017, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1789891, Length=234, Percent_Identity=26.4957264957265, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081791, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI145693107, Length=606, Percent_Identity=22.4422442244224, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787370, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787029, Length=245, Percent_Identity=24.8979591836735, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787089, Length=246, Percent_Identity=25.609756097561, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789873, Length=222, Percent_Identity=30.6306306306306, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082268, Length=236, Percent_Identity=27.5423728813559, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=23.1111111111111, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788225, Length=238, Percent_Identity=25.2100840336134, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=27.0588235294118, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=26.0330578512397, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=30.1369863013699, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=261, Percent_Identity=23.7547892720307, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788002, Length=198, Percent_Identity=31.3131313131313, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=31.3432835820896, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788644, Length=241, Percent_Identity=29.4605809128631, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788450, Length=243, Percent_Identity=26.3374485596708, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=25.974025974026, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787712, Length=224, Percent_Identity=25.4464285714286, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786872, Length=203, Percent_Identity=27.0935960591133, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=34.8794063079777, Blast_Score=255, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17559834, Length=530, Percent_Identity=30.377358490566, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17555318, Length=553, Percent_Identity=30.0180831826401, Blast_Score=227, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17511077, Length=330, Percent_Identity=24.2424242424242, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=258, Percent_Identity=27.5193798449612, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=271, Percent_Identity=25.830258302583, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569143, Length=246, Percent_Identity=27.6422764227642, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=336, Percent_Identity=24.702380952381, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=248, Percent_Identity=25.8064516129032, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=259, Percent_Identity=25.4826254826255, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=532, Percent_Identity=31.015037593985, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6320874, Length=546, Percent_Identity=31.1355311355311, Blast_Score=229, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6325030, Length=400, Percent_Identity=29.25, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=377, Percent_Identity=28.9124668435013, Blast_Score=123, Evalue=7e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=380, Percent_Identity=29.7368421052632, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24666836, Length=535, Percent_Identity=32.5233644859813, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI24642252, Length=509, Percent_Identity=33.3988212180747, Blast_Score=238, Evalue=6e-63,
Organism=Drosophila melanogaster, GI18859989, Length=509, Percent_Identity=33.3988212180747, Blast_Score=238, Evalue=6e-63,
Organism=Drosophila melanogaster, GI24641342, Length=526, Percent_Identity=29.8479087452471, Blast_Score=226, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24659289, Length=205, Percent_Identity=29.7560975609756, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 64090; Mature: 64090

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLEHVNKVYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVR
CCCHHHHHHCCCHHHHHHHCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
QGNPRIAYLQQEFDVDPCRTVREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDS
CCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKDLSRLQNCFEALHGYELEARIEKLLPTLHFTSDGADKRVGDYSGGWQMRIALGKILL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEHHHHHC
QDPDLLLLDEPTNHLDVDTIQWLEDYLLKQTAAMVVISHDRTFLDRICTQIVITERGISR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCH
TYLGNYTAHLEQKALEEEATQAAFERQQKDLAAQQAYVDRFRASATRSTQAKSREKLLEK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERIEAPVKSVSGPSFRFPDAPRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFI
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEEEEEECCCCEEEEE
GPNGAGKSTLLRLIMGLEAADDGRASLGEHNVIAGYFEQNQAEALDLQKTVIDTMFEAVP
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCC
DWTQTQVRSLLGSFCLSNDAVFKNVENLSGGEKARLALALMLVKPCNLLLLDEPTNHLDI
CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC
PAKQMLEDALQAYEGAVLLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQ
CHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHH
AAAAAALALAEKEVKRLANRDRQRKRQARKKGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRLEHVNKVYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVR
CCCHHHHHHCCCHHHHHHHCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
QGNPRIAYLQQEFDVDPCRTVREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDS
CCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKDLSRLQNCFEALHGYELEARIEKLLPTLHFTSDGADKRVGDYSGGWQMRIALGKILL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEHHHHHC
QDPDLLLLDEPTNHLDVDTIQWLEDYLLKQTAAMVVISHDRTFLDRICTQIVITERGISR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCH
TYLGNYTAHLEQKALEEEATQAAFERQQKDLAAQQAYVDRFRASATRSTQAKSREKLLEK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERIEAPVKSVSGPSFRFPDAPRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFI
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEEEEEECCCCEEEEE
GPNGAGKSTLLRLIMGLEAADDGRASLGEHNVIAGYFEQNQAEALDLQKTVIDTMFEAVP
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCC
DWTQTQVRSLLGSFCLSNDAVFKNVENLSGGEKARLALALMLVKPCNLLLLDEPTNHLDI
CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC
PAKQMLEDALQAYEGAVLLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQ
CHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHH
AAAAAALALAEKEVKRLANRDRQRKRQARKKGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]